RNA–Protein interactions for RNA: ENST00000476350.1

MACF1-216, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 5,304 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-216ENST00000476350 POGKQ9P215 609 aa11.22□□□□□ -0.61
MACF1-216ENST00000476350 POGZQ7Z3K3 1410 aa11.21□□□□□ -0.61
MACF1-216ENST00000476350 KIF15Q9NS87 1388 aa11.21□□□□□ -0.61
MACF1-216ENST00000476350 HMGB2P26583 209 aaKnown RBP11.21□□□□□ -0.62
MACF1-216ENST00000476350 NUP153P49790 1475 aaKnown RBP11.21□□□□□ -0.62
MACF1-216ENST00000476350 PTPRGP23470 1445 aa11.21□□□□□ -0.62
MACF1-216ENST00000476350 RSPH4AQ5TD94 716 aa11.2□□□□□ -0.62
MACF1-216ENST00000476350 GGT6Q6P531 493 aa11.2□□□□□ -0.62
MACF1-216ENST00000476350 SENP3Q9H4L4 574 aaPredicted RBP11.2□□□□□ -0.62
MACF1-216ENST00000476350 RALGAPBQ86X10 1494 aa11.19□□□□□ -0.62
MACF1-216ENST00000476350 TMX4Q9H1E5 349 aaPredicted RBP11.19□□□□□ -0.62
MACF1-216ENST00000476350 PKD2Q13563 968 aa11.19□□□□□ -0.62
MACF1-216ENST00000476350 CARD11Q9BXL7 1154 aa11.18□□□□□ -0.62
MACF1-216ENST00000476350 DISP1Q96F81 1524 aa11.18□□□□□ -0.62
MACF1-216ENST00000476350 PNISRQ8TF01 805 aaKnown RBP11.18□□□□□ -0.62
MACF1-216ENST00000476350 MYBBP1AQ9BQG0 1328 aaKnown RBP11.17□□□□□ -0.62
MACF1-216ENST00000476350 ADGRL2O95490 1459 aa11.17□□□□□ -0.62
MACF1-216ENST00000476350 RRP1P56182 461 aaKnown RBP11.17□□□□□ -0.62
MACF1-216ENST00000476350 ADCY10Q96PN6 1610 aa11.17□□□□□ -0.62
MACF1-216ENST00000476350 MRC2Q9UBG0 1479 aa11.16□□□□□ -0.62
MACF1-216ENST00000476350 UHRF1BP1Q6BDS2 1440 aa11.16□□□□□ -0.62
MACF1-216ENST00000476350 PRG4Q92954 1404 aaPredicted RBP11.16□□□□□ -0.62
MACF1-216ENST00000476350 ANKRD30AQ9BXX3 1397 aa11.16□□□□□ -0.62
MACF1-216ENST00000476350 E9PCH4 1651 aa11.16□□□□□ -0.62
MACF1-216ENST00000476350 BRD4O60885 1362 aaPredicted RBP11.16□□□□□ -0.62
MACF1-216ENST00000476350 RALBP1Q15311 655 aa11.16□□□□□ -0.62
MACF1-216ENST00000476350 CDCA8Q53HL2 280 aa11.16□□□□□ -0.62
MACF1-216ENST00000476350 PLEKHG5O94827 1062 aa11.15□□□□□ -0.62
MACF1-216ENST00000476350 KTN1Q86UP2 1357 aaKnown RBP11.14□□□□□ -0.63
MACF1-216ENST00000476350 EXOC6Q8TAG9 804 aa11.14□□□□□ -0.63
MACF1-216ENST00000476350 TROQ12816 1431 aaPredicted RBP11.14□□□□□ -0.63
MACF1-216ENST00000476350 KIAA0586Q9BVV6 1533 aa11.14□□□□□ -0.63
MACF1-216ENST00000476350 ARHGEF12Q9NZN5 1544 aa11.14□□□□□ -0.63
MACF1-216ENST00000476350 LRPPRCP42704 1394 aaKnown RBP11.13□□□□□ -0.63
MACF1-216ENST00000476350 GPATCH8Q9UKJ3 1502 aaKnown RBP11.13□□□□□ -0.63
MACF1-216ENST00000476350 RCAN3Q9UKA8 241 aa11.13□□□□□ -0.63
MACF1-216ENST00000476350 KDM2AQ9Y2K7 1162 aa11.13□□□□□ -0.63
MACF1-216ENST00000476350 TCERG1O14776 1098 aaKnown RBP11.13□□□□□ -0.63
MACF1-216ENST00000476350 ANKRD50Q9ULJ7 1429 aa11.12□□□□□ -0.63
MACF1-216ENST00000476350 SALL2Q9Y467 1007 aaPredicted RBP11.12□□□□□ -0.63
MACF1-216ENST00000476350 CEP170Q5SW79 1584 aa11.12□□□□□ -0.63
MACF1-216ENST00000476350 CDC42BPAQ5VT25 1732 aa11.11□□□□□ -0.63
MACF1-216ENST00000476350 NUP155O75694 1391 aa11.11□□□□□ -0.63
MACF1-216ENST00000476350 LAS1LQ9Y4W2 734 aaKnown RBP11.1□□□□□ -0.63
MACF1-216ENST00000476350 IFT140Q96RY7 1462 aa11.1□□□□□ -0.63
MACF1-216ENST00000476350 SPAG9O60271 1321 aaKnown RBP11.1□□□□□ -0.63
MACF1-216ENST00000476350 KDM5DQ9BY66 1539 aa11.1□□□□□ -0.63
MACF1-216ENST00000476350 ST20-MTHFSA0A0A6YYL1 179 aa11.1□□□□□ -0.63
MACF1-216ENST00000476350 PDE4AP27815 886 aa11.1□□□□□ -0.63
MACF1-216ENST00000476350 SHANK2Q9UPX8 1470 aa11.09□□□□□ -0.63
MACF1-216ENST00000476350 DCAF11Q8TEB1 546 aa11.09□□□□□ -0.63
MACF1-216ENST00000476350 GRIN2AQ12879 1464 aa11.09□□□□□ -0.63
MACF1-216ENST00000476350 C9orf84Q5VXU9 1444 aa11.08□□□□□ -0.64
MACF1-216ENST00000476350 ZNF608Q9ULD9 1512 aaPredicted RBP11.08□□□□□ -0.64
MACF1-216ENST00000476350 WASHC2CQ9Y4E1 1318 aa11.08□□□□□ -0.64
MACF1-216ENST00000476350 PLB1Q6P1J6 1458 aa11.08□□□□□ -0.64
MACF1-216ENST00000476350 PDE3BQ13370 1112 aa11.07□□□□□ -0.64
MACF1-216ENST00000476350 TRPM1Q7Z4N2 1603 aa11.07□□□□□ -0.64
MACF1-216ENST00000476350 MS4A1P11836 297 aa11.06□□□□□ -0.64
MACF1-216ENST00000476350 EIF4G3O43432 1585 aaKnown RBP11.06□□□□□ -0.64
MACF1-216ENST00000476350 CSB-PGBD3P0DP91 1061 aa11.05□□□□□ -0.64
MACF1-216ENST00000476350 DDRGK1Q96HY6 314 aa11.05□□□□□ -0.64
MACF1-216ENST00000476350 DNAJC5BQ9UF47 199 aa11.05□□□□□ -0.64
MACF1-216ENST00000476350 NLRP13Q86W25 1043 aa11.05□□□□□ -0.64
MACF1-216ENST00000476350 PARD3Q8TEW0 1356 aa11.05□□□□□ -0.64
MACF1-216ENST00000476350 BACH2Q9BYV9 841 aa11.05□□□□□ -0.64
MACF1-216ENST00000476350 CC2D1BQ5T0F9 858 aaKnown RBP11.05□□□□□ -0.64
MACF1-216ENST00000476350 ATF3P18847 181 aa11.04□□□□□ -0.64
MACF1-216ENST00000476350 ARXQ96QS3 562 aa11.04□□□□□ -0.64
MACF1-216ENST00000476350 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.04□□□□□ -0.64
MACF1-216ENST00000476350 PPM1GO15355 546 aaPredicted RBP11.04□□□□□ -0.64
MACF1-216ENST00000476350 CANXP27824 592 aaKnown RBP11.03□□□□□ -0.64
MACF1-216ENST00000476350 PLIN1O60240 522 aa11.03□□□□□ -0.64
MACF1-216ENST00000476350 USP35Q9P2H5 1018 aa11.03□□□□□ -0.64
MACF1-216ENST00000476350 BLMP54132 1417 aaPredicted RBP11.03□□□□□ -0.64
MACF1-216ENST00000476350 FAM135AQ9P2D6 1515 aa11.03□□□□□ -0.64
MACF1-216ENST00000476350 CRBNQ96SW2 442 aa11.03□□□□□ -0.64
MACF1-216ENST00000476350 CDCA7LQ96GN5 454 aa11.02□□□□□ -0.64
MACF1-216ENST00000476350 DAXXQ9UER7 740 aaPredicted RBP11.02□□□□□ -0.65
MACF1-216ENST00000476350 PRAG1Q86YV5 1406 aa11.01□□□□□ -0.65
MACF1-216ENST00000476350 PLEKHH2Q8IVE3 1493 aa11.01□□□□□ -0.65
MACF1-216ENST00000476350 ARHGEF5Q12774 1597 aa11.01□□□□□ -0.65
MACF1-216ENST00000476350 ABCC10Q5T3U5 1492 aa11.01□□□□□ -0.65
MACF1-216ENST00000476350 ZMYM4Q5VZL5 1548 aa11.01□□□□□ -0.65
MACF1-216ENST00000476350 MYO5CQ9NQX4 1742 aa11.01□□□□□ -0.65
MACF1-216ENST00000476350 MAGI1Q96QZ7 1491 aaPredicted RBP11.01□□□□□ -0.65
MACF1-216ENST00000476350 KIF3BO15066 747 aa11□□□□□ -0.65
MACF1-216ENST00000476350 CFAP53Q96M91 514 aa11□□□□□ -0.65
MACF1-216ENST00000476350 CCDC144AA2RUR9 1427 aa11□□□□□ -0.65
MACF1-216ENST00000476350 COL17A1Q9UMD9 1497 aaPredicted RBP11□□□□□ -0.65
MACF1-216ENST00000476350 LAMC1P11047 1609 aa11□□□□□ -0.65
MACF1-216ENST00000476350 IL27Q8NEV9 243 aa11□□□□□ -0.65
MACF1-216ENST00000476350 HNRNPMP52272 730 aaKnown RBP eCLIP10.99□□□□□ -0.65
MACF1-216ENST00000476350 RTN4Q9NQC3 1192 aaKnown RBP10.99□□□□□ -0.65
MACF1-216ENST00000476350 DISP3Q9P2K9 1392 aa10.99□□□□□ -0.65
MACF1-216ENST00000476350 PRDM15P57071 1507 aaPredicted RBP10.99□□□□□ -0.65
MACF1-216ENST00000476350 EIF2AK4Q9P2K8 1649 aaKnown RBP10.99□□□□□ -0.65
MACF1-216ENST00000476350 ERBINQ96RT1 1412 aa10.98□□□□□ -0.65
MACF1-216ENST00000476350 CHMP4AQ9BY43 222 aa10.98□□□□□ -0.65
MACF1-216ENST00000476350 THEMISQ8N1K5 641 aaPredicted RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms