RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 EN1Q05925 392 aaPredicted RBP15.73■□□□□ 0.11
SMC5-203ENST00000475540 AXIN2Q9Y2T1 843 aa15.71■□□□□ 0.11
SMC5-203ENST00000475540 C6orf132Q5T0Z8 1188 aa15.7■□□□□ 0.1
SMC5-203ENST00000475540 BCANQ96GW7 911 aa15.7■□□□□ 0.1
SMC5-203ENST00000475540 KCNK17Q96T54 332 aa15.7■□□□□ 0.1
SMC5-203ENST00000475540 POTEEQ6S8J3 1075 aa15.69■□□□□ 0.1
SMC5-203ENST00000475540 PRIM1P49642 420 aaKnown RBP15.67■□□□□ 0.1
SMC5-203ENST00000475540 PSEN2P49810 448 aa15.67■□□□□ 0.1
SMC5-203ENST00000475540 TSR1Q2NL82 804 aaKnown RBP15.64■□□□□ 0.09
SMC5-203ENST00000475540 KRTAP3-3Q9BYR6 98 aa15.63■□□□□ 0.09
SMC5-203ENST00000475540 KRTAP3-2Q9BYR7 98 aa15.63■□□□□ 0.09
SMC5-203ENST00000475540 NUTM2FA1L443 756 aa15.61■□□□□ 0.09
SMC5-203ENST00000475540 RBM26Q5T8P6 1007 aaKnown RBP15.61■□□□□ 0.09
SMC5-203ENST00000475540 PPP1R3GB7ZBB8 358 aa15.6■□□□□ 0.09
SMC5-203ENST00000475540 LSM11P83369 360 aaKnown RBP eCLIP15.6■□□□□ 0.09
SMC5-203ENST00000475540 DMRTA1Q5VZB9 504 aa15.59■□□□□ 0.09
SMC5-203ENST00000475540 ANKRD13DQ6ZTN6 518 aa15.59■□□□□ 0.09
SMC5-203ENST00000475540 CERKQ8TCT0 537 aa15.59■□□□□ 0.09
SMC5-203ENST00000475540 COL9A1P20849 921 aa15.58■□□□□ 0.08
SMC5-203ENST00000475540 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.58■□□□□ 0.08
SMC5-203ENST00000475540 CDHR5Q9HBB8 845 aa15.56■□□□□ 0.08
SMC5-203ENST00000475540 ZBED2Q9BTP6 218 aa15.54■□□□□ 0.08
SMC5-203ENST00000475540 SLC4A5Q9BY07 1137 aa15.54■□□□□ 0.08
SMC5-203ENST00000475540 TK2O00142 265 aa15.53■□□□□ 0.08
SMC5-203ENST00000475540 LMOD2Q6P5Q4 547 aa15.51■□□□□ 0.07
SMC5-203ENST00000475540 NPDC1Q9NQX5 325 aaPredicted RBP15.51■□□□□ 0.07
SMC5-203ENST00000475540 FCHSD2O94868 740 aa15.5■□□□□ 0.07
SMC5-203ENST00000475540 PTGDRQ13258 359 aa15.5■□□□□ 0.07
SMC5-203ENST00000475540 ADGRD1Q6QNK2 874 aa15.5■□□□□ 0.07
SMC5-203ENST00000475540 GPIHBP1Q8IV16 184 aa15.5■□□□□ 0.07
SMC5-203ENST00000475540 VPS9D1Q9Y2B5 631 aa15.49■□□□□ 0.07
SMC5-203ENST00000475540 PRSS12P56730 875 aa15.48■□□□□ 0.07
SMC5-203ENST00000475540 ONECUT3O60422 494 aaPredicted RBP15.47■□□□□ 0.07
SMC5-203ENST00000475540 PROX2Q3B8N5 592 aa15.47■□□□□ 0.07
SMC5-203ENST00000475540 CDCA7LQ96GN5 454 aa15.47■□□□□ 0.07
SMC5-203ENST00000475540 TRIM6-TRIM34B2RNG4 842 aa15.45■□□□□ 0.06
SMC5-203ENST00000475540 STAC3Q96MF2 364 aa15.45■□□□□ 0.06
SMC5-203ENST00000475540 HIC1Q14526 733 aa15.43■□□□□ 0.06
SMC5-203ENST00000475540 PACS2Q86VP3 889 aa15.43■□□□□ 0.06
SMC5-203ENST00000475540 RBM27Q9P2N5 1060 aaKnown RBP15.43■□□□□ 0.06
SMC5-203ENST00000475540 KIAA1468Q9P260 1216 aa15.42■□□□□ 0.06
SMC5-203ENST00000475540 RABGEF1Q9UJ41 708 aa15.42■□□□□ 0.06
SMC5-203ENST00000475540 MMRN1Q13201 1228 aa15.4■□□□□ 0.06
SMC5-203ENST00000475540 SPNS2Q8IVW8 549 aa15.4■□□□□ 0.06
SMC5-203ENST00000475540 TSKSQ9UJT2 592 aa15.4■□□□□ 0.06
SMC5-203ENST00000475540 HRO43593 1189 aa15.39■□□□□ 0.05
SMC5-203ENST00000475540 PADI6Q6TGC4 694 aa15.39■□□□□ 0.05
SMC5-203ENST00000475540 GNPATO15228 680 aa15.38■□□□□ 0.05
SMC5-203ENST00000475540 NBPF3Q9H094 633 aa15.38■□□□□ 0.05
SMC5-203ENST00000475540 BHMG1C9JSJ3 638 aaPredicted RBP15.36■□□□□ 0.05
SMC5-203ENST00000475540 GPR37O15354 613 aa15.36■□□□□ 0.05
SMC5-203ENST00000475540 TTC13Q8NBP0 860 aa15.35■□□□□ 0.05
SMC5-203ENST00000475540 FAM198AQ9UFP1 575 aa15.35■□□□□ 0.05
SMC5-203ENST00000475540 MRPL50Q8N5N7 158 aaKnown RBP15.34■□□□□ 0.05
SMC5-203ENST00000475540 NBPF26B4DH59 902 aa15.32■□□□□ 0.04
SMC5-203ENST00000475540 ZC3H15Q8WU90 426 aaKnown RBP15.32■□□□□ 0.04
SMC5-203ENST00000475540 TATDN2Q93075 761 aa15.31■□□□□ 0.04
SMC5-203ENST00000475540 PNMA3Q9UL41 463 aa15.31■□□□□ 0.04
SMC5-203ENST00000475540 FECHP22830 423 aa15.3■□□□□ 0.04
SMC5-203ENST00000475540 GOLGA8CPA6NN73 597 aa15.29■□□□□ 0.04
SMC5-203ENST00000475540 NUDT18Q6ZVK8 323 aa15.29■□□□□ 0.04
SMC5-203ENST00000475540 LAPTM4BQ86VI4 370 aa15.29■□□□□ 0.04
SMC5-203ENST00000475540 SEPT9Q9UHD8 586 aaPredicted RBP15.28■□□□□ 0.04
SMC5-203ENST00000475540 MYT1LQ9UL68 1186 aa15.28■□□□□ 0.04
SMC5-203ENST00000475540 SMAPO00193 183 aa15.26■□□□□ 0.03
SMC5-203ENST00000475540 ZMYND10O75800 440 aa15.25■□□□□ 0.03
SMC5-203ENST00000475540 FAM98CQ17RN3 349 aaKnown RBP15.25■□□□□ 0.03
SMC5-203ENST00000475540 KRI1Q8N9T8 703 aaKnown RBP15.25■□□□□ 0.03
SMC5-203ENST00000475540 OATP04181 439 aa15.24■□□□□ 0.03
SMC5-203ENST00000475540 RBM46Q8TBY0 533 aaKnown RBP15.24■□□□□ 0.03
SMC5-203ENST00000475540 ADGRG1Q9Y653 693 aa15.24■□□□□ 0.03
SMC5-203ENST00000475540 C3orf80F5H4A9 247 aa15.23■□□□□ 0.03
SMC5-203ENST00000475540 FAM161AQ3B820 660 aa15.23■□□□□ 0.03
SMC5-203ENST00000475540 MINK1Q8N4C8 1332 aaPredicted RBP15.22■□□□□ 0.03
SMC5-203ENST00000475540 MAP2K5Q13163 448 aa15.22■□□□□ 0.03
SMC5-203ENST00000475540 BARGINQ6ZT62 677 aa15.22■□□□□ 0.03
SMC5-203ENST00000475540 EYA1Q99502 592 aa15.21■□□□□ 0.03
SMC5-203ENST00000475540 ZFRQ96KR1 1074 aaKnown RBP15.2■□□□□ 0.02
SMC5-203ENST00000475540 IRF6O14896 467 aa15.19■□□□□ 0.02
SMC5-203ENST00000475540 HDGFP51858 240 aaKnown RBP15.19■□□□□ 0.02
SMC5-203ENST00000475540 WNT2BQ93097 391 aa15.18■□□□□ 0.02
SMC5-203ENST00000475540 RNF166Q96A37 237 aaPredicted RBP15.17■□□□□ 0.02
SMC5-203ENST00000475540 ANKK1Q8NFD2 765 aa15.16■□□□□ 0.02
SMC5-203ENST00000475540 PXYLP1Q8TE99 480 aa15.16■□□□□ 0.02
SMC5-203ENST00000475540 KCTD12Q96CX2 325 aaKnown RBP15.16■□□□□ 0.02
SMC5-203ENST00000475540 METTL3Q86U44 580 aaKnown RBP15.15■□□□□ 0.02
SMC5-203ENST00000475540 DNAJB2P25686 324 aa15.13■□□□□ 0.01
SMC5-203ENST00000475540 RCCD1A6NED2 376 aa15.12■□□□□ 0.01
SMC5-203ENST00000475540 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.11■□□□□ 0.01
SMC5-203ENST00000475540 CCDC102AQ96A19 550 aa15.11■□□□□ 0.01
SMC5-203ENST00000475540 SAMD7Q7Z3H4 446 aa15.1■□□□□ 0.01
SMC5-203ENST00000475540 LRCH3Q96II8 777 aa15.1■□□□□ 0.01
SMC5-203ENST00000475540 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.09■□□□□ 0.01
SMC5-203ENST00000475540 SOWAHBA6NEL2 793 aa15.08■□□□□ 0
SMC5-203ENST00000475540 SLC4A3P48751 1232 aa15.07■□□□□ 0
SMC5-203ENST00000475540 THSD4Q6ZMP0 1018 aa15.07■□□□□ 0
SMC5-203ENST00000475540 SWT1Q5T5J6 900 aaKnown RBP15.06■□□□□ 0
SMC5-203ENST00000475540 AK7Q96M32 723 aa15.06■□□□□ 0
SMC5-203ENST00000475540 TMEM134Q9H6X4 195 aa15.06■□□□□ 0
SMC5-203ENST00000475540 BCAMP50895 628 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms