RNA–Protein interactions for RNA: ENST00000475651.5

RBM39-229, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 555 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-229ENST00000475651 IRX2Q9BZI1 471 aaPredicted RBP8.79□□□□□ -1
RBM39-229ENST00000475651 PCDHGA10Q9Y5H3 936 aa8.79□□□□□ -1
RBM39-229ENST00000475651 NYAP1Q6ZVC0 841 aa8.78□□□□□ -1
RBM39-229ENST00000475651 BBXQ8WY36 941 aaPredicted RBP8.78□□□□□ -1
RBM39-229ENST00000475651 EMILIN3Q9NT22 766 aa8.78□□□□□ -1
RBM39-229ENST00000475651 ONECUT3O60422 494 aaPredicted RBP8.76□□□□□ -1.01
RBM39-229ENST00000475651 WDR70Q9NW82 654 aa8.75□□□□□ -1.01
RBM39-229ENST00000475651 DPYSL4O14531 572 aa8.74□□□□□ -1.01
RBM39-229ENST00000475651 PROX2Q3B8N5 592 aa8.73□□□□□ -1.01
RBM39-229ENST00000475651 SPRYD3Q8NCJ5 442 aa8.73□□□□□ -1.01
RBM39-229ENST00000475651 CAMK2BQ13554 666 aa8.72□□□□□ -1.01
RBM39-229ENST00000475651 C6orf132Q5T0Z8 1188 aa8.72□□□□□ -1.01
RBM39-229ENST00000475651 PACS2Q86VP3 889 aa8.72□□□□□ -1.01
RBM39-229ENST00000475651 KIAA1468Q9P260 1216 aa8.72□□□□□ -1.01
RBM39-229ENST00000475651 A0A0G2JS52 829 aa8.71□□□□□ -1.02
RBM39-229ENST00000475651 SOWAHBA6NEL2 793 aa8.71□□□□□ -1.02
RBM39-229ENST00000475651 SPDYE16A6NNV3 312 aaPredicted RBP8.71□□□□□ -1.02
RBM39-229ENST00000475651 CADPS2Q86UW7 1296 aa8.71□□□□□ -1.02
RBM39-229ENST00000475651 RBM33Q96EV2 1170 aaKnown RBP8.71□□□□□ -1.02
RBM39-229ENST00000475651 COL9A1P20849 921 aa8.7□□□□□ -1.02
RBM39-229ENST00000475651 FAM98CQ17RN3 349 aaKnown RBP8.7□□□□□ -1.02
RBM39-229ENST00000475651 DDX12PQ92771 950 aa8.7□□□□□ -1.02
RBM39-229ENST00000475651 LRCH3Q96II8 777 aa8.7□□□□□ -1.02
RBM39-229ENST00000475651 ZFRQ96KR1 1074 aaKnown RBP8.7□□□□□ -1.02
RBM39-229ENST00000475651 TRIM6-TRIM34B2RNG4 842 aa8.69□□□□□ -1.02
RBM39-229ENST00000475651 MAP3K7O43318 606 aa8.69□□□□□ -1.02
RBM39-229ENST00000475651 NBR1Q14596 966 aa8.69□□□□□ -1.02
RBM39-229ENST00000475651 HDGFP51858 240 aaKnown RBP8.68□□□□□ -1.02
RBM39-229ENST00000475651 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.68□□□□□ -1.02
RBM39-229ENST00000475651 BCAMP50895 628 aa8.67□□□□□ -1.02
RBM39-229ENST00000475651 KCNC4Q03721 635 aa8.67□□□□□ -1.02
RBM39-229ENST00000475651 CERKQ8TCT0 537 aa8.67□□□□□ -1.02
RBM39-229ENST00000475651 AMER1Q5JTC6 1135 aaPredicted RBP8.66□□□□□ -1.02
RBM39-229ENST00000475651 SEPT9Q9UHD8 586 aaPredicted RBP8.66□□□□□ -1.02
RBM39-229ENST00000475651 ITGBL1O95965 494 aaPredicted RBP8.65□□□□□ -1.02
RBM39-229ENST00000475651 TSR3Q9UJK0 312 aaKnown RBP8.65□□□□□ -1.02
RBM39-229ENST00000475651 EN1Q05925 392 aaPredicted RBP8.64□□□□□ -1.03
RBM39-229ENST00000475651 PDIA6Q15084 440 aa8.64□□□□□ -1.03
RBM39-229ENST00000475651 E2F4Q16254 413 aa8.64□□□□□ -1.03
RBM39-229ENST00000475651 SLC4A3P48751 1232 aa8.63□□□□□ -1.03
RBM39-229ENST00000475651 NECTIN2Q92692 538 aa8.63□□□□□ -1.03
RBM39-229ENST00000475651 HPS5Q9UPZ3 1129 aa8.63□□□□□ -1.03
RBM39-229ENST00000475651 PPP4CP60510 307 aa8.62□□□□□ -1.03
RBM39-229ENST00000475651 NBPF26B4DH59 902 aa8.61□□□□□ -1.03
RBM39-229ENST00000475651 CFAP44Q96MT7 982 aa8.61□□□□□ -1.03
RBM39-229ENST00000475651 WBP1LQ9NX94 342 aa8.61□□□□□ -1.03
RBM39-229ENST00000475651 GRXCR2A6NFK2 248 aa8.58□□□□□ -1.04
RBM39-229ENST00000475651 PAXIP1Q6ZW49 1069 aaPredicted RBP8.58□□□□□ -1.04
RBM39-229ENST00000475651 PRSS12P56730 875 aa8.57□□□□□ -1.04
RBM39-229ENST00000475651 CDCA7LQ96GN5 454 aa8.57□□□□□ -1.04
RBM39-229ENST00000475651 RNF40O75150 1001 aa8.56□□□□□ -1.04
RBM39-229ENST00000475651 TSR1Q2NL82 804 aaKnown RBP8.56□□□□□ -1.04
RBM39-229ENST00000475651 LAPTM4AQ15012 233 aa8.55□□□□□ -1.04
RBM39-229ENST00000475651 TSKSQ9UJT2 592 aa8.54□□□□□ -1.04
RBM39-229ENST00000475651 PNMA3Q9UL41 463 aa8.54□□□□□ -1.04
RBM39-229ENST00000475651 ARIH1Q9Y4X5 557 aaPredicted RBP8.54□□□□□ -1.04
RBM39-229ENST00000475651 Q6ZNB5 142 aa8.53□□□□□ -1.04
RBM39-229ENST00000475651 SAMD7Q7Z3H4 446 aa8.52□□□□□ -1.05
RBM39-229ENST00000475651 TATDN2Q93075 761 aa8.52□□□□□ -1.05
RBM39-229ENST00000475651 RBM27Q9P2N5 1060 aaKnown RBP8.52□□□□□ -1.05
RBM39-229ENST00000475651 GGCXP38435 758 aa8.5□□□□□ -1.05
RBM39-229ENST00000475651 IL21Q9HBE4 155 aa8.5□□□□□ -1.05
RBM39-229ENST00000475651 SLF2Q8IX21 1173 aa8.49□□□□□ -1.05
RBM39-229ENST00000475651 PRR14Q9BWN1 585 aa8.49□□□□□ -1.05
RBM39-229ENST00000475651 SMAPO00193 183 aa8.48□□□□□ -1.05
RBM39-229ENST00000475651 NUDT18Q6ZVK8 323 aa8.47□□□□□ -1.05
RBM39-229ENST00000475651 OSBPP22059 807 aa8.44□□□□□ -1.06
RBM39-229ENST00000475651 MTRQ99707 1265 aa8.44□□□□□ -1.06
RBM39-229ENST00000475651 TJAP1Q5JTD0 557 aa8.42□□□□□ -1.06
RBM39-229ENST00000475651 GFRA3O60609 400 aa8.41□□□□□ -1.06
RBM39-229ENST00000475651 V9GY48 417 aaPredicted RBP8.41□□□□□ -1.06
RBM39-229ENST00000475651 ARHGEF1Q92888 912 aaKnown RBP8.4□□□□□ -1.06
RBM39-229ENST00000475651 PRKD2Q9BZL6 878 aa8.4□□□□□ -1.06
RBM39-229ENST00000475651 CDHR5Q9HBB8 845 aa8.4□□□□□ -1.06
RBM39-229ENST00000475651 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.4□□□□□ -1.06
RBM39-229ENST00000475651 LCE2BO14633 110 aa8.39□□□□□ -1.07
RBM39-229ENST00000475651 SWT1Q5T5J6 900 aaKnown RBP8.39□□□□□ -1.07
RBM39-229ENST00000475651 PADI6Q6TGC4 694 aa8.39□□□□□ -1.07
RBM39-229ENST00000475651 P3H3Q8IVL6 736 aa8.39□□□□□ -1.07
RBM39-229ENST00000475651 RTN4Q9NQC3 1192 aaKnown RBP8.39□□□□□ -1.07
RBM39-229ENST00000475651 FAM198AQ9UFP1 575 aa8.39□□□□□ -1.07
RBM39-229ENST00000475651 PPP1R18Q6NYC8 613 aa8.38□□□□□ -1.07
RBM39-229ENST00000475651 RBM46Q8TBY0 533 aaKnown RBP8.38□□□□□ -1.07
RBM39-229ENST00000475651 NRG2O14511 850 aaPredicted RBP8.37□□□□□ -1.07
RBM39-229ENST00000475651 APLP1P51693 650 aa8.36□□□□□ -1.07
RBM39-229ENST00000475651 COPS2P61201 443 aa8.36□□□□□ -1.07
RBM39-229ENST00000475651 KMT5BQ4FZB7 885 aa8.36□□□□□ -1.07
RBM39-229ENST00000475651 TMUB1Q9BVT8 246 aa8.36□□□□□ -1.07
RBM39-229ENST00000475651 PCDHB3Q9Y5E6 796 aa8.36□□□□□ -1.07
RBM39-229ENST00000475651 DNAJB2P25686 324 aa8.35□□□□□ -1.07
RBM39-229ENST00000475651 RSPH4AQ5TD94 716 aa8.35□□□□□ -1.07
RBM39-229ENST00000475651 PRIM1P49642 420 aaKnown RBP8.34□□□□□ -1.07
RBM39-229ENST00000475651 TRAF7Q6Q0C0 670 aa8.34□□□□□ -1.07
RBM39-229ENST00000475651 NUTM2FA1L443 756 aa8.33□□□□□ -1.08
RBM39-229ENST00000475651 TTC13Q8NBP0 860 aa8.33□□□□□ -1.08
RBM39-229ENST00000475651 ZPR1O75312 459 aa8.32□□□□□ -1.08
RBM39-229ENST00000475651 ZNF516Q92618 1163 aa8.32□□□□□ -1.08
RBM39-229ENST00000475651 NPDC1Q9NQX5 325 aaPredicted RBP8.31□□□□□ -1.08
RBM39-229ENST00000475651 PDZRN3Q9UPQ7 1066 aa8.31□□□□□ -1.08
RBM39-229ENST00000475651 C3orf80F5H4A9 247 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms