RNA–Protein interactions for RNA: ENST00000475352.1

KCNMA1-218, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 3

Gene KCNMA1, Length 709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-218ENST00000475352 NACADO15069 1562 aa13.35□□□□□ -0.27
KCNMA1-218ENST00000475352 MINK1Q8N4C8 1332 aaPredicted RBP13.35□□□□□ -0.27
KCNMA1-218ENST00000475352 PSDA5PKW4 1024 aaPredicted RBP13.34□□□□□ -0.27
KCNMA1-218ENST00000475352 ZDHHC16Q969W1 377 aa13.34□□□□□ -0.27
KCNMA1-218ENST00000475352 ZNF454Q8N9F8 522 aa13.33□□□□□ -0.28
KCNMA1-218ENST00000475352 NPDC1Q9NQX5 325 aaPredicted RBP13.33□□□□□ -0.28
KCNMA1-218ENST00000475352 BRPF1P55201 1214 aaPredicted RBP13.32□□□□□ -0.28
KCNMA1-218ENST00000475352 CDHR5Q9HBB8 845 aa13.32□□□□□ -0.28
KCNMA1-218ENST00000475352 RBM33Q96EV2 1170 aaKnown RBP13.31□□□□□ -0.28
KCNMA1-218ENST00000475352 LHX6Q9UPM6 363 aa13.31□□□□□ -0.28
KCNMA1-218ENST00000475352 TSR1Q2NL82 804 aaKnown RBP13.3□□□□□ -0.28
KCNMA1-218ENST00000475352 CERKQ8TCT0 537 aa13.3□□□□□ -0.28
KCNMA1-218ENST00000475352 IRF6O14896 467 aa13.28□□□□□ -0.28
KCNMA1-218ENST00000475352 C6orf132Q5T0Z8 1188 aa13.28□□□□□ -0.28
KCNMA1-218ENST00000475352 RB1CC1Q8TDY2 1594 aa13.28□□□□□ -0.28
KCNMA1-218ENST00000475352 TRIM66O15016 1216 aa13.27□□□□□ -0.29
KCNMA1-218ENST00000475352 PPP4R3BQ5MIZ7 849 aa13.27□□□□□ -0.29
KCNMA1-218ENST00000475352 ADAM33Q9BZ11 813 aa13.27□□□□□ -0.29
KCNMA1-218ENST00000475352 FECHP22830 423 aa13.26□□□□□ -0.29
KCNMA1-218ENST00000475352 CCDC102AQ96A19 550 aa13.26□□□□□ -0.29
KCNMA1-218ENST00000475352 NEUROD2Q15784 382 aa13.25□□□□□ -0.29
KCNMA1-218ENST00000475352 RBM27Q9P2N5 1060 aaKnown RBP13.24□□□□□ -0.29
KCNMA1-218ENST00000475352 BCL2L12Q9HB09 334 aa13.23□□□□□ -0.29
KCNMA1-218ENST00000475352 TMEM132AQ24JP5 1023 aa13.22□□□□□ -0.29
KCNMA1-218ENST00000475352 PDE4DQ08499 809 aa13.21□□□□□ -0.29
KCNMA1-218ENST00000475352 AMHR2Q16671 573 aa13.21□□□□□ -0.29
KCNMA1-218ENST00000475352 TTC13Q8NBP0 860 aa13.18□□□□□ -0.3
KCNMA1-218ENST00000475352 PTPREP23469 700 aa13.15□□□□□ -0.3
KCNMA1-218ENST00000475352 PPP1R3GB7ZBB8 358 aa13.14□□□□□ -0.31
KCNMA1-218ENST00000475352 PRSS12P56730 875 aa13.14□□□□□ -0.31
KCNMA1-218ENST00000475352 PADI6Q6TGC4 694 aa13.14□□□□□ -0.31
KCNMA1-218ENST00000475352 ST18O60284 1047 aa13.12□□□□□ -0.31
KCNMA1-218ENST00000475352 KDM4CQ9H3R0 1056 aa13.12□□□□□ -0.31
KCNMA1-218ENST00000475352 GPBP1L1Q9HC44 474 aaPredicted RBP13.12□□□□□ -0.31
KCNMA1-218ENST00000475352 DAXXQ9UER7 740 aaPredicted RBP13.12□□□□□ -0.31
KCNMA1-218ENST00000475352 COL9A1P20849 921 aa13.11□□□□□ -0.31
KCNMA1-218ENST00000475352 CDCA7LQ96GN5 454 aa13.11□□□□□ -0.31
KCNMA1-218ENST00000475352 OATP04181 439 aa13.1□□□□□ -0.31
KCNMA1-218ENST00000475352 PARP9Q8IXQ6 854 aa13.09□□□□□ -0.31
KCNMA1-218ENST00000475352 ADGRG1Q9Y653 693 aa13.09□□□□□ -0.31
KCNMA1-218ENST00000475352 METTL3Q86U44 580 aaKnown RBP13.07□□□□□ -0.32
KCNMA1-218ENST00000475352 SHROOM4Q9ULL8 1493 aa13.07□□□□□ -0.32
KCNMA1-218ENST00000475352 ERBB3P21860 1342 aa13.07□□□□□ -0.32
KCNMA1-218ENST00000475352 ONECUT3O60422 494 aaPredicted RBP13.06□□□□□ -0.32
KCNMA1-218ENST00000475352 PXYLP1Q8TE99 480 aa13.06□□□□□ -0.32
KCNMA1-218ENST00000475352 TMUB1Q9BVT8 246 aa13.06□□□□□ -0.32
KCNMA1-218ENST00000475352 KCNH8Q96L42 1107 aa13.05□□□□□ -0.32
KCNMA1-218ENST00000475352 VARS2Q5ST30 1063 aaKnown RBP13.04□□□□□ -0.32
KCNMA1-218ENST00000475352 PHOX2BQ99453 314 aa13.04□□□□□ -0.32
KCNMA1-218ENST00000475352 FAM198AQ9UFP1 575 aa13.04□□□□□ -0.32
KCNMA1-218ENST00000475352 SCRIBQ14160 1630 aa13.03□□□□□ -0.32
KCNMA1-218ENST00000475352 TRIM6-TRIM34B2RNG4 842 aa13.03□□□□□ -0.32
KCNMA1-218ENST00000475352 CLCN1P35523 988 aa13.03□□□□□ -0.32
KCNMA1-218ENST00000475352 EMP3P54852 163 aa13.03□□□□□ -0.32
KCNMA1-218ENST00000475352 KCNK17Q96T54 332 aa13.03□□□□□ -0.32
KCNMA1-218ENST00000475352 PBX2P40425 430 aa13.02□□□□□ -0.33
KCNMA1-218ENST00000475352 TTLL12Q14166 644 aaPredicted RBP13.02□□□□□ -0.33
KCNMA1-218ENST00000475352 RBM46Q8TBY0 533 aaKnown RBP13.02□□□□□ -0.33
KCNMA1-218ENST00000475352 TSKSQ9UJT2 592 aa13.02□□□□□ -0.33
KCNMA1-218ENST00000475352 POTEMA6NI47 508 aa13.01□□□□□ -0.33
KCNMA1-218ENST00000475352 GPCPD1Q9NPB8 672 aa13.01□□□□□ -0.33
KCNMA1-218ENST00000475352 ARHGAP33O14559 1287 aa13□□□□□ -0.33
KCNMA1-218ENST00000475352 FAM161AQ3B820 660 aa13□□□□□ -0.33
KCNMA1-218ENST00000475352 GIGYF2Q6Y7W6 1299 aaKnown RBP13□□□□□ -0.33
KCNMA1-218ENST00000475352 SLC4A5Q9BY07 1137 aa13□□□□□ -0.33
KCNMA1-218ENST00000475352 ZNF687Q8N1G0 1237 aa12.99□□□□□ -0.33
KCNMA1-218ENST00000475352 DDRGK1Q96HY6 314 aa12.99□□□□□ -0.33
KCNMA1-218ENST00000475352 EYA1Q99502 592 aa12.99□□□□□ -0.33
KCNMA1-218ENST00000475352 ZBED2Q9BTP6 218 aa12.99□□□□□ -0.33
KCNMA1-218ENST00000475352 NBPF26B4DH59 902 aa12.98□□□□□ -0.33
KCNMA1-218ENST00000475352 POTEEQ6S8J3 1075 aa12.98□□□□□ -0.33
KCNMA1-218ENST00000475352 PACS2Q86VP3 889 aa12.98□□□□□ -0.33
KCNMA1-218ENST00000475352 REPIN1Q9BWE0 567 aaKnown RBP12.98□□□□□ -0.33
KCNMA1-218ENST00000475352 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.97□□□□□ -0.33
KCNMA1-218ENST00000475352 MDM2Q00987 491 aaPredicted RBP12.97□□□□□ -0.33
KCNMA1-218ENST00000475352 MARVELD3Q96A59 401 aa12.97□□□□□ -0.33
KCNMA1-218ENST00000475352 FAM163AQ96GL9 167 aaPredicted RBP12.96□□□□□ -0.33
KCNMA1-218ENST00000475352 FAM117AQ9C073 453 aa12.96□□□□□ -0.33
KCNMA1-218ENST00000475352 PSEN2P49810 448 aa12.95□□□□□ -0.34
KCNMA1-218ENST00000475352 FAM205CA6NFA0 338 aa12.94□□□□□ -0.34
KCNMA1-218ENST00000475352 PROX2Q3B8N5 592 aa12.94□□□□□ -0.34
KCNMA1-218ENST00000475352 LCE2DQ5TA82 110 aaPredicted RBP12.94□□□□□ -0.34
KCNMA1-218ENST00000475352 POTEGQ6S5H5 508 aa12.94□□□□□ -0.34
KCNMA1-218ENST00000475352 TATDN2Q93075 761 aa12.94□□□□□ -0.34
KCNMA1-218ENST00000475352 MS4A1P11836 297 aa12.93□□□□□ -0.34
KCNMA1-218ENST00000475352 NUDT18Q6ZVK8 323 aa12.93□□□□□ -0.34
KCNMA1-218ENST00000475352 IL27Q8NEV9 243 aa12.93□□□□□ -0.34
KCNMA1-218ENST00000475352 PLEKHG3A1L390 1219 aa12.92□□□□□ -0.34
KCNMA1-218ENST00000475352 C3orf80F5H4A9 247 aa12.92□□□□□ -0.34
KCNMA1-218ENST00000475352 HS3ST6Q96QI5 342 aa12.92□□□□□ -0.34
KCNMA1-218ENST00000475352 FAM217BQ9NTX9 383 aaPredicted RBP12.92□□□□□ -0.34
KCNMA1-218ENST00000475352 PNMA3Q9UL41 463 aa12.92□□□□□ -0.34
KCNMA1-218ENST00000475352 RCCD1A6NED2 376 aa12.91□□□□□ -0.34
KCNMA1-218ENST00000475352 RABGEF1Q9UJ41 708 aa12.91□□□□□ -0.34
KCNMA1-218ENST00000475352 GTF3C3Q9Y5Q9 886 aa12.91□□□□□ -0.34
KCNMA1-218ENST00000475352 DNAJB2P25686 324 aa12.9□□□□□ -0.34
KCNMA1-218ENST00000475352 SSTR3P32745 418 aaPredicted RBP12.89□□□□□ -0.35
KCNMA1-218ENST00000475352 DMRTA1Q5VZB9 504 aa12.89□□□□□ -0.35
KCNMA1-218ENST00000475352 KIAA1468Q9P260 1216 aa12.89□□□□□ -0.35
KCNMA1-218ENST00000475352 POTEB3A0JP26 581 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms