RNA–Protein interactions for RNA: ENST00000476716.5

USP34-212, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 4

Gene USP34, Length 606 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-212ENST00000476716 SPRYD3Q8NCJ5 442 aa11.65□□□□□ -0.54
USP34-212ENST00000476716 DPYSL4O14531 572 aa11.64□□□□□ -0.55
USP34-212ENST00000476716 CAMK2BQ13554 666 aa11.64□□□□□ -0.55
USP34-212ENST00000476716 PLCB2Q00722 1185 aa11.63□□□□□ -0.55
USP34-212ENST00000476716 PAXIP1Q6ZW49 1069 aaPredicted RBP11.63□□□□□ -0.55
USP34-212ENST00000476716 RABGEF1Q9UJ41 708 aa11.62□□□□□ -0.55
USP34-212ENST00000476716 CFAP44Q96MT7 982 aa11.61□□□□□ -0.55
USP34-212ENST00000476716 EPAS1Q99814 870 aa11.61□□□□□ -0.55
USP34-212ENST00000476716 PROX2Q3B8N5 592 aa11.6□□□□□ -0.55
USP34-212ENST00000476716 COL9A1P20849 921 aa11.59□□□□□ -0.55
USP34-212ENST00000476716 ANKK1Q8NFD2 765 aa11.58□□□□□ -0.56
USP34-212ENST00000476716 C6orf132Q5T0Z8 1188 aa11.57□□□□□ -0.56
USP34-212ENST00000476716 DDX12PQ92771 950 aa11.55□□□□□ -0.56
USP34-212ENST00000476716 RBM33Q96EV2 1170 aaKnown RBP11.55□□□□□ -0.56
USP34-212ENST00000476716 LAPTM4BQ86VI4 370 aa11.54□□□□□ -0.56
USP34-212ENST00000476716 KIAA1468Q9P260 1216 aa11.53□□□□□ -0.56
USP34-212ENST00000476716 ONECUT3O60422 494 aaPredicted RBP11.51□□□□□ -0.57
USP34-212ENST00000476716 WDR70Q9NW82 654 aa11.51□□□□□ -0.57
USP34-212ENST00000476716 NBR1Q14596 966 aa11.5□□□□□ -0.57
USP34-212ENST00000476716 IFFO2Q5TF58 517 aa11.5□□□□□ -0.57
USP34-212ENST00000476716 ZFRQ96KR1 1074 aaKnown RBP11.49□□□□□ -0.57
USP34-212ENST00000476716 SPDYE16A6NNV3 312 aaPredicted RBP11.48□□□□□ -0.57
USP34-212ENST00000476716 TRIM6-TRIM34B2RNG4 842 aa11.48□□□□□ -0.57
USP34-212ENST00000476716 MAP3K7O43318 606 aa11.48□□□□□ -0.57
USP34-212ENST00000476716 BCAMP50895 628 aa11.48□□□□□ -0.57
USP34-212ENST00000476716 PDIA6Q15084 440 aa11.48□□□□□ -0.57
USP34-212ENST00000476716 E2F4Q16254 413 aa11.47□□□□□ -0.57
USP34-212ENST00000476716 SEPT9Q9UHD8 586 aaPredicted RBP11.47□□□□□ -0.57
USP34-212ENST00000476716 SOWAHBA6NEL2 793 aa11.46□□□□□ -0.57
USP34-212ENST00000476716 EN1Q05925 392 aaPredicted RBP11.46□□□□□ -0.57
USP34-212ENST00000476716 FAM98CQ17RN3 349 aaKnown RBP11.44□□□□□ -0.58
USP34-212ENST00000476716 NYAP1Q6ZVC0 841 aa11.44□□□□□ -0.58
USP34-212ENST00000476716 PACS2Q86VP3 889 aa11.44□□□□□ -0.58
USP34-212ENST00000476716 RGS20O76081 388 aa11.43□□□□□ -0.58
USP34-212ENST00000476716 A0A0G2JS52 829 aa11.42□□□□□ -0.58
USP34-212ENST00000476716 HAP1P54257 671 aaPredicted RBP11.42□□□□□ -0.58
USP34-212ENST00000476716 TSR1Q2NL82 804 aaKnown RBP11.42□□□□□ -0.58
USP34-212ENST00000476716 LRCH3Q96II8 777 aa11.41□□□□□ -0.58
USP34-212ENST00000476716 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.41□□□□□ -0.58
USP34-212ENST00000476716 GRXCR2A6NFK2 248 aa11.4□□□□□ -0.58
USP34-212ENST00000476716 WBP1LQ9NX94 342 aa11.4□□□□□ -0.58
USP34-212ENST00000476716 TSHZ2Q9NRE2 1034 aa11.39□□□□□ -0.59
USP34-212ENST00000476716 ITGBL1O95965 494 aaPredicted RBP11.37□□□□□ -0.59
USP34-212ENST00000476716 CERKQ8TCT0 537 aa11.37□□□□□ -0.59
USP34-212ENST00000476716 TSR3Q9UJK0 312 aaKnown RBP11.37□□□□□ -0.59
USP34-212ENST00000476716 TSKSQ9UJT2 592 aa11.37□□□□□ -0.59
USP34-212ENST00000476716 HPS5Q9UPZ3 1129 aa11.37□□□□□ -0.59
USP34-212ENST00000476716 CDCA7LQ96GN5 454 aa11.35□□□□□ -0.59
USP34-212ENST00000476716 ARIH1Q9Y4X5 557 aaPredicted RBP11.35□□□□□ -0.59
USP34-212ENST00000476716 SLC24A1O60721 1099 aa11.34□□□□□ -0.59
USP34-212ENST00000476716 PRSS12P56730 875 aa11.34□□□□□ -0.59
USP34-212ENST00000476716 KCNC4Q03721 635 aa11.34□□□□□ -0.59
USP34-212ENST00000476716 IRX2Q9BZI1 471 aaPredicted RBP11.33□□□□□ -0.6
USP34-212ENST00000476716 PPP4CP60510 307 aa11.31□□□□□ -0.6
USP34-212ENST00000476716 NBPF26B4DH59 902 aa11.3□□□□□ -0.6
USP34-212ENST00000476716 SMAPO00193 183 aa11.3□□□□□ -0.6
USP34-212ENST00000476716 HDGFP51858 240 aaKnown RBP11.28□□□□□ -0.6
USP34-212ENST00000476716 SAMD7Q7Z3H4 446 aa11.28□□□□□ -0.6
USP34-212ENST00000476716 PNMA3Q9UL41 463 aa11.28□□□□□ -0.6
USP34-212ENST00000476716 OSBPP22059 807 aa11.27□□□□□ -0.61
USP34-212ENST00000476716 PRIM1P49642 420 aaKnown RBP11.27□□□□□ -0.61
USP34-212ENST00000476716 VSIG10Q8N0Z9 540 aa11.27□□□□□ -0.61
USP34-212ENST00000476716 TATDN2Q93075 761 aa11.27□□□□□ -0.61
USP34-212ENST00000476716 CDHR5Q9HBB8 845 aa11.25□□□□□ -0.61
USP34-212ENST00000476716 RNF40O75150 1001 aa11.24□□□□□ -0.61
USP34-212ENST00000476716 FAM198AQ9UFP1 575 aa11.24□□□□□ -0.61
USP34-212ENST00000476716 RBM27Q9P2N5 1060 aaKnown RBP11.23□□□□□ -0.61
USP34-212ENST00000476716 NUDT18Q6ZVK8 323 aa11.22□□□□□ -0.61
USP34-212ENST00000476716 KDM2AQ9Y2K7 1162 aa11.19□□□□□ -0.62
USP34-212ENST00000476716 C3orf80F5H4A9 247 aa11.18□□□□□ -0.62
USP34-212ENST00000476716 NECTIN2Q92692 538 aa11.18□□□□□ -0.62
USP34-212ENST00000476716 SLC4A3P48751 1232 aa11.16□□□□□ -0.62
USP34-212ENST00000476716 PADI6Q6TGC4 694 aa11.16□□□□□ -0.62
USP34-212ENST00000476716 ARHGEF1Q92888 912 aaKnown RBP11.16□□□□□ -0.62
USP34-212ENST00000476716 TJAP1Q5JTD0 557 aa11.15□□□□□ -0.62
USP34-212ENST00000476716 IL21Q9HBE4 155 aa11.15□□□□□ -0.62
USP34-212ENST00000476716 MTRQ99707 1265 aa11.14□□□□□ -0.63
USP34-212ENST00000476716 SLF2Q8IX21 1173 aa11.13□□□□□ -0.63
USP34-212ENST00000476716 TTC13Q8NBP0 860 aa11.12□□□□□ -0.63
USP34-212ENST00000476716 NPDC1Q9NQX5 325 aaPredicted RBP11.12□□□□□ -0.63
USP34-212ENST00000476716 SWT1Q5T5J6 900 aaKnown RBP11.11□□□□□ -0.63
USP34-212ENST00000476716 MLLT3P42568 568 aaPredicted RBP11.1□□□□□ -0.63
USP34-212ENST00000476716 Q6ZNB5 142 aa11.1□□□□□ -0.63
USP34-212ENST00000476716 P3H3Q8IVL6 736 aa11.1□□□□□ -0.63
USP34-212ENST00000476716 KCNV2Q8TDN2 545 aa11.1□□□□□ -0.63
USP34-212ENST00000476716 APLP1P51693 650 aa11.09□□□□□ -0.63
USP34-212ENST00000476716 LAPTM4AQ15012 233 aa11.06□□□□□ -0.64
USP34-212ENST00000476716 PPP1R18Q6NYC8 613 aa11.06□□□□□ -0.64
USP34-212ENST00000476716 ZNF516Q92618 1163 aa11.06□□□□□ -0.64
USP34-212ENST00000476716 PRR14Q9BWN1 585 aa11.05□□□□□ -0.64
USP34-212ENST00000476716 PRKD2Q9BZL6 878 aa11.05□□□□□ -0.64
USP34-212ENST00000476716 NUTM2FA1L443 756 aa11.04□□□□□ -0.64
USP34-212ENST00000476716 COPS2P61201 443 aa11.04□□□□□ -0.64
USP34-212ENST00000476716 EYA1Q99502 592 aa11.04□□□□□ -0.64
USP34-212ENST00000476716 GGCXP38435 758 aa11.03□□□□□ -0.64
USP34-212ENST00000476716 PTGDRQ13258 359 aa11.03□□□□□ -0.64
USP34-212ENST00000476716 RBM46Q8TBY0 533 aaKnown RBP11.03□□□□□ -0.64
USP34-212ENST00000476716 GFRA3O60609 400 aa11.02□□□□□ -0.65
USP34-212ENST00000476716 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.02□□□□□ -0.65
USP34-212ENST00000476716 DNAJB2P25686 324 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms