RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 ST20-MTHFSA0A0A6YYL1 179 aa6.61□□□□□ -1.35
CCDC39-204ENST00000476379 CDCA7LQ96GN5 454 aa6.61□□□□□ -1.35
CCDC39-204ENST00000476379 BCL2L13Q9BXK5 485 aa6.61□□□□□ -1.35
CCDC39-204ENST00000476379 PRKRIP1Q9H875 184 aaPredicted RBP6.61□□□□□ -1.35
CCDC39-204ENST00000476379 MYOM3Q5VTT5 1437 aa6.61□□□□□ -1.35
CCDC39-204ENST00000476379 WDR43Q15061 677 aaKnown RBP eCLIP6.61□□□□□ -1.35
CCDC39-204ENST00000476379 KIF15Q9NS87 1388 aa6.6□□□□□ -1.35
CCDC39-204ENST00000476379 TMEM132EQ6IEE7 984 aa6.6□□□□□ -1.35
CCDC39-204ENST00000476379 CFAP65Q6ZU64 1925 aaKnown RBP6.6□□□□□ -1.35
CCDC39-204ENST00000476379 NBPF8Q3BBV2 869 aa6.6□□□□□ -1.35
CCDC39-204ENST00000476379 SLKQ9H2G2 1235 aaPredicted RBP6.6□□□□□ -1.35
CCDC39-204ENST00000476379 ABCC2Q92887 1545 aa6.6□□□□□ -1.35
CCDC39-204ENST00000476379 UGGT2Q9NYU1 1516 aa6.6□□□□□ -1.35
CCDC39-204ENST00000476379 FYCO1Q9BQS8 1478 aa6.6□□□□□ -1.35
CCDC39-204ENST00000476379 SOX12O15370 315 aa6.6□□□□□ -1.35
CCDC39-204ENST00000476379 CLUAP1Q96AJ1 413 aa6.6□□□□□ -1.35
CCDC39-204ENST00000476379 RRP7AQ9Y3A4 280 aaKnown RBP6.6□□□□□ -1.35
CCDC39-204ENST00000476379 AKNAQ7Z591 1439 aa6.59□□□□□ -1.35
CCDC39-204ENST00000476379 RAPGEF6Q8TEU7 1601 aa6.59□□□□□ -1.35
CCDC39-204ENST00000476379 GPATCH8Q9UKJ3 1502 aaKnown RBP6.59□□□□□ -1.35
CCDC39-204ENST00000476379 CCER2I3L3R5 266 aa6.59□□□□□ -1.35
CCDC39-204ENST00000476379 YEATS2Q9ULM3 1422 aa6.59□□□□□ -1.35
CCDC39-204ENST00000476379 IL27Q8NEV9 243 aa6.58□□□□□ -1.36
CCDC39-204ENST00000476379 GZF1Q9H116 711 aaPredicted RBP6.58□□□□□ -1.36
CCDC39-204ENST00000476379 FANCAO15360 1455 aa6.58□□□□□ -1.36
CCDC39-204ENST00000476379 SLC26A8Q96RN1 970 aa6.58□□□□□ -1.36
CCDC39-204ENST00000476379 PLEKHH2Q8IVE3 1493 aa6.57□□□□□ -1.36
CCDC39-204ENST00000476379 SYCP2Q9BX26 1530 aa6.57□□□□□ -1.36
CCDC39-204ENST00000476379 ARID3AQ99856 593 aa6.57□□□□□ -1.36
CCDC39-204ENST00000476379 ABCC5O15440 1437 aa6.57□□□□□ -1.36
CCDC39-204ENST00000476379 ADGRL1O94910 1474 aa6.57□□□□□ -1.36
CCDC39-204ENST00000476379 ADCY10Q96PN6 1610 aa6.57□□□□□ -1.36
CCDC39-204ENST00000476379 ANO8Q9HCE9 1232 aaPredicted RBP6.56□□□□□ -1.36
CCDC39-204ENST00000476379 EFCAB5A4FU69 1503 aa6.56□□□□□ -1.36
CCDC39-204ENST00000476379 COL17A1Q9UMD9 1497 aaPredicted RBP6.56□□□□□ -1.36
CCDC39-204ENST00000476379 KIF7Q2M1P5 1343 aa6.56□□□□□ -1.36
CCDC39-204ENST00000476379 WDR7Q9Y4E6 1490 aa6.56□□□□□ -1.36
CCDC39-204ENST00000476379 CAMSAP2Q08AD1 1489 aa6.56□□□□□ -1.36
CCDC39-204ENST00000476379 RCAN3Q9UKA8 241 aa6.56□□□□□ -1.36
CCDC39-204ENST00000476379 CLASP1Q7Z460 1538 aa6.56□□□□□ -1.36
CCDC39-204ENST00000476379 NBPF1Q3BBV0 1214 aa6.55□□□□□ -1.36
CCDC39-204ENST00000476379 TTC37Q6PGP7 1564 aa6.55□□□□□ -1.36
CCDC39-204ENST00000476379 HECW1Q76N89 1606 aa6.55□□□□□ -1.36
CCDC39-204ENST00000476379 C9orf84Q5VXU9 1444 aa6.55□□□□□ -1.36
CCDC39-204ENST00000476379 LRRIQ1Q96JM4 1722 aa6.55□□□□□ -1.36
CCDC39-204ENST00000476379 ARHGEF12Q9NZN5 1544 aa6.55□□□□□ -1.36
CCDC39-204ENST00000476379 SAMD9Q5K651 1589 aa6.55□□□□□ -1.36
CCDC39-204ENST00000476379 UTRNP46939 3433 aa6.55□□□□□ -1.36
CCDC39-204ENST00000476379 APBB1O00213 710 aa6.54□□□□□ -1.36
CCDC39-204ENST00000476379 FOXD4L1Q9NU39 408 aa6.54□□□□□ -1.36
CCDC39-204ENST00000476379 TRAK1Q9UPV9 953 aa6.54□□□□□ -1.36
CCDC39-204ENST00000476379 C14orf37Q86TY3 774 aa6.54□□□□□ -1.36
CCDC39-204ENST00000476379 KNSTRNQ9Y448 316 aa6.54□□□□□ -1.36
CCDC39-204ENST00000476379 TCERG1O14776 1098 aaKnown RBP6.54□□□□□ -1.36
CCDC39-204ENST00000476379 HSP90AA1P07900 732 aaKnown RBP6.54□□□□□ -1.36
CCDC39-204ENST00000476379 ANKRD30AQ9BXX3 1397 aa6.54□□□□□ -1.36
CCDC39-204ENST00000476379 DAPK1P53355 1430 aa6.54□□□□□ -1.36
CCDC39-204ENST00000476379 ANKRD50Q9ULJ7 1429 aa6.54□□□□□ -1.36
CCDC39-204ENST00000476379 CRBNQ96SW2 442 aa6.54□□□□□ -1.36
CCDC39-204ENST00000476379 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.53□□□□□ -1.36
CCDC39-204ENST00000476379 U2SURPO15042 1029 aaKnown RBP6.53□□□□□ -1.36
CCDC39-204ENST00000476379 NUDCQ9Y266 331 aa6.53□□□□□ -1.36
CCDC39-204ENST00000476379 LMOD2Q6P5Q4 547 aa6.52□□□□□ -1.36
CCDC39-204ENST00000476379 KDM6BO15054 1643 aa6.52□□□□□ -1.37
CCDC39-204ENST00000476379 ZCCHC11Q5TAX3 1644 aaKnown RBP6.52□□□□□ -1.37
CCDC39-204ENST00000476379 MIA2Q96PC5 1412 aa6.52□□□□□ -1.37
CCDC39-204ENST00000476379 CFAP70Q5T0N1 1121 aa6.52□□□□□ -1.37
CCDC39-204ENST00000476379 PANK3Q9H999 370 aa6.52□□□□□ -1.37
CCDC39-204ENST00000476379 NAIPQ13075 1403 aa6.52□□□□□ -1.37
CCDC39-204ENST00000476379 ABCA8O94911 1581 aa6.52□□□□□ -1.37
CCDC39-204ENST00000476379 TAOK2Q9UL54 1235 aa6.51□□□□□ -1.37
CCDC39-204ENST00000476379 XPCQ01831 940 aaPredicted RBP6.51□□□□□ -1.37
CCDC39-204ENST00000476379 TIMELESSQ9UNS1 1208 aa6.51□□□□□ -1.37
CCDC39-204ENST00000476379 PDE4AP27815 886 aa6.51□□□□□ -1.37
CCDC39-204ENST00000476379 IDI1Q13907 227 aa6.51□□□□□ -1.37
CCDC39-204ENST00000476379 IPO9Q96P70 1041 aaKnown RBP6.51□□□□□ -1.37
CCDC39-204ENST00000476379 BRPF3Q9ULD4 1205 aa6.51□□□□□ -1.37
CCDC39-204ENST00000476379 ELL2O00472 640 aaPredicted RBP6.5□□□□□ -1.37
CCDC39-204ENST00000476379 ROCK2O75116 1388 aaKnown RBP6.5□□□□□ -1.37
CCDC39-204ENST00000476379 SUPT6HQ7KZ85 1726 aaKnown RBP6.5□□□□□ -1.37
CCDC39-204ENST00000476379 C20orf194Q5TEA3 1177 aa6.5□□□□□ -1.37
CCDC39-204ENST00000476379 AEBP2Q6ZN18 517 aaPredicted RBP6.5□□□□□ -1.37
CCDC39-204ENST00000476379 PTPN23Q9H3S7 1636 aa6.5□□□□□ -1.37
CCDC39-204ENST00000476379 EHBP1L1Q8N3D4 1523 aa6.5□□□□□ -1.37
CCDC39-204ENST00000476379 PLCH2O75038 1416 aa6.5□□□□□ -1.37
CCDC39-204ENST00000476379 NUTM2GQ5VZR2 741 aa6.49□□□□□ -1.37
CCDC39-204ENST00000476379 RRBP1Q9P2E9 1410 aaKnown RBP6.49□□□□□ -1.37
CCDC39-204ENST00000476379 NCKAP5LQ9HCH0 1330 aa6.49□□□□□ -1.37
CCDC39-204ENST00000476379 USP47Q96K76 1375 aa6.49□□□□□ -1.37
CCDC39-204ENST00000476379 NCOA1Q15788 1441 aa6.49□□□□□ -1.37
CCDC39-204ENST00000476379 ZNF428Q96B54 188 aa6.49□□□□□ -1.37
CCDC39-204ENST00000476379 COG6Q9Y2V7 657 aa6.49□□□□□ -1.37
CCDC39-204ENST00000476379 FBLN1P23142 703 aa6.48□□□□□ -1.37
CCDC39-204ENST00000476379 KDM5BQ9UGL1 1544 aa6.48□□□□□ -1.37
CCDC39-204ENST00000476379 CCDC7Q96M83 1385 aa6.48□□□□□ -1.37
CCDC39-204ENST00000476379 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.48□□□□□ -1.37
CCDC39-204ENST00000476379 MINK1Q8N4C8 1332 aaPredicted RBP6.48□□□□□ -1.37
CCDC39-204ENST00000476379 APAF1O14727 1248 aa6.48□□□□□ -1.37
CCDC39-204ENST00000476379 NCLP19338 710 aaKnown RBP6.48□□□□□ -1.37
CCDC39-204ENST00000476379 WAPLQ7Z5K2 1190 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms