RNA–Protein interactions for RNA: ENST00000475607.1

RABGAP1-209, Transcript of RAB GTPase activating protein 1, humanhuman

TSL 4

Gene RABGAP1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1-209ENST00000475607 LHX6Q9UPM6 363 aa11.38□□□□□ -0.59
RABGAP1-209ENST00000475607 ZDHHC16Q969W1 377 aa11.37□□□□□ -0.59
RABGAP1-209ENST00000475607 RBM33Q96EV2 1170 aaKnown RBP11.37□□□□□ -0.59
RABGAP1-209ENST00000475607 FCHSD2O94868 740 aa11.36□□□□□ -0.59
RABGAP1-209ENST00000475607 ERBB3P21860 1342 aa11.35□□□□□ -0.59
RABGAP1-209ENST00000475607 POTEB3A0JP26 581 aa11.34□□□□□ -0.59
RABGAP1-209ENST00000475607 GPR37O15354 613 aa11.34□□□□□ -0.59
RABGAP1-209ENST00000475607 HIC1Q14526 733 aa11.34□□□□□ -0.59
RABGAP1-209ENST00000475607 PPP4R3BQ5MIZ7 849 aa11.34□□□□□ -0.59
RABGAP1-209ENST00000475607 POTEBQ6S5H4 581 aa11.34□□□□□ -0.59
RABGAP1-209ENST00000475607 KRI1Q8N9T8 703 aaKnown RBP11.34□□□□□ -0.59
RABGAP1-209ENST00000475607 KRTAP3-3Q9BYR6 98 aa11.34□□□□□ -0.59
RABGAP1-209ENST00000475607 KRTAP3-2Q9BYR7 98 aa11.34□□□□□ -0.59
RABGAP1-209ENST00000475607 PTGDRQ13258 359 aa11.33□□□□□ -0.6
RABGAP1-209ENST00000475607 SLC24A3Q9HC58 644 aa11.32□□□□□ -0.6
RABGAP1-209ENST00000475607 GNPATO15228 680 aa11.31□□□□□ -0.6
RABGAP1-209ENST00000475607 TSR1Q2NL82 804 aaKnown RBP11.3□□□□□ -0.6
RABGAP1-209ENST00000475607 C6orf132Q5T0Z8 1188 aa11.3□□□□□ -0.6
RABGAP1-209ENST00000475607 ADAM33Q9BZ11 813 aa11.3□□□□□ -0.6
RABGAP1-209ENST00000475607 CDHR5Q9HBB8 845 aa11.3□□□□□ -0.6
RABGAP1-209ENST00000475607 CERKQ8TCT0 537 aa11.29□□□□□ -0.6
RABGAP1-209ENST00000475607 AK7Q96M32 723 aa11.28□□□□□ -0.6
RABGAP1-209ENST00000475607 NPDC1Q9NQX5 325 aaPredicted RBP11.27□□□□□ -0.61
RABGAP1-209ENST00000475607 MINK1Q8N4C8 1332 aaPredicted RBP11.27□□□□□ -0.61
RABGAP1-209ENST00000475607 MAP2K5Q13163 448 aa11.26□□□□□ -0.61
RABGAP1-209ENST00000475607 BCL2L12Q9HB09 334 aa11.26□□□□□ -0.61
RABGAP1-209ENST00000475607 VARS2Q5ST30 1063 aaKnown RBP11.25□□□□□ -0.61
RABGAP1-209ENST00000475607 PTPREP23469 700 aa11.23□□□□□ -0.61
RABGAP1-209ENST00000475607 IRF6O14896 467 aa11.22□□□□□ -0.61
RABGAP1-209ENST00000475607 FECHP22830 423 aa11.22□□□□□ -0.61
RABGAP1-209ENST00000475607 KCNH8Q96L42 1107 aa11.21□□□□□ -0.61
RABGAP1-209ENST00000475607 CCDC102AQ96A19 550 aa11.19□□□□□ -0.62
RABGAP1-209ENST00000475607 RBM27Q9P2N5 1060 aaKnown RBP11.19□□□□□ -0.62
RABGAP1-209ENST00000475607 PPP1R3GB7ZBB8 358 aa11.18□□□□□ -0.62
RABGAP1-209ENST00000475607 TRIM66O15016 1216 aa11.17□□□□□ -0.62
RABGAP1-209ENST00000475607 PRSS12P56730 875 aa11.17□□□□□ -0.62
RABGAP1-209ENST00000475607 COL9A1P20849 921 aa11.16□□□□□ -0.62
RABGAP1-209ENST00000475607 PADI6Q6TGC4 694 aa11.16□□□□□ -0.62
RABGAP1-209ENST00000475607 CDCA7LQ96GN5 454 aa11.16□□□□□ -0.62
RABGAP1-209ENST00000475607 KCNK17Q96T54 332 aa11.16□□□□□ -0.62
RABGAP1-209ENST00000475607 BRPF1P55201 1214 aaPredicted RBP11.15□□□□□ -0.62
RABGAP1-209ENST00000475607 NEUROD2Q15784 382 aa11.15□□□□□ -0.62
RABGAP1-209ENST00000475607 RNF166Q96A37 237 aaPredicted RBP11.15□□□□□ -0.62
RABGAP1-209ENST00000475607 ZNF687Q8N1G0 1237 aa11.14□□□□□ -0.63
RABGAP1-209ENST00000475607 ARHGAP33O14559 1287 aa11.13□□□□□ -0.63
RABGAP1-209ENST00000475607 TTC13Q8NBP0 860 aa11.13□□□□□ -0.63
RABGAP1-209ENST00000475607 OATP04181 439 aa11.12□□□□□ -0.63
RABGAP1-209ENST00000475607 PBX2P40425 430 aa11.12□□□□□ -0.63
RABGAP1-209ENST00000475607 PDE4DQ08499 809 aa11.12□□□□□ -0.63
RABGAP1-209ENST00000475607 MYT1LQ9UL68 1186 aa11.11□□□□□ -0.63
RABGAP1-209ENST00000475607 AMHR2Q16671 573 aa11.1□□□□□ -0.63
RABGAP1-209ENST00000475607 ADGRG1Q9Y653 693 aa11.1□□□□□ -0.63
RABGAP1-209ENST00000475607 TRIM6-TRIM34B2RNG4 842 aa11.09□□□□□ -0.63
RABGAP1-209ENST00000475607 PSEN2P49810 448 aa11.09□□□□□ -0.63
RABGAP1-209ENST00000475607 ONECUT3O60422 494 aaPredicted RBP11.08□□□□□ -0.64
RABGAP1-209ENST00000475607 PACS2Q86VP3 889 aa11.08□□□□□ -0.64
RABGAP1-209ENST00000475607 RBM46Q8TBY0 533 aaKnown RBP11.08□□□□□ -0.64
RABGAP1-209ENST00000475607 TSKSQ9UJT2 592 aa11.08□□□□□ -0.64
RABGAP1-209ENST00000475607 FAM161AQ3B820 660 aa11.07□□□□□ -0.64
RABGAP1-209ENST00000475607 METTL3Q86U44 580 aaKnown RBP11.07□□□□□ -0.64
RABGAP1-209ENST00000475607 POTEEQ6S8J3 1075 aa11.06□□□□□ -0.64
RABGAP1-209ENST00000475607 ZBED2Q9BTP6 218 aa11.06□□□□□ -0.64
RABGAP1-209ENST00000475607 FAM198AQ9UFP1 575 aa11.06□□□□□ -0.64
RABGAP1-209ENST00000475607 AXIN2Q9Y2T1 843 aa11.06□□□□□ -0.64
RABGAP1-209ENST00000475607 NBPF26B4DH59 902 aa11.05□□□□□ -0.64
RABGAP1-209ENST00000475607 TTLL12Q14166 644 aaPredicted RBP11.05□□□□□ -0.64
RABGAP1-209ENST00000475607 PROX2Q3B8N5 592 aa11.05□□□□□ -0.64
RABGAP1-209ENST00000475607 PXYLP1Q8TE99 480 aa11.05□□□□□ -0.64
RABGAP1-209ENST00000475607 SLC4A5Q9BY07 1137 aa11.05□□□□□ -0.64
RABGAP1-209ENST00000475607 ANKRD13DQ6ZTN6 518 aa11.04□□□□□ -0.64
RABGAP1-209ENST00000475607 KDM4CQ9H3R0 1056 aa11.04□□□□□ -0.64
RABGAP1-209ENST00000475607 GPBP1L1Q9HC44 474 aaPredicted RBP11.04□□□□□ -0.64
RABGAP1-209ENST00000475607 DMRTA1Q5VZB9 504 aa11.03□□□□□ -0.64
RABGAP1-209ENST00000475607 TATDN2Q93075 761 aa11.03□□□□□ -0.64
RABGAP1-209ENST00000475607 CLCN1P35523 988 aa11.02□□□□□ -0.65
RABGAP1-209ENST00000475607 NUDT18Q6ZVK8 323 aa11.02□□□□□ -0.65
RABGAP1-209ENST00000475607 PARP9Q8IXQ6 854 aa11.02□□□□□ -0.65
RABGAP1-209ENST00000475607 PHOX2BQ99453 314 aa11.02□□□□□ -0.65
RABGAP1-209ENST00000475607 PNMA3Q9UL41 463 aa11.02□□□□□ -0.65
RABGAP1-209ENST00000475607 EYA1Q99502 592 aa11.01□□□□□ -0.65
RABGAP1-209ENST00000475607 KIAA1468Q9P260 1216 aa11.01□□□□□ -0.65
RABGAP1-209ENST00000475607 DAXXQ9UER7 740 aaPredicted RBP11.01□□□□□ -0.65
RABGAP1-209ENST00000475607 RABGEF1Q9UJ41 708 aa11.01□□□□□ -0.65
RABGAP1-209ENST00000475607 MDM2Q00987 491 aaPredicted RBP11□□□□□ -0.65
RABGAP1-209ENST00000475607 TMEM132AQ24JP5 1023 aa11□□□□□ -0.65
RABGAP1-209ENST00000475607 GPCPD1Q9NPB8 672 aa11□□□□□ -0.65
RABGAP1-209ENST00000475607 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.99□□□□□ -0.65
RABGAP1-209ENST00000475607 VPS9D1Q9Y2B5 631 aa10.99□□□□□ -0.65
RABGAP1-209ENST00000475607 LSM11P83369 360 aaKnown RBP eCLIP10.98□□□□□ -0.65
RABGAP1-209ENST00000475607 RCCD1A6NED2 376 aa10.97□□□□□ -0.65
RABGAP1-209ENST00000475607 TK2O00142 265 aa10.97□□□□□ -0.65
RABGAP1-209ENST00000475607 GIGYF2Q6Y7W6 1299 aaKnown RBP10.97□□□□□ -0.65
RABGAP1-209ENST00000475607 TMUB1Q9BVT8 246 aa10.97□□□□□ -0.65
RABGAP1-209ENST00000475607 C3orf80F5H4A9 247 aa10.96□□□□□ -0.65
RABGAP1-209ENST00000475607 DNAJB2P25686 324 aa10.96□□□□□ -0.65
RABGAP1-209ENST00000475607 SMAPO00193 183 aa10.95□□□□□ -0.66
RABGAP1-209ENST00000475607 NLRP7Q8WX94 980 aa10.95□□□□□ -0.66
RABGAP1-209ENST00000475607 REPIN1Q9BWE0 567 aaKnown RBP10.95□□□□□ -0.66
RABGAP1-209ENST00000475607 NBPF3Q9H094 633 aa10.94□□□□□ -0.66
RABGAP1-209ENST00000475607 DDRGK1Q96HY6 314 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms