RNA–Protein interactions for RNA: ENST00000475302.1

ITGA6-210, Transcript of integrin subunit alpha 6, humanhuman

TSL 3

Gene ITGA6, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-210ENST00000475302 GABBR2O75899 941 aa14.34□□□□□ -0.11
ITGA6-210ENST00000475302 IFNLR1Q8IU57 520 aaPredicted RBP14.34□□□□□ -0.11
ITGA6-210ENST00000475302 KLHL34Q8N239 644 aa14.34□□□□□ -0.11
ITGA6-210ENST00000475302 CROCC2H7BZ55 1655 aa14.33□□□□□ -0.11
ITGA6-210ENST00000475302 ARAP3Q8WWN8 1544 aa14.33□□□□□ -0.12
ITGA6-210ENST00000475302 PHF12Q96QT6 1004 aa14.33□□□□□ -0.12
ITGA6-210ENST00000475302 KDM6BO15054 1643 aa14.32□□□□□ -0.12
ITGA6-210ENST00000475302 NCOA1Q15788 1441 aa14.32□□□□□ -0.12
ITGA6-210ENST00000475302 SHANK2Q9UPX8 1470 aa14.31□□□□□ -0.12
ITGA6-210ENST00000475302 MYO5CQ9NQX4 1742 aa14.31□□□□□ -0.12
ITGA6-210ENST00000475302 ASXL2Q76L83 1435 aa14.31□□□□□ -0.12
ITGA6-210ENST00000475302 KIAA1107Q9UPP5 1409 aa14.31□□□□□ -0.12
ITGA6-210ENST00000475302 ABCA9Q8IUA7 1624 aa14.3□□□□□ -0.12
ITGA6-210ENST00000475302 RRP7BPQ9NSQ0 103 aa14.3□□□□□ -0.12
ITGA6-210ENST00000475302 CHIC2Q9UKJ5 165 aa14.3□□□□□ -0.12
ITGA6-210ENST00000475302 KCNH8Q96L42 1107 aa14.29□□□□□ -0.12
ITGA6-210ENST00000475302 RIMBP3CA6NJZ7 1639 aa14.29□□□□□ -0.12
ITGA6-210ENST00000475302 RIMBP3BA6NNM3 1639 aa14.29□□□□□ -0.12
ITGA6-210ENST00000475302 RIMBP3Q9UFD9 1639 aa14.29□□□□□ -0.12
ITGA6-210ENST00000475302 DENND4BO75064 1496 aaPredicted RBP14.28□□□□□ -0.12
ITGA6-210ENST00000475302 ADGBQ8N7X0 1667 aa14.28□□□□□ -0.12
ITGA6-210ENST00000475302 ARHGEF12Q9NZN5 1544 aa14.28□□□□□ -0.12
ITGA6-210ENST00000475302 ZNF777Q9ULD5 760 aaPredicted RBP14.28□□□□□ -0.12
ITGA6-210ENST00000475302 RSPH4AQ5TD94 716 aa14.27□□□□□ -0.13
ITGA6-210ENST00000475302 MAST1Q9Y2H9 1570 aa14.26□□□□□ -0.13
ITGA6-210ENST00000475302 ARHGAP5Q13017 1502 aa14.26□□□□□ -0.13
ITGA6-210ENST00000475302 CCDC61Q9Y6R9 512 aa14.26□□□□□ -0.13
ITGA6-210ENST00000475302 PLEKHH2Q8IVE3 1493 aa14.25□□□□□ -0.13
ITGA6-210ENST00000475302 HNRNPMP52272 730 aaKnown RBP eCLIP14.25□□□□□ -0.13
ITGA6-210ENST00000475302 CCDC141Q6ZP82 1450 aa14.25□□□□□ -0.13
ITGA6-210ENST00000475302 C9orf84Q5VXU9 1444 aa14.24□□□□□ -0.13
ITGA6-210ENST00000475302 ABCC1P33527 1531 aa14.24□□□□□ -0.13
ITGA6-210ENST00000475302 SYCP2Q9BX26 1530 aa14.24□□□□□ -0.13
ITGA6-210ENST00000475302 ACIN1Q9UKV3 1341 aaKnown RBP14.23□□□□□ -0.13
ITGA6-210ENST00000475302 EFCAB2Q5VUJ9 269 aa14.23□□□□□ -0.13
ITGA6-210ENST00000475302 ANKRD30AQ9BXX3 1397 aa14.22□□□□□ -0.13
ITGA6-210ENST00000475302 GALR2O43603 387 aaPredicted RBP14.19□□□□□ -0.14
ITGA6-210ENST00000475302 FAM212AQ96EL1 285 aa14.19□□□□□ -0.14
ITGA6-210ENST00000475302 TRAPPC8Q9Y2L5 1435 aa14.18□□□□□ -0.14
ITGA6-210ENST00000475302 TSPY4P0CV99 314 aa14.18□□□□□ -0.14
ITGA6-210ENST00000475302 TSPY10P0CW01 314 aa14.18□□□□□ -0.14
ITGA6-210ENST00000475302 CYB5RLQ6IPT4 315 aa14.18□□□□□ -0.14
ITGA6-210ENST00000475302 ANKRD50Q9ULJ7 1429 aa14.17□□□□□ -0.14
ITGA6-210ENST00000475302 PZPP20742 1482 aa14.17□□□□□ -0.14
ITGA6-210ENST00000475302 PLXNC1O60486 1568 aa14.17□□□□□ -0.14
ITGA6-210ENST00000475302 DCAF8Q5TAQ9 597 aa14.16□□□□□ -0.14
ITGA6-210ENST00000475302 SPOCK2Q92563 424 aa14.16□□□□□ -0.14
ITGA6-210ENST00000475302 FANCAO15360 1455 aa14.16□□□□□ -0.14
ITGA6-210ENST00000475302 GLI2P10070 1586 aa14.15□□□□□ -0.14
ITGA6-210ENST00000475302 SIN3AQ96ST3 1273 aa14.15□□□□□ -0.14
ITGA6-210ENST00000475302 MPHOSPH9Q99550 1183 aa14.15□□□□□ -0.14
ITGA6-210ENST00000475302 TIMELESSQ9UNS1 1208 aa14.15□□□□□ -0.14
ITGA6-210ENST00000475302 KDM5DQ9BY66 1539 aa14.15□□□□□ -0.14
ITGA6-210ENST00000475302 KIF15Q9NS87 1388 aa14.14□□□□□ -0.15
ITGA6-210ENST00000475302 CLCN6P51797 869 aa14.14□□□□□ -0.15
ITGA6-210ENST00000475302 KIF12Q96FN5 646 aa14.14□□□□□ -0.15
ITGA6-210ENST00000475302 RTEL1-TNFRSF6BF6WH68 1400 aa14.14□□□□□ -0.15
ITGA6-210ENST00000475302 MS4A3Q96HJ5 214 aa14.13□□□□□ -0.15
ITGA6-210ENST00000475302 CD109Q6YHK3 1445 aa14.13□□□□□ -0.15
ITGA6-210ENST00000475302 MAP3K4Q9Y6R4 1608 aa14.12□□□□□ -0.15
ITGA6-210ENST00000475302 ZFYVE16Q7Z3T8 1539 aa14.1□□□□□ -0.15
ITGA6-210ENST00000475302 ANKRD30BQ9BXX2 1392 aa14.1□□□□□ -0.15
ITGA6-210ENST00000475302 INO80Q9ULG1 1556 aaPredicted RBP14.1□□□□□ -0.15
ITGA6-210ENST00000475302 SCAPERQ9BY12 1400 aa14.1□□□□□ -0.15
ITGA6-210ENST00000475302 MAP3K13O43283 966 aa14.1□□□□□ -0.15
ITGA6-210ENST00000475302 AFAP1Q8N556 730 aa14.1□□□□□ -0.15
ITGA6-210ENST00000475302 DUOX2Q9NRD8 1548 aa14.1□□□□□ -0.15
ITGA6-210ENST00000475302 POTEIP0CG38 1075 aa14.09□□□□□ -0.15
ITGA6-210ENST00000475302 TRIM52Q96A61 297 aa14.09□□□□□ -0.15
ITGA6-210ENST00000475302 ADGRL1O94910 1474 aa14.09□□□□□ -0.15
ITGA6-210ENST00000475302 NEO1Q92859 1461 aa14.08□□□□□ -0.16
ITGA6-210ENST00000475302 UNC13BO14795 1591 aa14.08□□□□□ -0.16
ITGA6-210ENST00000475302 MAGI2Q86UL8 1455 aa14.07□□□□□ -0.16
ITGA6-210ENST00000475302 ERBINQ96RT1 1412 aa14.07□□□□□ -0.16
ITGA6-210ENST00000475302 CFAP74Q9C0B2 1584 aa14.06□□□□□ -0.16
ITGA6-210ENST00000475302 DIP2BQ9P265 1576 aa14.06□□□□□ -0.16
ITGA6-210ENST00000475302 KDM5CP41229 1560 aa14.05□□□□□ -0.16
ITGA6-210ENST00000475302 PPP1R15AO75807 674 aaPredicted RBP14.05□□□□□ -0.16
ITGA6-210ENST00000475302 PYGBP11216 843 aa14.05□□□□□ -0.16
ITGA6-210ENST00000475302 SPAG9O60271 1321 aaKnown RBP14.05□□□□□ -0.16
ITGA6-210ENST00000475302 ATP7AQ04656 1500 aa14.05□□□□□ -0.16
ITGA6-210ENST00000475302 GSE1Q14687 1217 aa14.04□□□□□ -0.16
ITGA6-210ENST00000475302 NUP155O75694 1391 aa14.04□□□□□ -0.16
ITGA6-210ENST00000475302 POGZQ7Z3K3 1410 aa14.04□□□□□ -0.16
ITGA6-210ENST00000475302 NEUROD1Q13562 356 aa14.03□□□□□ -0.16
ITGA6-210ENST00000475302 CIZ1Q9ULV3 898 aaPredicted RBP14.03□□□□□ -0.16
ITGA6-210ENST00000475302 MLH3Q9UHC1 1453 aa14.03□□□□□ -0.16
ITGA6-210ENST00000475302 KIDINS220Q9ULH0 1771 aa14.03□□□□□ -0.16
ITGA6-210ENST00000475302 RPRD2Q5VT52 1461 aaKnown RBP14.02□□□□□ -0.16
ITGA6-210ENST00000475302 ZNF518AQ6AHZ1 1483 aa14.02□□□□□ -0.16
ITGA6-210ENST00000475302 DCBLD2Q96PD2 775 aa14.02□□□□□ -0.17
ITGA6-210ENST00000475302 IQGAP3Q86VI3 1631 aa14.01□□□□□ -0.17
ITGA6-210ENST00000475302 FAM135AQ9P2D6 1515 aa14.01□□□□□ -0.17
ITGA6-210ENST00000475302 TRPC6Q9Y210 931 aa14.01□□□□□ -0.17
ITGA6-210ENST00000475302 PPRC1Q5VV67 1664 aaKnown RBP14.01□□□□□ -0.17
ITGA6-210ENST00000475302 ZNF316A6NFI3 1004 aaPredicted RBP14□□□□□ -0.17
ITGA6-210ENST00000475302 PCDHB13Q9Y5F0 798 aa14□□□□□ -0.17
ITGA6-210ENST00000475302 DEPDC5O75140 1603 aa14□□□□□ -0.17
ITGA6-210ENST00000475302 DHX29Q7Z478 1369 aaKnown RBP13.99□□□□□ -0.17
ITGA6-210ENST00000475302 PKD2Q13563 968 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms