RNA–Protein interactions for RNA: ENST00000475752.1

SCG5-205, Transcript of secretogranin V, humanhuman

TSL 2

Gene SCG5, Length 867 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG5-205ENST00000475752 EPAS1Q99814 870 aa12.91□□□□□ -0.34
SCG5-205ENST00000475752 PAXIP1Q6ZW49 1069 aaPredicted RBP12.89□□□□□ -0.35
SCG5-205ENST00000475752 CFAP44Q96MT7 982 aa12.89□□□□□ -0.35
SCG5-205ENST00000475752 PTPN5P54829 565 aa12.88□□□□□ -0.35
SCG5-205ENST00000475752 COL9A1P20849 921 aa12.87□□□□□ -0.35
SCG5-205ENST00000475752 THSD4Q6ZMP0 1018 aa12.87□□□□□ -0.35
SCG5-205ENST00000475752 WNT2BQ93097 391 aa12.87□□□□□ -0.35
SCG5-205ENST00000475752 RABGEF1Q9UJ41 708 aa12.86□□□□□ -0.35
SCG5-205ENST00000475752 PROX2Q3B8N5 592 aa12.85□□□□□ -0.35
SCG5-205ENST00000475752 DDX12PQ92771 950 aa12.84□□□□□ -0.35
SCG5-205ENST00000475752 PDIA6Q15084 440 aa12.83□□□□□ -0.36
SCG5-205ENST00000475752 C6orf132Q5T0Z8 1188 aa12.83□□□□□ -0.36
SCG5-205ENST00000475752 SPDYE16A6NNV3 312 aaPredicted RBP12.82□□□□□ -0.36
SCG5-205ENST00000475752 E2F4Q16254 413 aa12.82□□□□□ -0.36
SCG5-205ENST00000475752 WDR70Q9NW82 654 aa12.82□□□□□ -0.36
SCG5-205ENST00000475752 RBM33Q96EV2 1170 aaKnown RBP12.81□□□□□ -0.36
SCG5-205ENST00000475752 NBR1Q14596 966 aa12.79□□□□□ -0.36
SCG5-205ENST00000475752 ANKK1Q8NFD2 765 aa12.79□□□□□ -0.36
SCG5-205ENST00000475752 ONECUT3O60422 494 aaPredicted RBP12.78□□□□□ -0.36
SCG5-205ENST00000475752 LAPTM4BQ86VI4 370 aa12.78□□□□□ -0.36
SCG5-205ENST00000475752 KIAA1468Q9P260 1216 aa12.77□□□□□ -0.37
SCG5-205ENST00000475752 EN1Q05925 392 aaPredicted RBP12.76□□□□□ -0.37
SCG5-205ENST00000475752 ARIH1Q9Y4X5 557 aaPredicted RBP12.76□□□□□ -0.37
SCG5-205ENST00000475752 MAP3K7O43318 606 aa12.75□□□□□ -0.37
SCG5-205ENST00000475752 TRIM6-TRIM34B2RNG4 842 aa12.74□□□□□ -0.37
SCG5-205ENST00000475752 TSR1Q2NL82 804 aaKnown RBP12.7□□□□□ -0.38
SCG5-205ENST00000475752 ZFRQ96KR1 1074 aaKnown RBP12.7□□□□□ -0.38
SCG5-205ENST00000475752 SEPT9Q9UHD8 586 aaPredicted RBP12.7□□□□□ -0.38
SCG5-205ENST00000475752 IFFO2Q5TF58 517 aa12.69□□□□□ -0.38
SCG5-205ENST00000475752 SOWAHBA6NEL2 793 aa12.68□□□□□ -0.38
SCG5-205ENST00000475752 BCAMP50895 628 aa12.68□□□□□ -0.38
SCG5-205ENST00000475752 FAM98CQ17RN3 349 aaKnown RBP12.68□□□□□ -0.38
SCG5-205ENST00000475752 GRXCR2A6NFK2 248 aa12.66□□□□□ -0.38
SCG5-205ENST00000475752 PACS2Q86VP3 889 aa12.66□□□□□ -0.38
SCG5-205ENST00000475752 CERKQ8TCT0 537 aa12.64□□□□□ -0.39
SCG5-205ENST00000475752 NYAP1Q6ZVC0 841 aa12.63□□□□□ -0.39
SCG5-205ENST00000475752 TSKSQ9UJT2 592 aa12.63□□□□□ -0.39
SCG5-205ENST00000475752 CDCA7LQ96GN5 454 aa12.61□□□□□ -0.39
SCG5-205ENST00000475752 LRCH3Q96II8 777 aa12.61□□□□□ -0.39
SCG5-205ENST00000475752 PRSS12P56730 875 aa12.6□□□□□ -0.39
SCG5-205ENST00000475752 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.6□□□□□ -0.39
SCG5-205ENST00000475752 A0A0G2JS52 829 aa12.59□□□□□ -0.39
SCG5-205ENST00000475752 PRIM1P49642 420 aaKnown RBP12.59□□□□□ -0.39
SCG5-205ENST00000475752 RGS20O76081 388 aa12.58□□□□□ -0.4
SCG5-205ENST00000475752 OSBPP22059 807 aa12.58□□□□□ -0.4
SCG5-205ENST00000475752 WBP1LQ9NX94 342 aa12.58□□□□□ -0.4
SCG5-205ENST00000475752 ITGBL1O95965 494 aaPredicted RBP12.57□□□□□ -0.4
SCG5-205ENST00000475752 TSR3Q9UJK0 312 aaKnown RBP12.57□□□□□ -0.4
SCG5-205ENST00000475752 TSHZ2Q9NRE2 1034 aa12.56□□□□□ -0.4
SCG5-205ENST00000475752 NBPF26B4DH59 902 aa12.55□□□□□ -0.4
SCG5-205ENST00000475752 HPS5Q9UPZ3 1129 aa12.55□□□□□ -0.4
SCG5-205ENST00000475752 CDHR5Q9HBB8 845 aa12.54□□□□□ -0.4
SCG5-205ENST00000475752 RBM27Q9P2N5 1060 aaKnown RBP12.53□□□□□ -0.4
SCG5-205ENST00000475752 SMAPO00193 183 aa12.52□□□□□ -0.41
SCG5-205ENST00000475752 FAM198AQ9UFP1 575 aa12.52□□□□□ -0.41
SCG5-205ENST00000475752 ARHGEF1Q92888 912 aaKnown RBP12.51□□□□□ -0.41
SCG5-205ENST00000475752 PNMA3Q9UL41 463 aa12.51□□□□□ -0.41
SCG5-205ENST00000475752 TATDN2Q93075 761 aa12.5□□□□□ -0.41
SCG5-205ENST00000475752 PPP4CP60510 307 aa12.48□□□□□ -0.41
SCG5-205ENST00000475752 KCNC4Q03721 635 aa12.48□□□□□ -0.41
SCG5-205ENST00000475752 SAMD7Q7Z3H4 446 aa12.48□□□□□ -0.41
SCG5-205ENST00000475752 KCNV2Q8TDN2 545 aa12.47□□□□□ -0.41
SCG5-205ENST00000475752 NUDT18Q6ZVK8 323 aa12.46□□□□□ -0.41
SCG5-205ENST00000475752 C3orf80F5H4A9 247 aa12.45□□□□□ -0.42
SCG5-205ENST00000475752 HDGFP51858 240 aaKnown RBP12.44□□□□□ -0.42
SCG5-205ENST00000475752 PADI6Q6TGC4 694 aa12.43□□□□□ -0.42
SCG5-205ENST00000475752 TTC13Q8NBP0 860 aa12.42□□□□□ -0.42
SCG5-205ENST00000475752 NPDC1Q9NQX5 325 aaPredicted RBP12.42□□□□□ -0.42
SCG5-205ENST00000475752 MLLT3P42568 568 aaPredicted RBP12.41□□□□□ -0.42
SCG5-205ENST00000475752 P3H3Q8IVL6 736 aa12.41□□□□□ -0.42
SCG5-205ENST00000475752 RNF40O75150 1001 aa12.4□□□□□ -0.42
SCG5-205ENST00000475752 NECTIN2Q92692 538 aa12.37□□□□□ -0.43
SCG5-205ENST00000475752 IRX2Q9BZI1 471 aaPredicted RBP12.37□□□□□ -0.43
SCG5-205ENST00000475752 SLC4A3P48751 1232 aa12.34□□□□□ -0.43
SCG5-205ENST00000475752 SLF2Q8IX21 1173 aa12.34□□□□□ -0.43
SCG5-205ENST00000475752 TJAP1Q5JTD0 557 aa12.33□□□□□ -0.44
SCG5-205ENST00000475752 SWT1Q5T5J6 900 aaKnown RBP12.33□□□□□ -0.44
SCG5-205ENST00000475752 PTGDRQ13258 359 aa12.32□□□□□ -0.44
SCG5-205ENST00000475752 MTRQ99707 1265 aa12.32□□□□□ -0.44
SCG5-205ENST00000475752 IL21Q9HBE4 155 aa12.32□□□□□ -0.44
SCG5-205ENST00000475752 EYA1Q99502 592 aa12.3□□□□□ -0.44
SCG5-205ENST00000475752 NUTM2FA1L443 756 aa12.29□□□□□ -0.44
SCG5-205ENST00000475752 APLP1P51693 650 aa12.29□□□□□ -0.44
SCG5-205ENST00000475752 PLCB2Q00722 1185 aa12.28□□□□□ -0.44
SCG5-205ENST00000475752 RBM46Q8TBY0 533 aaKnown RBP12.26□□□□□ -0.45
SCG5-205ENST00000475752 SEMA3EO15041 775 aa12.25□□□□□ -0.45
SCG5-205ENST00000475752 DNAJB2P25686 324 aa12.25□□□□□ -0.45
SCG5-205ENST00000475752 PRR14Q9BWN1 585 aa12.24□□□□□ -0.45
SCG5-205ENST00000475752 FCHSD2O94868 740 aa12.23□□□□□ -0.45
SCG5-205ENST00000475752 ADGRG1Q9Y653 693 aa12.23□□□□□ -0.45
SCG5-205ENST00000475752 ZNF516Q92618 1163 aa12.21□□□□□ -0.45
SCG5-205ENST00000475752 TMEM134Q9H6X4 195 aa12.2□□□□□ -0.46
SCG5-205ENST00000475752 COPS2P61201 443 aa12.19□□□□□ -0.46
SCG5-205ENST00000475752 PPP1R18Q6NYC8 613 aa12.19□□□□□ -0.46
SCG5-205ENST00000475752 RCCD1A6NED2 376 aa12.17□□□□□ -0.46
SCG5-205ENST00000475752 SMYD5Q6GMV2 418 aa12.17□□□□□ -0.46
SCG5-205ENST00000475752 PCDHB3Q9Y5E6 796 aa12.17□□□□□ -0.46
SCG5-205ENST00000475752 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.16□□□□□ -0.46
SCG5-205ENST00000475752 TESPA1A2RU30 521 aaPredicted RBP12.15□□□□□ -0.46
SCG5-205ENST00000475752 GGCXP38435 758 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms