RNA–Protein interactions for RNA: ENST00000476706.5

RBM17-210, Transcript of RNA binding motif protein 17, human

TSL 2

Gene RBM17, Length 927 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM17-210	ENST00000476706	COL9A1	P20849	921 aa		13.84	□□□□□ -0.19
RBM17-210	ENST00000476706	EPAS1	Q99814	870 aa		13.84	□□□□□ -0.19
RBM17-210	ENST00000476706	DPYSL4	O14531	572 aa		13.82	□□□□□ -0.2
RBM17-210	ENST00000476706	PROX2	Q3B8N5	592 aa		13.81	□□□□□ -0.2
RBM17-210	ENST00000476706	ONECUT3	O60422	494 aa	Predicted RBP	13.79	□□□□□ -0.2
RBM17-210	ENST00000476706	LAPTM4B	Q86VI4	370 aa		13.79	□□□□□ -0.2
RBM17-210	ENST00000476706	RGS20	O76081	388 aa		13.77	□□□□□ -0.21
RBM17-210	ENST00000476706	C6orf132	Q5T0Z8	1188 aa		13.77	□□□□□ -0.21
RBM17-210	ENST00000476706	ANKK1	Q8NFD2	765 aa		13.77	□□□□□ -0.21
RBM17-210	ENST00000476706	KIAA1468	Q9P260	1216 aa		13.73	□□□□□ -0.21
RBM17-210	ENST00000476706	PDIA6	Q15084	440 aa		13.71	□□□□□ -0.21
RBM17-210	ENST00000476706		A0A0G2JS52	829 aa		13.7	□□□□□ -0.22
RBM17-210	ENST00000476706	SOWAHB	A6NEL2	793 aa		13.7	□□□□□ -0.22
RBM17-210	ENST00000476706	SPRYD3	Q8NCJ5	442 aa		13.7	□□□□□ -0.22
RBM17-210	ENST00000476706	TRIM6-TRIM34	B2RNG4	842 aa		13.69	□□□□□ -0.22
RBM17-210	ENST00000476706	NYAP1	Q6ZVC0	841 aa		13.69	□□□□□ -0.22
RBM17-210	ENST00000476706	ZFR	Q96KR1	1074 aa	Known RBP	13.69	□□□□□ -0.22
RBM17-210	ENST00000476706	ITGBL1	O95965	494 aa	Predicted RBP	13.68	□□□□□ -0.22
RBM17-210	ENST00000476706	DDX12P	Q92771	950 aa		13.68	□□□□□ -0.22
RBM17-210	ENST00000476706	SPDYE16	A6NNV3	312 aa	Predicted RBP	13.67	□□□□□ -0.22
RBM17-210	ENST00000476706	BCAM	P50895	628 aa		13.66	□□□□□ -0.22
RBM17-210	ENST00000476706	EN1	Q05925	392 aa	Predicted RBP	13.66	□□□□□ -0.22
RBM17-210	ENST00000476706	RBM33	Q96EV2	1170 aa	Known RBP	13.66	□□□□□ -0.22
RBM17-210	ENST00000476706	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.66	□□□□□ -0.22
RBM17-210	ENST00000476706	FAM98C	Q17RN3	349 aa	Known RBP	13.65	□□□□□ -0.22
RBM17-210	ENST00000476706	ARIH1	Q9Y4X5	557 aa	Predicted RBP	13.64	□□□□□ -0.23
RBM17-210	ENST00000476706	NBR1	Q14596	966 aa		13.63	□□□□□ -0.23
RBM17-210	ENST00000476706	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.63	□□□□□ -0.23
RBM17-210	ENST00000476706	SEPT9	Q9UHD8	586 aa	Predicted RBP	13.63	□□□□□ -0.23
RBM17-210	ENST00000476706	MAP3K7	O43318	606 aa		13.6	□□□□□ -0.23
RBM17-210	ENST00000476706	E2F4	Q16254	413 aa		13.6	□□□□□ -0.23
RBM17-210	ENST00000476706	TSR1	Q2NL82	804 aa	Known RBP	13.58	□□□□□ -0.24
RBM17-210	ENST00000476706	WBP1L	Q9NX94	342 aa		13.58	□□□□□ -0.24
RBM17-210	ENST00000476706	PACS2	Q86VP3	889 aa		13.57	□□□□□ -0.24
RBM17-210	ENST00000476706	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	13.56	□□□□□ -0.24
RBM17-210	ENST00000476706	TSKS	Q9UJT2	592 aa		13.56	□□□□□ -0.24
RBM17-210	ENST00000476706	LRCH3	Q96II8	777 aa		13.55	□□□□□ -0.24
RBM17-210	ENST00000476706	TSR3	Q9UJK0	312 aa	Known RBP	13.55	□□□□□ -0.24
RBM17-210	ENST00000476706	CERK	Q8TCT0	537 aa		13.54	□□□□□ -0.24
RBM17-210	ENST00000476706	WDR70	Q9NW82	654 aa		13.52	□□□□□ -0.25
RBM17-210	ENST00000476706	PRSS12	P56730	875 aa		13.51	□□□□□ -0.25
RBM17-210	ENST00000476706	CDCA7L	Q96GN5	454 aa		13.51	□□□□□ -0.25
RBM17-210	ENST00000476706	IRX2	Q9BZI1	471 aa	Predicted RBP	13.51	□□□□□ -0.25
RBM17-210	ENST00000476706	HPS5	Q9UPZ3	1129 aa		13.51	□□□□□ -0.25
RBM17-210	ENST00000476706	KCNC4	Q03721	635 aa		13.5	□□□□□ -0.25
RBM17-210	ENST00000476706	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.5	□□□□□ -0.25
RBM17-210	ENST00000476706	PRIM1	P49642	420 aa	Known RBP	13.48	□□□□□ -0.25
RBM17-210	ENST00000476706	RTN4	Q9NQC3	1192 aa	Known RBP	13.48	□□□□□ -0.25
RBM17-210	ENST00000476706	CFAP44	Q96MT7	982 aa		13.47	□□□□□ -0.25
RBM17-210	ENST00000476706	GRXCR2	A6NFK2	248 aa		13.45	□□□□□ -0.26
RBM17-210	ENST00000476706	RBM27	Q9P2N5	1060 aa	Known RBP	13.45	□□□□□ -0.26
RBM17-210	ENST00000476706	FAM198A	Q9UFP1	575 aa		13.45	□□□□□ -0.26
RBM17-210	ENST00000476706	OSBP	P22059	807 aa		13.44	□□□□□ -0.26
RBM17-210	ENST00000476706	NBPF26	B4DH59	902 aa		13.43	□□□□□ -0.26
RBM17-210	ENST00000476706	PPP4C	P60510	307 aa		13.42	□□□□□ -0.26
RBM17-210	ENST00000476706	SAMD7	Q7Z3H4	446 aa		13.41	□□□□□ -0.26
RBM17-210	ENST00000476706	TATDN2	Q93075	761 aa		13.41	□□□□□ -0.26
RBM17-210	ENST00000476706	SMAP	O00193	183 aa		13.4	□□□□□ -0.26
RBM17-210	ENST00000476706	CDHR5	Q9HBB8	845 aa		13.38	□□□□□ -0.27
RBM17-210	ENST00000476706	PNMA3	Q9UL41	463 aa		13.38	□□□□□ -0.27
RBM17-210	ENST00000476706	C3orf80	F5H4A9	247 aa		13.37	□□□□□ -0.27
RBM17-210	ENST00000476706	TJAP1	Q5JTD0	557 aa		13.34	□□□□□ -0.27
RBM17-210	ENST00000476706	TTC13	Q8NBP0	860 aa		13.34	□□□□□ -0.27
RBM17-210	ENST00000476706	NUDT18	Q6ZVK8	323 aa		13.32	□□□□□ -0.28
RBM17-210	ENST00000476706	NPDC1	Q9NQX5	325 aa	Predicted RBP	13.31	□□□□□ -0.28
RBM17-210	ENST00000476706	HDGF	P51858	240 aa	Known RBP	13.3	□□□□□ -0.28
RBM17-210	ENST00000476706	NECTIN2	Q92692	538 aa		13.29	□□□□□ -0.28
RBM17-210	ENST00000476706	IL21	Q9HBE4	155 aa		13.29	□□□□□ -0.28
RBM17-210	ENST00000476706	MTR	Q99707	1265 aa		13.28	□□□□□ -0.28
RBM17-210	ENST00000476706	PADI6	Q6TGC4	694 aa		13.27	□□□□□ -0.29
RBM17-210	ENST00000476706	ARHGEF1	Q92888	912 aa	Known RBP	13.26	□□□□□ -0.29
RBM17-210	ENST00000476706	APLP1	P51693	650 aa		13.23	□□□□□ -0.29
RBM17-210	ENST00000476706	LAPTM4A	Q15012	233 aa		13.23	□□□□□ -0.29
RBM17-210	ENST00000476706	SLF2	Q8IX21	1173 aa		13.23	□□□□□ -0.29
RBM17-210	ENST00000476706	RNF40	O75150	1001 aa		13.22	□□□□□ -0.29
RBM17-210	ENST00000476706	SWT1	Q5T5J6	900 aa	Known RBP	13.21	□□□□□ -0.29
RBM17-210	ENST00000476706		Q6ZNB5	142 aa		13.2	□□□□□ -0.3
RBM17-210	ENST00000476706	EYA1	Q99502	592 aa		13.2	□□□□□ -0.3
RBM17-210	ENST00000476706	PPP1R18	Q6NYC8	613 aa		13.18	□□□□□ -0.3
RBM17-210	ENST00000476706	KCNV2	Q8TDN2	545 aa		13.18	□□□□□ -0.3
RBM17-210	ENST00000476706	TSHZ2	Q9NRE2	1034 aa		13.18	□□□□□ -0.3
RBM17-210	ENST00000476706	MLLT3	P42568	568 aa	Predicted RBP	13.17	□□□□□ -0.3
RBM17-210	ENST00000476706	SLC4A3	P48751	1232 aa		13.17	□□□□□ -0.3
RBM17-210	ENST00000476706	ZNF516	Q92618	1163 aa		13.17	□□□□□ -0.3
RBM17-210	ENST00000476706		V9GY48	417 aa	Predicted RBP	13.16	□□□□□ -0.3
RBM17-210	ENST00000476706	PRKD2	Q9BZL6	878 aa		13.15	□□□□□ -0.3
RBM17-210	ENST00000476706	PTGDR	Q13258	359 aa		13.14	□□□□□ -0.31
RBM17-210	ENST00000476706	PRR14	Q9BWN1	585 aa		13.14	□□□□□ -0.31
RBM17-210	ENST00000476706	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	13.14	□□□□□ -0.31
RBM17-210	ENST00000476706	GFRA3	O60609	400 aa		13.1	□□□□□ -0.31
RBM17-210	ENST00000476706	DNAJB2	P25686	324 aa		13.09	□□□□□ -0.31
RBM17-210	ENST00000476706	GGCX	P38435	758 aa		13.09	□□□□□ -0.31
RBM17-210	ENST00000476706	COPS2	P61201	443 aa		13.08	□□□□□ -0.32
RBM17-210	ENST00000476706	NKX2-3	Q8TAU0	364 aa		13.08	□□□□□ -0.32
RBM17-210	ENST00000476706	TMUB1	Q9BVT8	246 aa		13.08	□□□□□ -0.32
RBM17-210	ENST00000476706	P3H3	Q8IVL6	736 aa		13.07	□□□□□ -0.32
RBM17-210	ENST00000476706	RBM46	Q8TBY0	533 aa	Known RBP	13.07	□□□□□ -0.32
RBM17-210	ENST00000476706	ADGRG1	Q9Y653	693 aa		13.07	□□□□□ -0.32
RBM17-210	ENST00000476706	NRG2	O14511	850 aa	Predicted RBP	13.06	□□□□□ -0.32
RBM17-210	ENST00000476706	ZPR1	O75312	459 aa		13.06	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms