RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 DMRT2Q9Y5R5 561 aa18■□□□□ 0.47
MRPL55-227ENST00000475832 INO80Q9ULG1 1556 aaPredicted RBP17.99■□□□□ 0.47
MRPL55-227ENST00000475832 ADGBQ8N7X0 1667 aa17.99■□□□□ 0.47
MRPL55-227ENST00000475832 SPAG9O60271 1321 aaKnown RBP17.98■□□□□ 0.47
MRPL55-227ENST00000475832 NCOA1Q15788 1441 aa17.98■□□□□ 0.47
MRPL55-227ENST00000475832 GCC2Q8IWJ2 1684 aa17.98■□□□□ 0.47
MRPL55-227ENST00000475832 ATP7AQ04656 1500 aa17.97■□□□□ 0.47
MRPL55-227ENST00000475832 DHX57Q6P158 1386 aaKnown RBP17.96■□□□□ 0.47
MRPL55-227ENST00000475832 AGLP35573 1532 aa17.96■□□□□ 0.47
MRPL55-227ENST00000475832 RTEL1-TNFRSF6BF6WH68 1400 aa17.96■□□□□ 0.47
MRPL55-227ENST00000475832 MYT1LQ9UL68 1186 aa17.95■□□□□ 0.46
MRPL55-227ENST00000475832 MAST1Q9Y2H9 1570 aa17.95■□□□□ 0.46
MRPL55-227ENST00000475832 TRIM52Q96A61 297 aa17.94■□□□□ 0.46
MRPL55-227ENST00000475832 KIF15Q9NS87 1388 aa17.93■□□□□ 0.46
MRPL55-227ENST00000475832 MLECQ14165 292 aa17.91■□□□□ 0.46
MRPL55-227ENST00000475832 PLXNC1O60486 1568 aa17.91■□□□□ 0.46
MRPL55-227ENST00000475832 ANKRD50Q9ULJ7 1429 aa17.9■□□□□ 0.46
MRPL55-227ENST00000475832 A2MP01023 1474 aa17.88■□□□□ 0.45
MRPL55-227ENST00000475832 FER1L4A9Z1Z3 1794 aa17.85■□□□□ 0.45
MRPL55-227ENST00000475832 DUOX2Q9NRD8 1548 aa17.85■□□□□ 0.45
MRPL55-227ENST00000475832 DHX29Q7Z478 1369 aaKnown RBP17.84■□□□□ 0.45
MRPL55-227ENST00000475832 ERBINQ96RT1 1412 aa17.82■□□□□ 0.44
MRPL55-227ENST00000475832 MPHOSPH9Q99550 1183 aa17.81■□□□□ 0.44
MRPL55-227ENST00000475832 SLC4A1APQ9BWU0 796 aaKnown RBP17.8■□□□□ 0.44
MRPL55-227ENST00000475832 CEBPAP49715 358 aaPredicted RBP17.78■□□□□ 0.44
MRPL55-227ENST00000475832 PPP6R1Q9UPN7 881 aa17.78■□□□□ 0.44
MRPL55-227ENST00000475832 CNTLNQ9NXG0 1405 aa17.78■□□□□ 0.44
MRPL55-227ENST00000475832 NUP155O75694 1391 aa17.78■□□□□ 0.44
MRPL55-227ENST00000475832 PREX1Q8TCU6 1659 aa17.77■□□□□ 0.44
MRPL55-227ENST00000475832 STRCQ7RTU9 1775 aa17.76■□□□□ 0.43
MRPL55-227ENST00000475832 PTPRTO14522 1441 aa17.76■□□□□ 0.43
MRPL55-227ENST00000475832 UHRF1BP1Q6BDS2 1440 aa17.75■□□□□ 0.43
MRPL55-227ENST00000475832 IQSEC2Q5JU85 1478 aa17.75■□□□□ 0.43
MRPL55-227ENST00000475832 UBAP1LF5GYI3 381 aa17.73■□□□□ 0.43
MRPL55-227ENST00000475832 TIMELESSQ9UNS1 1208 aa17.73■□□□□ 0.43
MRPL55-227ENST00000475832 KDM5DQ9BY66 1539 aa17.72■□□□□ 0.43
MRPL55-227ENST00000475832 MROH2AA6NES4 1674 aa17.72■□□□□ 0.43
MRPL55-227ENST00000475832 KANK1Q14678 1352 aa17.72■□□□□ 0.43
MRPL55-227ENST00000475832 KIF3BO15066 747 aa17.72■□□□□ 0.43
MRPL55-227ENST00000475832 GGT6Q6P531 493 aa17.72■□□□□ 0.43
MRPL55-227ENST00000475832 ESF1Q9H501 851 aaKnown RBP17.72■□□□□ 0.43
MRPL55-227ENST00000475832 C3P01024 1663 aa17.71■□□□□ 0.43
MRPL55-227ENST00000475832 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.71■□□□□ 0.43
MRPL55-227ENST00000475832 EIF2AK4Q9P2K8 1649 aaKnown RBP17.71■□□□□ 0.43
MRPL55-227ENST00000475832 FAM135AQ9P2D6 1515 aa17.71■□□□□ 0.43
MRPL55-227ENST00000475832 ZMYM3Q14202 1370 aa17.7■□□□□ 0.42
MRPL55-227ENST00000475832 NEUROD1Q13562 356 aa17.7■□□□□ 0.42
MRPL55-227ENST00000475832 PZPP20742 1482 aa17.69■□□□□ 0.42
MRPL55-227ENST00000475832 LTBP4Q8N2S1 1624 aa17.69■□□□□ 0.42
MRPL55-227ENST00000475832 RNF17Q9BXT8 1623 aaKnown RBP17.69■□□□□ 0.42
MRPL55-227ENST00000475832 UNC13BO14795 1591 aa17.69■□□□□ 0.42
MRPL55-227ENST00000475832 PKD2Q13563 968 aa17.68■□□□□ 0.42
MRPL55-227ENST00000475832 CLTCQ00610 1675 aaKnown RBP17.67■□□□□ 0.42
MRPL55-227ENST00000475832 NPATQ14207 1427 aa17.66■□□□□ 0.42
MRPL55-227ENST00000475832 TONSLQ96HA7 1378 aa17.66■□□□□ 0.42
MRPL55-227ENST00000475832 SIN3AQ96ST3 1273 aa17.65■□□□□ 0.42
MRPL55-227ENST00000475832 SETD1BQ9UPS6 1966 aaKnown RBP17.65■□□□□ 0.42
MRPL55-227ENST00000475832 MROH1Q8NDA8 1641 aa17.65■□□□□ 0.42
MRPL55-227ENST00000475832 PHF23Q9BUL5 403 aaPredicted RBP17.62■□□□□ 0.41
MRPL55-227ENST00000475832 WASHC2CQ9Y4E1 1318 aa17.62■□□□□ 0.41
MRPL55-227ENST00000475832 ANKRD30BQ9BXX2 1392 aa17.62■□□□□ 0.41
MRPL55-227ENST00000475832 IQGAP3Q86VI3 1631 aa17.61■□□□□ 0.41
MRPL55-227ENST00000475832 FOXD1Q16676 465 aa17.61■□□□□ 0.41
MRPL55-227ENST00000475832 PRDM15P57071 1507 aaPredicted RBP17.61■□□□□ 0.41
MRPL55-227ENST00000475832 SCAF1Q9H7N4 1312 aaKnown RBP17.6■□□□□ 0.41
MRPL55-227ENST00000475832 ABCC3O15438 1527 aa17.6■□□□□ 0.41
MRPL55-227ENST00000475832 DEPDC5O75140 1603 aa17.6■□□□□ 0.41
MRPL55-227ENST00000475832 ZC3H13Q5T200 1668 aaKnown RBP17.59■□□□□ 0.41
MRPL55-227ENST00000475832 MED1Q15648 1581 aaPredicted RBP17.57■□□□□ 0.4
MRPL55-227ENST00000475832 ZNF335Q9H4Z2 1342 aaPredicted RBP17.55■□□□□ 0.4
MRPL55-227ENST00000475832 VWDEQ8N2E2 1590 aa17.55■□□□□ 0.4
MRPL55-227ENST00000475832 HSPA1LP34931 641 aa17.55■□□□□ 0.4
MRPL55-227ENST00000475832 RPRD2Q5VT52 1461 aaKnown RBP17.55■□□□□ 0.4
MRPL55-227ENST00000475832 LMTK2Q8IWU2 1503 aa17.53■□□□□ 0.4
MRPL55-227ENST00000475832 PIP4K2BP78356 416 aa17.53■□□□□ 0.4
MRPL55-227ENST00000475832 ARHGAP31Q2M1Z3 1444 aa17.53■□□□□ 0.4
MRPL55-227ENST00000475832 MYO3AQ8NEV4 1616 aa17.52■□□□□ 0.4
MRPL55-227ENST00000475832 FBXO31Q5XUX0 539 aaPredicted RBP17.52■□□□□ 0.4
MRPL55-227ENST00000475832 CCDC144AA2RUR9 1427 aa17.52■□□□□ 0.4
MRPL55-227ENST00000475832 CAMSAP1Q5T5Y3 1602 aa17.51■□□□□ 0.39
MRPL55-227ENST00000475832 CEP152O94986 1710 aa17.51■□□□□ 0.39
MRPL55-227ENST00000475832 TET3O43151 1660 aa17.51■□□□□ 0.39
MRPL55-227ENST00000475832 ZNF142P52746 1687 aaPredicted RBP17.51■□□□□ 0.39
MRPL55-227ENST00000475832 PPP1R15AO75807 674 aaPredicted RBP17.5■□□□□ 0.39
MRPL55-227ENST00000475832 TNRQ92752 1358 aa17.5■□□□□ 0.39
MRPL55-227ENST00000475832 NCKAP5LQ9HCH0 1330 aa17.49■□□□□ 0.39
MRPL55-227ENST00000475832 CEP170BQ9Y4F5 1589 aaPredicted RBP17.49■□□□□ 0.39
MRPL55-227ENST00000475832 TOM1O60784 492 aa17.47■□□□□ 0.39
MRPL55-227ENST00000475832 A2ML1A8K2U0 1454 aa17.47■□□□□ 0.39
MRPL55-227ENST00000475832 ERVK-7P63135 1459 aa17.47■□□□□ 0.39
MRPL55-227ENST00000475832 NLRP1Q9C000 1473 aa17.46■□□□□ 0.39
MRPL55-227ENST00000475832 L3MBTL2Q969R5 705 aa17.45■□□□□ 0.38
MRPL55-227ENST00000475832 EFCAB6Q5THR3 1501 aa17.45■□□□□ 0.38
MRPL55-227ENST00000475832 PLA2R1Q13018 1463 aa17.44■□□□□ 0.38
MRPL55-227ENST00000475832 E9PCH4 1651 aa17.42■□□□□ 0.38
MRPL55-227ENST00000475832 TRPM2O94759 1503 aa17.42■□□□□ 0.38
MRPL55-227ENST00000475832 ZNF316A6NFI3 1004 aaPredicted RBP17.4■□□□□ 0.38
MRPL55-227ENST00000475832 NOS1P29475 1434 aa17.39■□□□□ 0.38
MRPL55-227ENST00000475832 UGGT1Q9NYU2 1555 aa17.38■□□□□ 0.37
MRPL55-227ENST00000475832 STAC3Q96MF2 364 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms