RNA–Protein interactions for RNA: ENST00000476250.5

PGAP1-209, Transcript of post-GPI attachment to proteins 1, humanhuman

TSL 3

Gene PGAP1, Length 725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP1-209ENST00000476250 DNAJC5Q9H3Z4 198 aa11.62□□□□□ -0.55
PGAP1-209ENST00000476250 NRG2O14511 850 aaPredicted RBP11.61□□□□□ -0.55
PGAP1-209ENST00000476250 LAPTM4BQ86VI4 370 aa11.6□□□□□ -0.55
PGAP1-209ENST00000476250 RYDENQ9NUL5 291 aaKnown RBP11.6□□□□□ -0.55
PGAP1-209ENST00000476250 ZFRQ96KR1 1074 aaKnown RBP11.59□□□□□ -0.55
PGAP1-209ENST00000476250 PRKD2Q9BZL6 878 aa11.57□□□□□ -0.56
PGAP1-209ENST00000476250 GTPBP6O43824 516 aaPredicted RBP11.55□□□□□ -0.56
PGAP1-209ENST00000476250 ZNF775Q96BV0 537 aaPredicted RBP11.54□□□□□ -0.56
PGAP1-209ENST00000476250 NCKAP5LQ9HCH0 1330 aa11.54□□□□□ -0.56
PGAP1-209ENST00000476250 COL9A1P20849 921 aa11.53□□□□□ -0.56
PGAP1-209ENST00000476250 KIAA1468Q9P260 1216 aa11.53□□□□□ -0.56
PGAP1-209ENST00000476250 PDE4AP27815 886 aa11.52□□□□□ -0.57
PGAP1-209ENST00000476250 SEPT9Q9UHD8 586 aaPredicted RBP11.52□□□□□ -0.57
PGAP1-209ENST00000476250 PCDHGA10Q9Y5H3 936 aa11.52□□□□□ -0.57
PGAP1-209ENST00000476250 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.51□□□□□ -0.57
PGAP1-209ENST00000476250 TSR3Q9UJK0 312 aaKnown RBP11.51□□□□□ -0.57
PGAP1-209ENST00000476250 HPS5Q9UPZ3 1129 aa11.51□□□□□ -0.57
PGAP1-209ENST00000476250 MAP3K9P80192 1104 aa11.5□□□□□ -0.57
PGAP1-209ENST00000476250 LARP6Q9BRS8 491 aaKnown RBP11.49□□□□□ -0.57
PGAP1-209ENST00000476250 ONECUT3O60422 494 aaPredicted RBP11.48□□□□□ -0.57
PGAP1-209ENST00000476250 LRCH3Q96II8 777 aa11.48□□□□□ -0.57
PGAP1-209ENST00000476250 FBXW7Q969H0 707 aa11.47□□□□□ -0.57
PGAP1-209ENST00000476250 PDZRN3Q9UPQ7 1066 aa11.46□□□□□ -0.57
PGAP1-209ENST00000476250 TYW1BQ6NUM6 668 aa11.45□□□□□ -0.58
PGAP1-209ENST00000476250 V9GY48 417 aaPredicted RBP11.45□□□□□ -0.58
PGAP1-209ENST00000476250 FAM98CQ17RN3 349 aaKnown RBP11.44□□□□□ -0.58
PGAP1-209ENST00000476250 DDX27Q96GQ7 796 aaKnown RBP11.44□□□□□ -0.58
PGAP1-209ENST00000476250 PHF14O94880 888 aa11.43□□□□□ -0.58
PGAP1-209ENST00000476250 PPP1R18Q6NYC8 613 aa11.4□□□□□ -0.58
PGAP1-209ENST00000476250 CADPS2Q86UW7 1296 aa11.4□□□□□ -0.58
PGAP1-209ENST00000476250 PPP4CP60510 307 aa11.39□□□□□ -0.59
PGAP1-209ENST00000476250 EMILIN3Q9NT22 766 aa11.39□□□□□ -0.59
PGAP1-209ENST00000476250 TRIM6-TRIM34B2RNG4 842 aa11.38□□□□□ -0.59
PGAP1-209ENST00000476250 MFSD10Q14728 455 aa11.38□□□□□ -0.59
PGAP1-209ENST00000476250 TJAP1Q5JTD0 557 aa11.37□□□□□ -0.59
PGAP1-209ENST00000476250 C6orf132Q5T0Z8 1188 aa11.36□□□□□ -0.59
PGAP1-209ENST00000476250 EPAS1Q99814 870 aa11.34□□□□□ -0.59
PGAP1-209ENST00000476250 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.34□□□□□ -0.59
PGAP1-209ENST00000476250 IL21Q9HBE4 155 aa11.33□□□□□ -0.6
PGAP1-209ENST00000476250 MTRQ99707 1265 aa11.32□□□□□ -0.6
PGAP1-209ENST00000476250 GGCXP38435 758 aa11.26□□□□□ -0.61
PGAP1-209ENST00000476250 PKDCCQ504Y2 493 aa11.26□□□□□ -0.61
PGAP1-209ENST00000476250 PACS2Q86VP3 889 aa11.26□□□□□ -0.61
PGAP1-209ENST00000476250 ZNF516Q92618 1163 aa11.25□□□□□ -0.61
PGAP1-209ENST00000476250 RBM33Q96EV2 1170 aaKnown RBP11.25□□□□□ -0.61
PGAP1-209ENST00000476250 SAMD7Q7Z3H4 446 aa11.23□□□□□ -0.61
PGAP1-209ENST00000476250 TSKSQ9UJT2 592 aa11.23□□□□□ -0.61
PGAP1-209ENST00000476250 DPYSL4O14531 572 aa11.22□□□□□ -0.61
PGAP1-209ENST00000476250 BBXQ8WY36 941 aaPredicted RBP11.21□□□□□ -0.61
PGAP1-209ENST00000476250 POTECB2RU33 542 aa11.19□□□□□ -0.62
PGAP1-209ENST00000476250 RNF40O75150 1001 aa11.19□□□□□ -0.62
PGAP1-209ENST00000476250 MYT1Q01538 1121 aa11.18□□□□□ -0.62
PGAP1-209ENST00000476250 CAMK2BQ13554 666 aa11.18□□□□□ -0.62
PGAP1-209ENST00000476250 NKX2-3Q8TAU0 364 aa11.18□□□□□ -0.62
PGAP1-209ENST00000476250 TREML4Q6UXN2 200 aa11.17□□□□□ -0.62
PGAP1-209ENST00000476250 SMAPO00193 183 aa11.16□□□□□ -0.62
PGAP1-209ENST00000476250 DGAT1O75907 488 aa11.16□□□□□ -0.62
PGAP1-209ENST00000476250 DDX12PQ92771 950 aa11.15□□□□□ -0.62
PGAP1-209ENST00000476250 EN1Q05925 392 aaPredicted RBP11.14□□□□□ -0.63
PGAP1-209ENST00000476250 SPRYD3Q8NCJ5 442 aa11.13□□□□□ -0.63
PGAP1-209ENST00000476250 TSR1Q2NL82 804 aaKnown RBP11.12□□□□□ -0.63
PGAP1-209ENST00000476250 TRIM67Q6ZTA4 783 aa11.12□□□□□ -0.63
PGAP1-209ENST00000476250 TMUB1Q9BVT8 246 aa11.12□□□□□ -0.63
PGAP1-209ENST00000476250 MAP3K7O43318 606 aa11.11□□□□□ -0.63
PGAP1-209ENST00000476250 HDGFP51858 240 aaKnown RBP11.11□□□□□ -0.63
PGAP1-209ENST00000476250 COPS2P61201 443 aa11.11□□□□□ -0.63
PGAP1-209ENST00000476250 SLC19A1P41440 591 aa11.1□□□□□ -0.63
PGAP1-209ENST00000476250 APLP1P51693 650 aa11.1□□□□□ -0.63
PGAP1-209ENST00000476250 CDCA7LQ96GN5 454 aa11.1□□□□□ -0.63
PGAP1-209ENST00000476250 FAM187AA6NFU0 413 aa11.09□□□□□ -0.63
PGAP1-209ENST00000476250 NBR1Q14596 966 aa11.09□□□□□ -0.63
PGAP1-209ENST00000476250 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.09□□□□□ -0.63
PGAP1-209ENST00000476250 PRSS12P56730 875 aa11.08□□□□□ -0.64
PGAP1-209ENST00000476250 CFAP44Q96MT7 982 aa11.08□□□□□ -0.64
PGAP1-209ENST00000476250 TATDN2Q93075 761 aa11.07□□□□□ -0.64
PGAP1-209ENST00000476250 RTN4Q9NQC3 1192 aaKnown RBP11.07□□□□□ -0.64
PGAP1-209ENST00000476250 FAM198AQ9UFP1 575 aa11.07□□□□□ -0.64
PGAP1-209ENST00000476250 NBPF26B4DH59 902 aa11.06□□□□□ -0.64
PGAP1-209ENST00000476250 PAXIP1Q6ZW49 1069 aaPredicted RBP11.06□□□□□ -0.64
PGAP1-209ENST00000476250 PNMA3Q9UL41 463 aa11.06□□□□□ -0.64
PGAP1-209ENST00000476250 LCE2AQ5TA79 106 aaPredicted RBP11.05□□□□□ -0.64
PGAP1-209ENST00000476250 STK17AQ9UEE5 414 aa11.05□□□□□ -0.64
PGAP1-209ENST00000476250 C3orf80F5H4A9 247 aa11.04□□□□□ -0.64
PGAP1-209ENST00000476250 CERKQ8TCT0 537 aa11.04□□□□□ -0.64
PGAP1-209ENST00000476250 NECTIN2Q92692 538 aa11.04□□□□□ -0.64
PGAP1-209ENST00000476250 PRR20EP86478 221 aa11.03□□□□□ -0.64
PGAP1-209ENST00000476250 PRR20CP86479 221 aa11.03□□□□□ -0.64
PGAP1-209ENST00000476250 PRR20DP86480 221 aa11.03□□□□□ -0.64
PGAP1-209ENST00000476250 PRR20BP86481 221 aa11.03□□□□□ -0.64
PGAP1-209ENST00000476250 PRR20AP86496 221 aa11.03□□□□□ -0.64
PGAP1-209ENST00000476250 AMER1Q5JTC6 1135 aaPredicted RBP11.03□□□□□ -0.64
PGAP1-209ENST00000476250 ST8SIA5O15466 376 aa11.02□□□□□ -0.65
PGAP1-209ENST00000476250 PDIA6Q15084 440 aa11.02□□□□□ -0.65
PGAP1-209ENST00000476250 SPRYD7Q5W111 196 aa11.02□□□□□ -0.65
PGAP1-209ENST00000476250 ZNF598Q86UK7 904 aaKnown RBP11.02□□□□□ -0.65
PGAP1-209ENST00000476250 WFS1O76024 890 aa11.01□□□□□ -0.65
PGAP1-209ENST00000476250 RNF223E7ERA6 249 aa11□□□□□ -0.65
PGAP1-209ENST00000476250 TNFRSF10AO00220 468 aa11□□□□□ -0.65
PGAP1-209ENST00000476250 ZPR1O75312 459 aa11□□□□□ -0.65
PGAP1-209ENST00000476250 E2F4Q16254 413 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms