RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 NUTM2FA1L443 756 aa10.85□□□□□ -0.67
LRCH3-215ENST00000476664 GNPATO15228 680 aa10.85□□□□□ -0.67
LRCH3-215ENST00000476664 KIF13AQ9H1H9 1805 aa10.84□□□□□ -0.67
LRCH3-215ENST00000476664 E9PSI1 815 aa10.84□□□□□ -0.67
LRCH3-215ENST00000476664 PPP1R15AO75807 674 aaPredicted RBP10.84□□□□□ -0.67
LRCH3-215ENST00000476664 FOXD4L5Q5VV16 416 aaPredicted RBP10.84□□□□□ -0.67
LRCH3-215ENST00000476664 FOXD4L4Q8WXT5 416 aaPredicted RBP10.84□□□□□ -0.67
LRCH3-215ENST00000476664 EIF4G3O43432 1585 aaKnown RBP10.83□□□□□ -0.68
LRCH3-215ENST00000476664 PLSCR2Q9NRY7 297 aa10.83□□□□□ -0.68
LRCH3-215ENST00000476664 CCDC61Q9Y6R9 512 aa10.83□□□□□ -0.68
LRCH3-215ENST00000476664 IFT140Q96RY7 1462 aa10.82□□□□□ -0.68
LRCH3-215ENST00000476664 HIC1Q14526 733 aa10.82□□□□□ -0.68
LRCH3-215ENST00000476664 GIGYF2Q6Y7W6 1299 aaKnown RBP10.82□□□□□ -0.68
LRCH3-215ENST00000476664 MS4A4AQ96JQ5 239 aa10.82□□□□□ -0.68
LRCH3-215ENST00000476664 RBM42Q9BTD8 480 aaKnown RBP10.82□□□□□ -0.68
LRCH3-215ENST00000476664 DISP3Q9P2K9 1392 aa10.81□□□□□ -0.68
LRCH3-215ENST00000476664 IRF5Q13568 498 aa10.81□□□□□ -0.68
LRCH3-215ENST00000476664 ACIN1Q9UKV3 1341 aaKnown RBP10.81□□□□□ -0.68
LRCH3-215ENST00000476664 IFNL1Q8IU54 200 aa10.8□□□□□ -0.68
LRCH3-215ENST00000476664 PELP1Q8IZL8 1130 aaKnown RBP10.8□□□□□ -0.68
LRCH3-215ENST00000476664 POM121Q96HA1 1249 aa10.8□□□□□ -0.68
LRCH3-215ENST00000476664 GPHNQ9NQX3 736 aaPredicted RBP10.8□□□□□ -0.68
LRCH3-215ENST00000476664 CLASP1Q7Z460 1538 aa10.79□□□□□ -0.68
LRCH3-215ENST00000476664 MS4A1P11836 297 aa10.79□□□□□ -0.68
LRCH3-215ENST00000476664 FCHSD2O94868 740 aa10.78□□□□□ -0.68
LRCH3-215ENST00000476664 EMILIN3Q9NT22 766 aa10.78□□□□□ -0.68
LRCH3-215ENST00000476664 SYNJ2O15056 1496 aa10.77□□□□□ -0.69
LRCH3-215ENST00000476664 SPDYE5A6NIY4 337 aa10.77□□□□□ -0.69
LRCH3-215ENST00000476664 SKIV2LQ15477 1246 aaKnown RBP10.77□□□□□ -0.69
LRCH3-215ENST00000476664 REM2Q8IYK8 340 aaPredicted RBP10.77□□□□□ -0.69
LRCH3-215ENST00000476664 GAPVD1Q14C86 1478 aa10.76□□□□□ -0.69
LRCH3-215ENST00000476664 ZNF428Q96B54 188 aa10.76□□□□□ -0.69
LRCH3-215ENST00000476664 ZNF330Q9Y3S2 320 aaPredicted RBP10.76□□□□□ -0.69
LRCH3-215ENST00000476664 GRXCR2A6NFK2 248 aa10.74□□□□□ -0.69
LRCH3-215ENST00000476664 ATP1B4Q9UN42 357 aaPredicted RBP10.74□□□□□ -0.69
LRCH3-215ENST00000476664 COG6Q9Y2V7 657 aa10.74□□□□□ -0.69
LRCH3-215ENST00000476664 GOLGA2Q08379 1002 aa10.73□□□□□ -0.69
LRCH3-215ENST00000476664 KCNA1Q09470 495 aa10.73□□□□□ -0.69
LRCH3-215ENST00000476664 WWC1Q8IX03 1113 aa10.72□□□□□ -0.69
LRCH3-215ENST00000476664 AQRO60306 1485 aaKnown RBP eCLIP10.72□□□□□ -0.69
LRCH3-215ENST00000476664 ADGRL1O94910 1474 aa10.72□□□□□ -0.69
LRCH3-215ENST00000476664 KDM6BO15054 1643 aa10.71□□□□□ -0.69
LRCH3-215ENST00000476664 HSP90B1P14625 803 aaKnown RBP10.71□□□□□ -0.69
LRCH3-215ENST00000476664 OXER1Q8TDS5 423 aa10.71□□□□□ -0.69
LRCH3-215ENST00000476664 AMOTL2Q9Y2J4 779 aa10.71□□□□□ -0.69
LRCH3-215ENST00000476664 FECHP22830 423 aa10.7□□□□□ -0.7
LRCH3-215ENST00000476664 PAK3O75914 559 aaPredicted RBP10.69□□□□□ -0.7
LRCH3-215ENST00000476664 CLCN1P35523 988 aa10.69□□□□□ -0.7
LRCH3-215ENST00000476664 BANK1Q8NDB2 785 aa10.69□□□□□ -0.7
LRCH3-215ENST00000476664 CFTRP13569 1480 aa10.68□□□□□ -0.7
LRCH3-215ENST00000476664 BRD1O95696 1058 aa10.68□□□□□ -0.7
LRCH3-215ENST00000476664 FARP1Q9Y4F1 1045 aaPredicted RBP10.68□□□□□ -0.7
LRCH3-215ENST00000476664 MAP3K13O43283 966 aa10.67□□□□□ -0.7
LRCH3-215ENST00000476664 SYNJ1O43426 1573 aa10.67□□□□□ -0.7
LRCH3-215ENST00000476664 CDK11BP21127 795 aaKnown RBP10.66□□□□□ -0.7
LRCH3-215ENST00000476664 OSBPP22059 807 aa10.66□□□□□ -0.7
LRCH3-215ENST00000476664 MYT1Q01538 1121 aa10.66□□□□□ -0.7
LRCH3-215ENST00000476664 CDK11AQ9UQ88 783 aaPredicted RBP10.66□□□□□ -0.7
LRCH3-215ENST00000476664 DSG2Q14126 1118 aa10.65□□□□□ -0.7
LRCH3-215ENST00000476664 CALR3Q96L12 384 aaKnown RBP10.65□□□□□ -0.7
LRCH3-215ENST00000476664 KIF12Q96FN5 646 aa10.64□□□□□ -0.71
LRCH3-215ENST00000476664 REPIN1Q9BWE0 567 aaKnown RBP10.64□□□□□ -0.71
LRCH3-215ENST00000476664 GPCPD1Q9NPB8 672 aa10.64□□□□□ -0.71
LRCH3-215ENST00000476664 USTQ9Y2C2 406 aa10.64□□□□□ -0.71
LRCH3-215ENST00000476664 MROH2BQ7Z745 1585 aa10.64□□□□□ -0.71
LRCH3-215ENST00000476664 PROCA1Q8NCQ7 364 aaPredicted RBP10.63□□□□□ -0.71
LRCH3-215ENST00000476664 PITPNM1O00562 1244 aa10.62□□□□□ -0.71
LRCH3-215ENST00000476664 MAP3K9P80192 1104 aa10.62□□□□□ -0.71
LRCH3-215ENST00000476664 FOXK1P85037 733 aa10.62□□□□□ -0.71
LRCH3-215ENST00000476664 PUS7Q96PZ0 661 aaKnown RBP10.62□□□□□ -0.71
LRCH3-215ENST00000476664 TMUB1Q9BVT8 246 aa10.62□□□□□ -0.71
LRCH3-215ENST00000476664 FAM69CQ0P6D2 419 aa10.61□□□□□ -0.71
LRCH3-215ENST00000476664 CCDC27Q2M243 656 aa10.61□□□□□ -0.71
LRCH3-215ENST00000476664 CHADLQ6NUI6 762 aa10.61□□□□□ -0.71
LRCH3-215ENST00000476664 TMC2Q8TDI7 906 aa10.61□□□□□ -0.71
LRCH3-215ENST00000476664 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.61□□□□□ -0.71
LRCH3-215ENST00000476664 MYT1LQ9UL68 1186 aa10.61□□□□□ -0.71
LRCH3-215ENST00000476664 TARBP1Q13395 1621 aaKnown RBP10.61□□□□□ -0.71
LRCH3-215ENST00000476664 SPATA31D1Q6ZQQ2 1576 aa10.6□□□□□ -0.71
LRCH3-215ENST00000476664 TOPBP1Q92547 1522 aa10.6□□□□□ -0.71
LRCH3-215ENST00000476664 SSTR3P32745 418 aaPredicted RBP10.6□□□□□ -0.71
LRCH3-215ENST00000476664 PTGDRQ13258 359 aa10.6□□□□□ -0.71
LRCH3-215ENST00000476664 PRM3Q9NNZ6 103 aa10.6□□□□□ -0.71
LRCH3-215ENST00000476664 TMEM259Q4ZIN3 620 aa10.59□□□□□ -0.71
LRCH3-215ENST00000476664 PBXIP1Q96AQ6 731 aa10.59□□□□□ -0.71
LRCH3-215ENST00000476664 BEGAINQ9BUH8 593 aa10.59□□□□□ -0.71
LRCH3-215ENST00000476664 POLR3EQ9NVU0 708 aa10.59□□□□□ -0.71
LRCH3-215ENST00000476664 PTGER2P43116 358 aa10.58□□□□□ -0.72
LRCH3-215ENST00000476664 SNRKQ9NRH2 765 aa10.58□□□□□ -0.72
LRCH3-215ENST00000476664 USP35Q9P2H5 1018 aa10.58□□□□□ -0.72
LRCH3-215ENST00000476664 ABCC10Q5T3U5 1492 aa10.57□□□□□ -0.72
LRCH3-215ENST00000476664 CSB-PGBD3P0DP91 1061 aa10.57□□□□□ -0.72
LRCH3-215ENST00000476664 CHMP7Q8WUX9 453 aaPredicted RBP10.57□□□□□ -0.72
LRCH3-215ENST00000476664 TSPOAP1O95153 1857 aa10.56□□□□□ -0.72
LRCH3-215ENST00000476664 TBC1D12O60347 775 aa10.56□□□□□ -0.72
LRCH3-215ENST00000476664 RFC5P40937 340 aa10.56□□□□□ -0.72
LRCH3-215ENST00000476664 MDM2Q00987 491 aaPredicted RBP10.56□□□□□ -0.72
LRCH3-215ENST00000476664 GLMNQ92990 594 aa10.56□□□□□ -0.72
LRCH3-215ENST00000476664 SNAPC4Q5SXM2 1469 aa10.55□□□□□ -0.72
LRCH3-215ENST00000476664 RSPH4AQ5TD94 716 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms