RNA–Protein interactions for RNA: ENST00000475427.2

PDE6C-202, Transcript of phosphodiesterase 6C, humanhuman

TSL 2

Gene PDE6C, Length 476 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-202ENST00000475427 VPS9D1Q9Y2B5 631 aa11.17□□□□□ -0.62
PDE6C-202ENST00000475427 KCNV2Q8TDN2 545 aa11.16□□□□□ -0.62
PDE6C-202ENST00000475427 SLC4A5Q9BY07 1137 aa11.16□□□□□ -0.62
PDE6C-202ENST00000475427 ARHGEF1Q92888 912 aaKnown RBP11.15□□□□□ -0.62
PDE6C-202ENST00000475427 ZBED2Q9BTP6 218 aa11.15□□□□□ -0.62
PDE6C-202ENST00000475427 NBR1Q14596 966 aa11.14□□□□□ -0.63
PDE6C-202ENST00000475427 RBM33Q96EV2 1170 aaKnown RBP11.14□□□□□ -0.63
PDE6C-202ENST00000475427 PPP1R3GB7ZBB8 358 aa11.13□□□□□ -0.63
PDE6C-202ENST00000475427 C6orf132Q5T0Z8 1188 aa11.13□□□□□ -0.63
PDE6C-202ENST00000475427 GRXCR2A6NFK2 248 aa11.12□□□□□ -0.63
PDE6C-202ENST00000475427 COL9A1P20849 921 aa11.12□□□□□ -0.63
PDE6C-202ENST00000475427 STAC3Q96MF2 364 aa11.11□□□□□ -0.63
PDE6C-202ENST00000475427 EN1Q05925 392 aaPredicted RBP11.1□□□□□ -0.63
PDE6C-202ENST00000475427 P3H3Q8IVL6 736 aa11.09□□□□□ -0.63
PDE6C-202ENST00000475427 BHMG1C9JSJ3 638 aaPredicted RBP11.08□□□□□ -0.64
PDE6C-202ENST00000475427 MAP3K7O43318 606 aa11.08□□□□□ -0.64
PDE6C-202ENST00000475427 PROX2Q3B8N5 592 aa11.07□□□□□ -0.64
PDE6C-202ENST00000475427 OSBPP22059 807 aa11.06□□□□□ -0.64
PDE6C-202ENST00000475427 PRIM1P49642 420 aaKnown RBP11.06□□□□□ -0.64
PDE6C-202ENST00000475427 TSR1Q2NL82 804 aaKnown RBP11.06□□□□□ -0.64
PDE6C-202ENST00000475427 KDM2AQ9Y2K7 1162 aa11.04□□□□□ -0.64
PDE6C-202ENST00000475427 RABGEF1Q9UJ41 708 aa11.03□□□□□ -0.64
PDE6C-202ENST00000475427 MLLT3P42568 568 aaPredicted RBP11.02□□□□□ -0.65
PDE6C-202ENST00000475427 MRPL50Q8N5N7 158 aaKnown RBP11.02□□□□□ -0.65
PDE6C-202ENST00000475427 NBPF3Q9H094 633 aa11.02□□□□□ -0.65
PDE6C-202ENST00000475427 ONECUT3O60422 494 aaPredicted RBP11.01□□□□□ -0.65
PDE6C-202ENST00000475427 KCTD12Q96CX2 325 aaKnown RBP11.01□□□□□ -0.65
PDE6C-202ENST00000475427 TRIM6-TRIM34B2RNG4 842 aa11□□□□□ -0.65
PDE6C-202ENST00000475427 KIAA1468Q9P260 1216 aa11□□□□□ -0.65
PDE6C-202ENST00000475427 VSIG10Q8N0Z9 540 aa10.99□□□□□ -0.65
PDE6C-202ENST00000475427 GOLGA8CPA6NN73 597 aa10.98□□□□□ -0.65
PDE6C-202ENST00000475427 CERKQ8TCT0 537 aa10.97□□□□□ -0.65
PDE6C-202ENST00000475427 CDHR5Q9HBB8 845 aa10.97□□□□□ -0.65
PDE6C-202ENST00000475427 HCSTQ9UBK5 93 aa10.97□□□□□ -0.65
PDE6C-202ENST00000475427 SEMA3EO15041 775 aa10.96□□□□□ -0.65
PDE6C-202ENST00000475427 CDCA7LQ96GN5 454 aa10.95□□□□□ -0.66
PDE6C-202ENST00000475427 TSKSQ9UJT2 592 aa10.95□□□□□ -0.66
PDE6C-202ENST00000475427 PRSS12P56730 875 aa10.94□□□□□ -0.66
PDE6C-202ENST00000475427 LAPTM4BQ86VI4 370 aa10.94□□□□□ -0.66
PDE6C-202ENST00000475427 WNT2BQ93097 391 aa10.94□□□□□ -0.66
PDE6C-202ENST00000475427 PACS2Q86VP3 889 aa10.93□□□□□ -0.66
PDE6C-202ENST00000475427 NPDC1Q9NQX5 325 aaPredicted RBP10.92□□□□□ -0.66
PDE6C-202ENST00000475427 SEPT9Q9UHD8 586 aaPredicted RBP10.92□□□□□ -0.66
PDE6C-202ENST00000475427 THSD4Q6ZMP0 1018 aa10.91□□□□□ -0.66
PDE6C-202ENST00000475427 FAM198AQ9UFP1 575 aa10.91□□□□□ -0.66
PDE6C-202ENST00000475427 PTPN5P54829 565 aa10.9□□□□□ -0.66
PDE6C-202ENST00000475427 ZFRQ96KR1 1074 aaKnown RBP10.89□□□□□ -0.67
PDE6C-202ENST00000475427 TESPA1A2RU30 521 aaPredicted RBP10.88□□□□□ -0.67
PDE6C-202ENST00000475427 FAM98CQ17RN3 349 aaKnown RBP10.88□□□□□ -0.67
PDE6C-202ENST00000475427 ANKK1Q8NFD2 765 aa10.88□□□□□ -0.67
PDE6C-202ENST00000475427 RBM27Q9P2N5 1060 aaKnown RBP10.88□□□□□ -0.67
PDE6C-202ENST00000475427 C3orf80F5H4A9 247 aa10.85□□□□□ -0.67
PDE6C-202ENST00000475427 SMAPO00193 183 aa10.85□□□□□ -0.67
PDE6C-202ENST00000475427 PADI6Q6TGC4 694 aa10.85□□□□□ -0.67
PDE6C-202ENST00000475427 TATDN2Q93075 761 aa10.85□□□□□ -0.67
PDE6C-202ENST00000475427 NUTM2FA1L443 756 aa10.84□□□□□ -0.67
PDE6C-202ENST00000475427 NBPF26B4DH59 902 aa10.84□□□□□ -0.67
PDE6C-202ENST00000475427 PTGDRQ13258 359 aa10.84□□□□□ -0.67
PDE6C-202ENST00000475427 SMYD5Q6GMV2 418 aa10.84□□□□□ -0.67
PDE6C-202ENST00000475427 TTC13Q8NBP0 860 aa10.84□□□□□ -0.67
PDE6C-202ENST00000475427 PNMA3Q9UL41 463 aa10.84□□□□□ -0.67
PDE6C-202ENST00000475427 SOWAHBA6NEL2 793 aa10.83□□□□□ -0.68
PDE6C-202ENST00000475427 BCAMP50895 628 aa10.83□□□□□ -0.68
PDE6C-202ENST00000475427 NUDT18Q6ZVK8 323 aa10.82□□□□□ -0.68
PDE6C-202ENST00000475427 RBM26Q5T8P6 1007 aaKnown RBP10.8□□□□□ -0.68
PDE6C-202ENST00000475427 LRCH3Q96II8 777 aa10.79□□□□□ -0.68
PDE6C-202ENST00000475427 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.79□□□□□ -0.68
PDE6C-202ENST00000475427 PLA2G2EQ9NZK7 142 aa10.79□□□□□ -0.68
PDE6C-202ENST00000475427 FCHSD2O94868 740 aa10.78□□□□□ -0.68
PDE6C-202ENST00000475427 SAMD7Q7Z3H4 446 aa10.76□□□□□ -0.69
PDE6C-202ENST00000475427 WBP1LQ9NX94 342 aa10.75□□□□□ -0.69
PDE6C-202ENST00000475427 TSR3Q9UJK0 312 aaKnown RBP10.75□□□□□ -0.69
PDE6C-202ENST00000475427 HPS5Q9UPZ3 1129 aa10.75□□□□□ -0.69
PDE6C-202ENST00000475427 EYA1Q99502 592 aa10.74□□□□□ -0.69
PDE6C-202ENST00000475427 HDGFP51858 240 aaKnown RBP10.73□□□□□ -0.69
PDE6C-202ENST00000475427 HIC1Q14526 733 aa10.72□□□□□ -0.69
PDE6C-202ENST00000475427 NYAP1Q6ZVC0 841 aa10.72□□□□□ -0.69
PDE6C-202ENST00000475427 PPP4CP60510 307 aa10.71□□□□□ -0.69
PDE6C-202ENST00000475427 ADGRG1Q9Y653 693 aa10.71□□□□□ -0.69
PDE6C-202ENST00000475427 FAM161AQ3B820 660 aa10.69□□□□□ -0.7
PDE6C-202ENST00000475427 RBM46Q8TBY0 533 aaKnown RBP10.69□□□□□ -0.7
PDE6C-202ENST00000475427 GNPATO15228 680 aa10.68□□□□□ -0.7
PDE6C-202ENST00000475427 GPR37O15354 613 aa10.68□□□□□ -0.7
PDE6C-202ENST00000475427 SWT1Q5T5J6 900 aaKnown RBP10.68□□□□□ -0.7
PDE6C-202ENST00000475427 TULP1O00294 542 aaPredicted RBP10.67□□□□□ -0.7
PDE6C-202ENST00000475427 RNF40O75150 1001 aa10.66□□□□□ -0.7
PDE6C-202ENST00000475427 FECHP22830 423 aa10.66□□□□□ -0.7
PDE6C-202ENST00000475427 GPIHBP1Q8IV16 184 aa10.66□□□□□ -0.7
PDE6C-202ENST00000475427 DNAJB2P25686 324 aa10.65□□□□□ -0.7
PDE6C-202ENST00000475427 IFFO2Q5TF58 517 aa10.65□□□□□ -0.7
PDE6C-202ENST00000475427 OATP04181 439 aa10.64□□□□□ -0.71
PDE6C-202ENST00000475427 SLF2Q8IX21 1173 aa10.64□□□□□ -0.71
PDE6C-202ENST00000475427 RCCD1A6NED2 376 aa10.63□□□□□ -0.71
PDE6C-202ENST00000475427 ITGBL1O95965 494 aaPredicted RBP10.63□□□□□ -0.71
PDE6C-202ENST00000475427 PXYLP1Q8TE99 480 aa10.62□□□□□ -0.71
PDE6C-202ENST00000475427 TMEM134Q9H6X4 195 aa10.62□□□□□ -0.71
PDE6C-202ENST00000475427 SLC4A3P48751 1232 aa10.61□□□□□ -0.71
PDE6C-202ENST00000475427 NECTIN2Q92692 538 aa10.61□□□□□ -0.71
PDE6C-202ENST00000475427 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.6□□□□□ -0.71
PDE6C-202ENST00000475427 METTL3Q86U44 580 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms