RNA–Protein interactions for RNA: ENST00000476217.5

SSR3-206, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3 BASIC

Gene SSR3, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-206ENST00000476217 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.34□□□□□ -0.59
SSR3-206ENST00000476217 RBM33Q96EV2 1170 aaKnown RBP11.34□□□□□ -0.59
SSR3-206ENST00000476217 PPP1R3GB7ZBB8 358 aa11.33□□□□□ -0.6
SSR3-206ENST00000476217 POTEB3A0JP26 581 aa11.32□□□□□ -0.6
SSR3-206ENST00000476217 POTEBQ6S5H4 581 aa11.32□□□□□ -0.6
SSR3-206ENST00000476217 LMOD2Q6P5Q4 547 aa11.31□□□□□ -0.6
SSR3-206ENST00000476217 GPIHBP1Q8IV16 184 aa11.3□□□□□ -0.6
SSR3-206ENST00000476217 KCNK17Q96T54 332 aa11.3□□□□□ -0.6
SSR3-206ENST00000476217 RBM27Q9P2N5 1060 aaKnown RBP11.3□□□□□ -0.6
SSR3-206ENST00000476217 NUTM2FA1L443 756 aa11.29□□□□□ -0.6
SSR3-206ENST00000476217 RBM26Q5T8P6 1007 aaKnown RBP11.29□□□□□ -0.6
SSR3-206ENST00000476217 CDAN1Q8IWY9 1227 aa11.29□□□□□ -0.6
SSR3-206ENST00000476217 SLC4A5Q9BY07 1137 aa11.29□□□□□ -0.6
SSR3-206ENST00000476217 FCHSD2O94868 740 aa11.28□□□□□ -0.6
SSR3-206ENST00000476217 TK2O00142 265 aa11.27□□□□□ -0.61
SSR3-206ENST00000476217 ONECUT3O60422 494 aaPredicted RBP11.27□□□□□ -0.61
SSR3-206ENST00000476217 TSR1Q2NL82 804 aaKnown RBP11.27□□□□□ -0.61
SSR3-206ENST00000476217 PRIM1P49642 420 aaKnown RBP11.26□□□□□ -0.61
SSR3-206ENST00000476217 PTGDRQ13258 359 aa11.26□□□□□ -0.61
SSR3-206ENST00000476217 PSEN2P49810 448 aa11.25□□□□□ -0.61
SSR3-206ENST00000476217 HIC1Q14526 733 aa11.25□□□□□ -0.61
SSR3-206ENST00000476217 POTEEQ6S8J3 1075 aa11.25□□□□□ -0.61
SSR3-206ENST00000476217 LSM11P83369 360 aaKnown RBP eCLIP11.24□□□□□ -0.61
SSR3-206ENST00000476217 ZBED2Q9BTP6 218 aa11.23□□□□□ -0.61
SSR3-206ENST00000476217 CDHR5Q9HBB8 845 aa11.23□□□□□ -0.61
SSR3-206ENST00000476217 AXIN2Q9Y2T1 843 aa11.23□□□□□ -0.61
SSR3-206ENST00000476217 NPDC1Q9NQX5 325 aaPredicted RBP11.22□□□□□ -0.61
SSR3-206ENST00000476217 COL9A1P20849 921 aa11.21□□□□□ -0.61
SSR3-206ENST00000476217 PRSS12P56730 875 aa11.21□□□□□ -0.61
SSR3-206ENST00000476217 TRIM6-TRIM34B2RNG4 842 aa11.19□□□□□ -0.62
SSR3-206ENST00000476217 GNPATO15228 680 aa11.19□□□□□ -0.62
SSR3-206ENST00000476217 DMRTA1Q5VZB9 504 aa11.19□□□□□ -0.62
SSR3-206ENST00000476217 CDCA7LQ96GN5 454 aa11.19□□□□□ -0.62
SSR3-206ENST00000476217 KRTAP3-3Q9BYR6 98 aa11.19□□□□□ -0.62
SSR3-206ENST00000476217 KRTAP3-2Q9BYR7 98 aa11.19□□□□□ -0.62
SSR3-206ENST00000476217 ADGRD1Q6QNK2 874 aa11.18□□□□□ -0.62
SSR3-206ENST00000476217 PACS2Q86VP3 889 aa11.18□□□□□ -0.62
SSR3-206ENST00000476217 RABGEF1Q9UJ41 708 aa11.18□□□□□ -0.62
SSR3-206ENST00000476217 NBPF3Q9H094 633 aa11.17□□□□□ -0.62
SSR3-206ENST00000476217 VPS9D1Q9Y2B5 631 aa11.17□□□□□ -0.62
SSR3-206ENST00000476217 GPR37O15354 613 aa11.16□□□□□ -0.62
SSR3-206ENST00000476217 ANKRD13DQ6ZTN6 518 aa11.16□□□□□ -0.62
SSR3-206ENST00000476217 ZC3H15Q8WU90 426 aaKnown RBP11.15□□□□□ -0.62
SSR3-206ENST00000476217 STAC3Q96MF2 364 aa11.15□□□□□ -0.62
SSR3-206ENST00000476217 NBPF26B4DH59 902 aa11.14□□□□□ -0.63
SSR3-206ENST00000476217 TTC13Q8NBP0 860 aa11.14□□□□□ -0.63
SSR3-206ENST00000476217 PADI6Q6TGC4 694 aa11.13□□□□□ -0.63
SSR3-206ENST00000476217 ZMYND10O75800 440 aa11.12□□□□□ -0.63
SSR3-206ENST00000476217 PROX2Q3B8N5 592 aa11.12□□□□□ -0.63
SSR3-206ENST00000476217 LAPTM4BQ86VI4 370 aa11.12□□□□□ -0.63
SSR3-206ENST00000476217 TSKSQ9UJT2 592 aa11.12□□□□□ -0.63
SSR3-206ENST00000476217 MINK1Q8N4C8 1332 aaPredicted RBP11.11□□□□□ -0.63
SSR3-206ENST00000476217 MAP2K5Q13163 448 aa11.11□□□□□ -0.63
SSR3-206ENST00000476217 BHMG1C9JSJ3 638 aaPredicted RBP11.1□□□□□ -0.63
SSR3-206ENST00000476217 HRO43593 1189 aa11.1□□□□□ -0.63
SSR3-206ENST00000476217 OATP04181 439 aa11.1□□□□□ -0.63
SSR3-206ENST00000476217 BARGINQ6ZT62 677 aa11.1□□□□□ -0.63
SSR3-206ENST00000476217 KIAA1468Q9P260 1216 aa11.1□□□□□ -0.63
SSR3-206ENST00000476217 MRPL50Q8N5N7 158 aaKnown RBP11.09□□□□□ -0.63
SSR3-206ENST00000476217 RBM46Q8TBY0 533 aaKnown RBP11.09□□□□□ -0.63
SSR3-206ENST00000476217 KRI1Q8N9T8 703 aaKnown RBP11.07□□□□□ -0.64
SSR3-206ENST00000476217 TATDN2Q93075 761 aa11.07□□□□□ -0.64
SSR3-206ENST00000476217 PNMA3Q9UL41 463 aa11.07□□□□□ -0.64
SSR3-206ENST00000476217 FAM98CQ17RN3 349 aaKnown RBP11.05□□□□□ -0.64
SSR3-206ENST00000476217 ADGRG1Q9Y653 693 aa11.05□□□□□ -0.64
SSR3-206ENST00000476217 GOLGA8CPA6NN73 597 aa11.04□□□□□ -0.64
SSR3-206ENST00000476217 IRF6O14896 467 aa11.04□□□□□ -0.64
SSR3-206ENST00000476217 HDGFP51858 240 aaKnown RBP11.04□□□□□ -0.64
SSR3-206ENST00000476217 NUDT18Q6ZVK8 323 aa11.04□□□□□ -0.64
SSR3-206ENST00000476217 FAM198AQ9UFP1 575 aa11.04□□□□□ -0.64
SSR3-206ENST00000476217 FECHP22830 423 aa11.03□□□□□ -0.64
SSR3-206ENST00000476217 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.01□□□□□ -0.65
SSR3-206ENST00000476217 SLC4A3P48751 1232 aa11.01□□□□□ -0.65
SSR3-206ENST00000476217 PXYLP1Q8TE99 480 aa11.01□□□□□ -0.65
SSR3-206ENST00000476217 EYA1Q99502 592 aa11.01□□□□□ -0.65
SSR3-206ENST00000476217 DNAJB2P25686 324 aa11□□□□□ -0.65
SSR3-206ENST00000476217 METTL3Q86U44 580 aaKnown RBP11□□□□□ -0.65
SSR3-206ENST00000476217 SPNS2Q8IVW8 549 aa10.99□□□□□ -0.65
SSR3-206ENST00000476217 AK7Q96M32 723 aa10.99□□□□□ -0.65
SSR3-206ENST00000476217 MYT1LQ9UL68 1186 aa10.99□□□□□ -0.65
SSR3-206ENST00000476217 TPRNQ4KMQ1 711 aa10.98□□□□□ -0.65
SSR3-206ENST00000476217 NECTIN2Q92692 538 aa10.98□□□□□ -0.65
SSR3-206ENST00000476217 CCDC102AQ96A19 550 aa10.98□□□□□ -0.65
SSR3-206ENST00000476217 ZFRQ96KR1 1074 aaKnown RBP10.98□□□□□ -0.65
SSR3-206ENST00000476217 SEPT9Q9UHD8 586 aaPredicted RBP10.98□□□□□ -0.65
SSR3-206ENST00000476217 ANKK1Q8NFD2 765 aa10.97□□□□□ -0.65
SSR3-206ENST00000476217 SMAPO00193 183 aa10.95□□□□□ -0.66
SSR3-206ENST00000476217 RCCD1A6NED2 376 aa10.94□□□□□ -0.66
SSR3-206ENST00000476217 WNT2BQ93097 391 aa10.94□□□□□ -0.66
SSR3-206ENST00000476217 LRCH3Q96II8 777 aa10.93□□□□□ -0.66
SSR3-206ENST00000476217 TMEM134Q9H6X4 195 aa10.93□□□□□ -0.66
SSR3-206ENST00000476217 C3orf80F5H4A9 247 aa10.92□□□□□ -0.66
SSR3-206ENST00000476217 FAM161AQ3B820 660 aa10.92□□□□□ -0.66
SSR3-206ENST00000476217 SLF2Q8IX21 1173 aa10.92□□□□□ -0.66
SSR3-206ENST00000476217 SLC24A3Q9HC58 644 aa10.92□□□□□ -0.66
SSR3-206ENST00000476217 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.92□□□□□ -0.66
SSR3-206ENST00000476217 SOWAHBA6NEL2 793 aa10.91□□□□□ -0.66
SSR3-206ENST00000476217 AMHR2Q16671 573 aa10.91□□□□□ -0.66
SSR3-206ENST00000476217 RSPH4AQ5TD94 716 aa10.91□□□□□ -0.66
SSR3-206ENST00000476217 RNF166Q96A37 237 aaPredicted RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms