RNA–Protein interactions for RNA: ENST00000475542.1

SEC23IP-206, Transcript of SEC23 interacting protein, humanhuman

TSL 3

Gene SEC23IP, Length 552 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23IP-206ENST00000475542 C6orf132Q5T0Z8 1188 aa10.11□□□□□ -0.79
SEC23IP-206ENST00000475542 PTPREP23469 700 aa10.1□□□□□ -0.79
SEC23IP-206ENST00000475542 RBM26Q5T8P6 1007 aaKnown RBP10.1□□□□□ -0.79
SEC23IP-206ENST00000475542 SMYD5Q6GMV2 418 aa10.1□□□□□ -0.79
SEC23IP-206ENST00000475542 DMRTA1Q5VZB9 504 aa10.09□□□□□ -0.79
SEC23IP-206ENST00000475542 KRTAP3-3Q9BYR6 98 aa10.09□□□□□ -0.79
SEC23IP-206ENST00000475542 KRTAP3-2Q9BYR7 98 aa10.09□□□□□ -0.79
SEC23IP-206ENST00000475542 COL9A1P20849 921 aa10.08□□□□□ -0.8
SEC23IP-206ENST00000475542 PBX2P40425 430 aa10.08□□□□□ -0.8
SEC23IP-206ENST00000475542 ANKRD13DQ6ZTN6 518 aa10.07□□□□□ -0.8
SEC23IP-206ENST00000475542 BCANQ96GW7 911 aa10.07□□□□□ -0.8
SEC23IP-206ENST00000475542 KCNH8Q96L42 1107 aa10.07□□□□□ -0.8
SEC23IP-206ENST00000475542 CDHR5Q9HBB8 845 aa10.07□□□□□ -0.8
SEC23IP-206ENST00000475542 NUTM2FA1L443 756 aa10.06□□□□□ -0.8
SEC23IP-206ENST00000475542 TULP1O00294 542 aaPredicted RBP10.05□□□□□ -0.8
SEC23IP-206ENST00000475542 LSM11P83369 360 aaKnown RBP eCLIP10.04□□□□□ -0.8
SEC23IP-206ENST00000475542 PPP1R3GB7ZBB8 358 aa10.02□□□□□ -0.81
SEC23IP-206ENST00000475542 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.02□□□□□ -0.81
SEC23IP-206ENST00000475542 PCDH10Q9P2E7 1040 aa10.02□□□□□ -0.81
SEC23IP-206ENST00000475542 PROX2Q3B8N5 592 aa10.01□□□□□ -0.81
SEC23IP-206ENST00000475542 ZBED2Q9BTP6 218 aa10□□□□□ -0.81
SEC23IP-206ENST00000475542 NPDC1Q9NQX5 325 aaPredicted RBP10□□□□□ -0.81
SEC23IP-206ENST00000475542 LMOD2Q6P5Q4 547 aa9.99□□□□□ -0.81
SEC23IP-206ENST00000475542 PTGDRQ13258 359 aa9.98□□□□□ -0.81
SEC23IP-206ENST00000475542 ADGRD1Q6QNK2 874 aa9.98□□□□□ -0.81
SEC23IP-206ENST00000475542 GPIHBP1Q8IV16 184 aa9.98□□□□□ -0.81
SEC23IP-206ENST00000475542 VPS9D1Q9Y2B5 631 aa9.98□□□□□ -0.81
SEC23IP-206ENST00000475542 CERKQ8TCT0 537 aa9.96□□□□□ -0.82
SEC23IP-206ENST00000475542 CDCA7LQ96GN5 454 aa9.96□□□□□ -0.82
SEC23IP-206ENST00000475542 FCHSD2O94868 740 aa9.95□□□□□ -0.82
SEC23IP-206ENST00000475542 PRSS12P56730 875 aa9.95□□□□□ -0.82
SEC23IP-206ENST00000475542 TRIM6-TRIM34B2RNG4 842 aa9.94□□□□□ -0.82
SEC23IP-206ENST00000475542 TK2O00142 265 aa9.94□□□□□ -0.82
SEC23IP-206ENST00000475542 SLC4A5Q9BY07 1137 aa9.94□□□□□ -0.82
SEC23IP-206ENST00000475542 KIAA1468Q9P260 1216 aa9.94□□□□□ -0.82
SEC23IP-206ENST00000475542 FAM198AQ9UFP1 575 aa9.94□□□□□ -0.82
SEC23IP-206ENST00000475542 TSKSQ9UJT2 592 aa9.94□□□□□ -0.82
SEC23IP-206ENST00000475542 GPR37O15354 613 aa9.93□□□□□ -0.82
SEC23IP-206ENST00000475542 PADI6Q6TGC4 694 aa9.93□□□□□ -0.82
SEC23IP-206ENST00000475542 HRO43593 1189 aa9.91□□□□□ -0.82
SEC23IP-206ENST00000475542 FECHP22830 423 aa9.91□□□□□ -0.82
SEC23IP-206ENST00000475542 SPNS2Q8IVW8 549 aa9.91□□□□□ -0.82
SEC23IP-206ENST00000475542 RABGEF1Q9UJ41 708 aa9.9□□□□□ -0.82
SEC23IP-206ENST00000475542 C3orf80F5H4A9 247 aa9.89□□□□□ -0.83
SEC23IP-206ENST00000475542 SMAPO00193 183 aa9.89□□□□□ -0.83
SEC23IP-206ENST00000475542 GNPATO15228 680 aa9.89□□□□□ -0.83
SEC23IP-206ENST00000475542 HIC1Q14526 733 aa9.89□□□□□ -0.83
SEC23IP-206ENST00000475542 FAM161AQ3B820 660 aa9.89□□□□□ -0.83
SEC23IP-206ENST00000475542 PACS2Q86VP3 889 aa9.89□□□□□ -0.83
SEC23IP-206ENST00000475542 STAC3Q96MF2 364 aa9.89□□□□□ -0.83
SEC23IP-206ENST00000475542 BHMG1C9JSJ3 638 aaPredicted RBP9.88□□□□□ -0.83
SEC23IP-206ENST00000475542 ONECUT3O60422 494 aaPredicted RBP9.88□□□□□ -0.83
SEC23IP-206ENST00000475542 TTC13Q8NBP0 860 aa9.88□□□□□ -0.83
SEC23IP-206ENST00000475542 ZC3H15Q8WU90 426 aaKnown RBP9.88□□□□□ -0.83
SEC23IP-206ENST00000475542 SEPT9Q9UHD8 586 aaPredicted RBP9.88□□□□□ -0.83
SEC23IP-206ENST00000475542 NUDT18Q6ZVK8 323 aa9.86□□□□□ -0.83
SEC23IP-206ENST00000475542 RBM27Q9P2N5 1060 aaKnown RBP9.86□□□□□ -0.83
SEC23IP-206ENST00000475542 MRPL50Q8N5N7 158 aaKnown RBP9.85□□□□□ -0.83
SEC23IP-206ENST00000475542 TATDN2Q93075 761 aa9.85□□□□□ -0.83
SEC23IP-206ENST00000475542 NBPF3Q9H094 633 aa9.85□□□□□ -0.83
SEC23IP-206ENST00000475542 PNMA3Q9UL41 463 aa9.85□□□□□ -0.83
SEC23IP-206ENST00000475542 MYT1LQ9UL68 1186 aa9.83□□□□□ -0.84
SEC23IP-206ENST00000475542 NBPF26B4DH59 902 aa9.82□□□□□ -0.84
SEC23IP-206ENST00000475542 ADGRG1Q9Y653 693 aa9.82□□□□□ -0.84
SEC23IP-206ENST00000475542 GOLGA8CPA6NN73 597 aa9.81□□□□□ -0.84
SEC23IP-206ENST00000475542 ZMYND10O75800 440 aa9.81□□□□□ -0.84
SEC23IP-206ENST00000475542 MMRN1Q13201 1228 aa9.8□□□□□ -0.84
SEC23IP-206ENST00000475542 KRI1Q8N9T8 703 aaKnown RBP9.8□□□□□ -0.84
SEC23IP-206ENST00000475542 FAM98CQ17RN3 349 aaKnown RBP9.79□□□□□ -0.84
SEC23IP-206ENST00000475542 BARGINQ6ZT62 677 aa9.79□□□□□ -0.84
SEC23IP-206ENST00000475542 EYA1Q99502 592 aa9.79□□□□□ -0.84
SEC23IP-206ENST00000475542 MAP2K5Q13163 448 aa9.78□□□□□ -0.84
SEC23IP-206ENST00000475542 LAPTM4BQ86VI4 370 aa9.78□□□□□ -0.84
SEC23IP-206ENST00000475542 RBM46Q8TBY0 533 aaKnown RBP9.78□□□□□ -0.84
SEC23IP-206ENST00000475542 KCTD12Q96CX2 325 aaKnown RBP9.78□□□□□ -0.84
SEC23IP-206ENST00000475542 ZFRQ96KR1 1074 aaKnown RBP9.78□□□□□ -0.84
SEC23IP-206ENST00000475542 PLSCR2Q9NRY7 297 aa9.78□□□□□ -0.84
SEC23IP-206ENST00000475542 IRF6O14896 467 aa9.77□□□□□ -0.85
SEC23IP-206ENST00000475542 WNT2BQ93097 391 aa9.77□□□□□ -0.85
SEC23IP-206ENST00000475542 OATP04181 439 aa9.76□□□□□ -0.85
SEC23IP-206ENST00000475542 NLRP7Q8WX94 980 aa9.76□□□□□ -0.85
SEC23IP-206ENST00000475542 RNF166Q96A37 237 aaPredicted RBP9.76□□□□□ -0.85
SEC23IP-206ENST00000475542 MINK1Q8N4C8 1332 aaPredicted RBP9.76□□□□□ -0.85
SEC23IP-206ENST00000475542 METTL3Q86U44 580 aaKnown RBP9.75□□□□□ -0.85
SEC23IP-206ENST00000475542 PXYLP1Q8TE99 480 aa9.75□□□□□ -0.85
SEC23IP-206ENST00000475542 PHOX2BQ99453 314 aa9.75□□□□□ -0.85
SEC23IP-206ENST00000475542 RCCD1A6NED2 376 aa9.74□□□□□ -0.85
SEC23IP-206ENST00000475542 SAMD7Q7Z3H4 446 aa9.74□□□□□ -0.85
SEC23IP-206ENST00000475542 CCDC102AQ96A19 550 aa9.74□□□□□ -0.85
SEC23IP-206ENST00000475542 BCAMP50895 628 aa9.73□□□□□ -0.85
SEC23IP-206ENST00000475542 TPRNQ4KMQ1 711 aa9.73□□□□□ -0.85
SEC23IP-206ENST00000475542 ANKK1Q8NFD2 765 aa9.73□□□□□ -0.85
SEC23IP-206ENST00000475542 SLC24A3Q9HC58 644 aa9.72□□□□□ -0.85
SEC23IP-206ENST00000475542 SWT1Q5T5J6 900 aaKnown RBP9.71□□□□□ -0.86
SEC23IP-206ENST00000475542 DNAJB2P25686 324 aa9.7□□□□□ -0.86
SEC23IP-206ENST00000475542 HDGFP51858 240 aaKnown RBP9.7□□□□□ -0.86
SEC23IP-206ENST00000475542 PTPN5P54829 565 aa9.7□□□□□ -0.86
SEC23IP-206ENST00000475542 THSD4Q6ZMP0 1018 aa9.7□□□□□ -0.86
SEC23IP-206ENST00000475542 LRCH3Q96II8 777 aa9.7□□□□□ -0.86
SEC23IP-206ENST00000475542 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms