RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 ST20-MTHFSA0A0A6YYL1 179 aa22.97■■□□□ 1.27
TVP23B-202ENST00000476139 TSHZ2Q9NRE2 1034 aa22.96■■□□□ 1.27
TVP23B-202ENST00000476139 RALGAPBQ86X10 1494 aa22.96■■□□□ 1.27
TVP23B-202ENST00000476139 KDM5CP41229 1560 aa22.95■■□□□ 1.27
TVP23B-202ENST00000476139 FAM9BQ8IZU0 186 aa22.95■■□□□ 1.26
TVP23B-202ENST00000476139 MRS2Q9HD23 443 aa22.94■■□□□ 1.26
TVP23B-202ENST00000476139 PLXNC1O60486 1568 aa22.94■■□□□ 1.26
TVP23B-202ENST00000476139 DUOX2Q9NRD8 1548 aa22.93■■□□□ 1.26
TVP23B-202ENST00000476139 UNC13BO14795 1591 aa22.93■■□□□ 1.26
TVP23B-202ENST00000476139 SPAG9O60271 1321 aaKnown RBP22.93■■□□□ 1.26
TVP23B-202ENST00000476139 ABCC1P33527 1531 aa22.92■■□□□ 1.26
TVP23B-202ENST00000476139 NBPF1Q3BBV0 1214 aa22.91■■□□□ 1.26
TVP23B-202ENST00000476139 ROCK2O75116 1388 aaKnown RBP22.91■■□□□ 1.26
TVP23B-202ENST00000476139 NEFLP07196 543 aa22.9■■□□□ 1.26
TVP23B-202ENST00000476139 DHX29Q7Z478 1369 aaKnown RBP22.89■■□□□ 1.26
TVP23B-202ENST00000476139 POLR1AO95602 1720 aaPredicted RBP22.89■■□□□ 1.26
TVP23B-202ENST00000476139 ERBINQ96RT1 1412 aa22.89■■□□□ 1.26
TVP23B-202ENST00000476139 WDR7Q9Y4E6 1490 aa22.89■■□□□ 1.25
TVP23B-202ENST00000476139 IQGAP3Q86VI3 1631 aa22.86■■□□□ 1.25
TVP23B-202ENST00000476139 PRAG1Q86YV5 1406 aa22.85■■□□□ 1.25
TVP23B-202ENST00000476139 MYT1LQ9UL68 1186 aa22.85■■□□□ 1.25
TVP23B-202ENST00000476139 ARID4BQ4LE39 1312 aaPredicted RBP22.84■■□□□ 1.25
TVP23B-202ENST00000476139 A2MP01023 1474 aa22.84■■□□□ 1.25
TVP23B-202ENST00000476139 FANCAO15360 1455 aa22.83■■□□□ 1.25
TVP23B-202ENST00000476139 IRX6P78412 446 aaPredicted RBP22.83■■□□□ 1.25
TVP23B-202ENST00000476139 OSCARQ8IYS5 282 aa22.83■■□□□ 1.24
TVP23B-202ENST00000476139 MAGI2Q86UL8 1455 aa22.82■■□□□ 1.24
TVP23B-202ENST00000476139 ASXL2Q76L83 1435 aa22.81■■□□□ 1.24
TVP23B-202ENST00000476139 RTEL1-TNFRSF6BF6WH68 1400 aa22.79■■□□□ 1.24
TVP23B-202ENST00000476139 SCAPERQ9BY12 1400 aa22.78■■□□□ 1.24
TVP23B-202ENST00000476139 ZFYVE16Q7Z3T8 1539 aa22.78■■□□□ 1.24
TVP23B-202ENST00000476139 ARAP3Q8WWN8 1544 aa22.77■■□□□ 1.24
TVP23B-202ENST00000476139 KIF3BO15066 747 aa22.77■■□□□ 1.23
TVP23B-202ENST00000476139 ATP10AO60312 1499 aa22.76■■□□□ 1.23
TVP23B-202ENST00000476139 TRPM1Q7Z4N2 1603 aa22.75■■□□□ 1.23
TVP23B-202ENST00000476139 ADGRL1O94910 1474 aa22.74■■□□□ 1.23
TVP23B-202ENST00000476139 ABCA9Q8IUA7 1624 aa22.73■■□□□ 1.23
TVP23B-202ENST00000476139 NPM1P06748 294 aaKnown RBP eCLIP22.73■■□□□ 1.23
TVP23B-202ENST00000476139 SENP3-EIF4A1A0A087X0R7 540 aa22.72■■□□□ 1.23
TVP23B-202ENST00000476139 GPRASP1Q5JY77 1395 aa22.71■■□□□ 1.23
TVP23B-202ENST00000476139 ATP7AQ04656 1500 aa22.7■■□□□ 1.22
TVP23B-202ENST00000476139 TESK2Q96S53 571 aa22.69■■□□□ 1.22
TVP23B-202ENST00000476139 E9PCH4 1651 aa22.69■■□□□ 1.22
TVP23B-202ENST00000476139 ZBED9Q6R2W3 1325 aa22.68■■□□□ 1.22
TVP23B-202ENST00000476139 TMC1Q8TDI8 760 aa22.66■■□□□ 1.22
TVP23B-202ENST00000476139 DISP3Q9P2K9 1392 aa22.65■■□□□ 1.22
TVP23B-202ENST00000476139 PNISRQ8TF01 805 aaKnown RBP22.64■■□□□ 1.22
TVP23B-202ENST00000476139 INO80Q9ULG1 1556 aaPredicted RBP22.64■■□□□ 1.22
TVP23B-202ENST00000476139 KANK1Q14678 1352 aa22.63■■□□□ 1.21
TVP23B-202ENST00000476139 PTPRTO14522 1441 aa22.62■■□□□ 1.21
TVP23B-202ENST00000476139 PRDM15P57071 1507 aaPredicted RBP22.61■■□□□ 1.21
TVP23B-202ENST00000476139 PER1O15534 1290 aaPredicted RBP22.61■■□□□ 1.21
TVP23B-202ENST00000476139 DEPDC5O75140 1603 aa22.6■■□□□ 1.21
TVP23B-202ENST00000476139 TRPM2O94759 1503 aa22.6■■□□□ 1.21
TVP23B-202ENST00000476139 CD109Q6YHK3 1445 aa22.59■■□□□ 1.21
TVP23B-202ENST00000476139 RALBP1Q15311 655 aa22.58■■□□□ 1.2
TVP23B-202ENST00000476139 MYBBP1AQ9BQG0 1328 aaKnown RBP22.57■■□□□ 1.2
TVP23B-202ENST00000476139 TMF1P82094 1093 aa22.57■■□□□ 1.2
TVP23B-202ENST00000476139 PANK3Q9H999 370 aa22.57■■□□□ 1.2
TVP23B-202ENST00000476139 CLTCL1P53675 1640 aa22.57■■□□□ 1.2
TVP23B-202ENST00000476139 EIF2AK4Q9P2K8 1649 aaKnown RBP22.56■■□□□ 1.2
TVP23B-202ENST00000476139 COL17A1Q9UMD9 1497 aaPredicted RBP22.56■■□□□ 1.2
TVP23B-202ENST00000476139 VWDEQ8N2E2 1590 aa22.55■■□□□ 1.2
TVP23B-202ENST00000476139 CC2D1BQ5T0F9 858 aaKnown RBP22.55■■□□□ 1.2
TVP23B-202ENST00000476139 RBM19Q9Y4C8 960 aaKnown RBP22.55■■□□□ 1.2
TVP23B-202ENST00000476139 SPHKAPQ2M3C7 1700 aa22.55■■□□□ 1.2
TVP23B-202ENST00000476139 TET3O43151 1660 aa22.54■■□□□ 1.2
TVP23B-202ENST00000476139 KIDINS220Q9ULH0 1771 aa22.54■■□□□ 1.2
TVP23B-202ENST00000476139 ZNF518AQ6AHZ1 1483 aa22.54■■□□□ 1.2
TVP23B-202ENST00000476139 UGGT1Q9NYU2 1555 aa22.54■■□□□ 1.2
TVP23B-202ENST00000476139 LAMC1P11047 1609 aa22.53■■□□□ 1.2
TVP23B-202ENST00000476139 MROH1Q8NDA8 1641 aa22.53■■□□□ 1.2
TVP23B-202ENST00000476139 GGT6Q6P531 493 aa22.53■■□□□ 1.2
TVP23B-202ENST00000476139 RAPGEF3O95398 923 aa22.52■■□□□ 1.2
TVP23B-202ENST00000476139 MADDQ8WXG6 1647 aa22.51■■□□□ 1.19
TVP23B-202ENST00000476139 KTN1Q86UP2 1357 aaKnown RBP22.51■■□□□ 1.19
TVP23B-202ENST00000476139 BRD4O60885 1362 aaPredicted RBP22.5■■□□□ 1.19
TVP23B-202ENST00000476139 MYT1Q01538 1121 aa22.5■■□□□ 1.19
TVP23B-202ENST00000476139 PARD3Q8TEW0 1356 aa22.49■■□□□ 1.19
TVP23B-202ENST00000476139 CEP152O94986 1710 aa22.49■■□□□ 1.19
TVP23B-202ENST00000476139 CFAP70Q5T0N1 1121 aa22.48■■□□□ 1.19
TVP23B-202ENST00000476139 ADGRF5Q8IZF2 1346 aa22.48■■□□□ 1.19
TVP23B-202ENST00000476139 NLRP13Q86W25 1043 aa22.47■■□□□ 1.19
TVP23B-202ENST00000476139 STAC3Q96MF2 364 aa22.47■■□□□ 1.19
TVP23B-202ENST00000476139 RNF17Q9BXT8 1623 aaKnown RBP22.47■■□□□ 1.19
TVP23B-202ENST00000476139 POGZQ7Z3K3 1410 aa22.47■■□□□ 1.19
TVP23B-202ENST00000476139 LRPPRCP42704 1394 aaKnown RBP22.47■■□□□ 1.19
TVP23B-202ENST00000476139 CHGAP10645 457 aaKnown RBP22.45■■□□□ 1.18
TVP23B-202ENST00000476139 SALL2Q9Y467 1007 aaPredicted RBP22.44■■□□□ 1.18
TVP23B-202ENST00000476139 CYB5RLQ6IPT4 315 aa22.43■■□□□ 1.18
TVP23B-202ENST00000476139 SCAF11Q99590 1463 aaKnown RBP22.42■■□□□ 1.18
TVP23B-202ENST00000476139 EFCAB6Q5THR3 1501 aa22.42■■□□□ 1.18
TVP23B-202ENST00000476139 NUDCQ9Y266 331 aa22.42■■□□□ 1.18
TVP23B-202ENST00000476139 SMG6Q86US8 1419 aaKnown RBP22.42■■□□□ 1.18
TVP23B-202ENST00000476139 PPRC1Q5VV67 1664 aaKnown RBP22.41■■□□□ 1.18
TVP23B-202ENST00000476139 WASHC2CQ9Y4E1 1318 aa22.41■■□□□ 1.18
TVP23B-202ENST00000476139 B4GALNT3Q6L9W6 998 aa22.41■■□□□ 1.18
TVP23B-202ENST00000476139 MLH3Q9UHC1 1453 aa22.41■■□□□ 1.18
TVP23B-202ENST00000476139 FRMPD1Q5SYB0 1578 aa22.39■■□□□ 1.18
TVP23B-202ENST00000476139 NPATQ14207 1427 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms