RNA–Protein interactions for RNA: ENST00000474766.1

SH3D21-202, Transcript of SH3 domain containing 21, humanhuman

TSL 1 (best)

Gene SH3D21, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-202ENST00000474766 ADGBQ8N7X0 1667 aa29.76■■■□□ 2.35
SH3D21-202ENST00000474766 BCORL1Q5H9F3 1711 aa29.76■■■□□ 2.35
SH3D21-202ENST00000474766 RRP7BPQ9NSQ0 103 aa29.76■■■□□ 2.35
SH3D21-202ENST00000474766 ARID4BQ4LE39 1312 aaPredicted RBP29.75■■■□□ 2.35
SH3D21-202ENST00000474766 CHIC2Q9UKJ5 165 aa29.73■■■□□ 2.35
SH3D21-202ENST00000474766 TSPY4P0CV99 314 aa29.72■■■□□ 2.35
SH3D21-202ENST00000474766 TSPY10P0CW01 314 aa29.72■■■□□ 2.35
SH3D21-202ENST00000474766 BCL11AQ9H165 835 aa29.72■■■□□ 2.35
SH3D21-202ENST00000474766 PLXNC1O60486 1568 aa29.72■■■□□ 2.35
SH3D21-202ENST00000474766 SHANK2Q9UPX8 1470 aa29.71■■■□□ 2.35
SH3D21-202ENST00000474766 ADAMTSL3P82987 1691 aa29.7■■■□□ 2.34
SH3D21-202ENST00000474766 A2MP01023 1474 aa29.69■■■□□ 2.34
SH3D21-202ENST00000474766 ROCK1Q13464 1354 aa29.68■■■□□ 2.34
SH3D21-202ENST00000474766 AGLP35573 1532 aa29.68■■■□□ 2.34
SH3D21-202ENST00000474766 DDX10Q13206 875 aaKnown RBP29.66■■■□□ 2.34
SH3D21-202ENST00000474766 MADDQ8WXG6 1647 aa29.64■■■□□ 2.33
SH3D21-202ENST00000474766 MLECQ14165 292 aa29.62■■■□□ 2.33
SH3D21-202ENST00000474766 FKBP8Q14318 412 aa29.62■■■□□ 2.33
SH3D21-202ENST00000474766 DHX29Q7Z478 1369 aaKnown RBP29.6■■■□□ 2.33
SH3D21-202ENST00000474766 ADGRL2O95490 1459 aa29.59■■■□□ 2.33
SH3D21-202ENST00000474766 NCOA1Q15788 1441 aa29.58■■■□□ 2.33
SH3D21-202ENST00000474766 FER1L4A9Z1Z3 1794 aa29.57■■■□□ 2.32
SH3D21-202ENST00000474766 TRIM52Q96A61 297 aa29.57■■■□□ 2.32
SH3D21-202ENST00000474766 PRKCSHP14314 528 aaPredicted RBP29.57■■■□□ 2.32
SH3D21-202ENST00000474766 MPHOSPH9Q99550 1183 aa29.57■■■□□ 2.32
SH3D21-202ENST00000474766 NEFLP07196 543 aa29.56■■■□□ 2.32
SH3D21-202ENST00000474766 CCER2I3L3R5 266 aa29.55■■■□□ 2.32
SH3D21-202ENST00000474766 RIMS1Q86UR5 1692 aaKnown RBP29.55■■■□□ 2.32
SH3D21-202ENST00000474766 HIRIP3Q9BW71 556 aaPredicted RBP29.54■■■□□ 2.32
SH3D21-202ENST00000474766 KIF15Q9NS87 1388 aa29.54■■■□□ 2.32
SH3D21-202ENST00000474766 ANKRD30AQ9BXX3 1397 aa29.54■■■□□ 2.32
SH3D21-202ENST00000474766 DUOX2Q9NRD8 1548 aa29.53■■■□□ 2.32
SH3D21-202ENST00000474766 RBM19Q9Y4C8 960 aaKnown RBP29.52■■■□□ 2.32
SH3D21-202ENST00000474766 BCANQ96GW7 911 aa29.5■■■□□ 2.31
SH3D21-202ENST00000474766 EIF2AK4Q9P2K8 1649 aaKnown RBP29.48■■■□□ 2.31
SH3D21-202ENST00000474766 PTPRMP28827 1452 aa29.48■■■□□ 2.31
SH3D21-202ENST00000474766 KIF3BO15066 747 aa29.47■■■□□ 2.31
SH3D21-202ENST00000474766 GGT6Q6P531 493 aa29.44■■■□□ 2.3
SH3D21-202ENST00000474766 AEBP2Q6ZN18 517 aaPredicted RBP29.44■■■□□ 2.3
SH3D21-202ENST00000474766 RNF17Q9BXT8 1623 aaKnown RBP29.43■■■□□ 2.3
SH3D21-202ENST00000474766 ANKRD30BQ9BXX2 1392 aa29.43■■■□□ 2.3
SH3D21-202ENST00000474766 ERBINQ96RT1 1412 aa29.43■■■□□ 2.3
SH3D21-202ENST00000474766 MROH1Q8NDA8 1641 aa29.4■■■□□ 2.3
SH3D21-202ENST00000474766 CLTCQ00610 1675 aaKnown RBP29.4■■■□□ 2.3
SH3D21-202ENST00000474766 RPRD2Q5VT52 1461 aaKnown RBP29.38■■■□□ 2.29
SH3D21-202ENST00000474766 ANKRD50Q9ULJ7 1429 aa29.38■■■□□ 2.29
SH3D21-202ENST00000474766 ANP32CO43423 234 aa29.37■■■□□ 2.29
SH3D21-202ENST00000474766 C3P01024 1663 aa29.35■■■□□ 2.29
SH3D21-202ENST00000474766 L3MBTL2Q969R5 705 aa29.35■■■□□ 2.29
SH3D21-202ENST00000474766 MROH2AA6NES4 1674 aa29.35■■■□□ 2.29
SH3D21-202ENST00000474766 DEPDC5O75140 1603 aa29.34■■■□□ 2.29
SH3D21-202ENST00000474766 FOXD1Q16676 465 aa29.34■■■□□ 2.29
SH3D21-202ENST00000474766 CNTLNQ9NXG0 1405 aa29.34■■■□□ 2.29
SH3D21-202ENST00000474766 ERICH6Q7L0X2 663 aa29.33■■■□□ 2.29
SH3D21-202ENST00000474766 PLPPR3Q6T4P5 718 aa29.32■■■□□ 2.28
SH3D21-202ENST00000474766 ESF1Q9H501 851 aaKnown RBP29.32■■■□□ 2.28
SH3D21-202ENST00000474766 KDM5DQ9BY66 1539 aa29.32■■■□□ 2.28
SH3D21-202ENST00000474766 PRDM15P57071 1507 aaPredicted RBP29.31■■■□□ 2.28
SH3D21-202ENST00000474766 CEBPAP49715 358 aaPredicted RBP29.31■■■□□ 2.28
SH3D21-202ENST00000474766 PZPP20742 1482 aa29.31■■■□□ 2.28
SH3D21-202ENST00000474766 PPP6R1Q9UPN7 881 aa29.3■■■□□ 2.28
SH3D21-202ENST00000474766 HSPA5P11021 654 aaKnown RBP29.3■■■□□ 2.28
SH3D21-202ENST00000474766 SLC4A1APQ9BWU0 796 aaKnown RBP29.3■■■□□ 2.28
SH3D21-202ENST00000474766 FAM135AQ9P2D6 1515 aa29.29■■■□□ 2.28
SH3D21-202ENST00000474766 CEP152O94986 1710 aa29.28■■■□□ 2.28
SH3D21-202ENST00000474766 FANCIQ9NVI1 1328 aa29.28■■■□□ 2.28
SH3D21-202ENST00000474766 ABCC3O15438 1527 aa29.27■■■□□ 2.28
SH3D21-202ENST00000474766 ZC3H13Q5T200 1668 aaKnown RBP29.26■■■□□ 2.27
SH3D21-202ENST00000474766 EIF4G2P78344 907 aaKnown RBP eCLIP29.26■■■□□ 2.274e-9■□□□□ 11.1
SH3D21-202ENST00000474766 ZMYM3Q14202 1370 aa29.26■■■□□ 2.27
SH3D21-202ENST00000474766 WASHC2CQ9Y4E1 1318 aa29.25■■■□□ 2.27
SH3D21-202ENST00000474766 WASHC2AQ641Q2 1341 aa29.23■■■□□ 2.27
SH3D21-202ENST00000474766 VWDEQ8N2E2 1590 aa29.22■■■□□ 2.27
SH3D21-202ENST00000474766 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.21■■■□□ 2.271e-6■■□□□ 12.6
SH3D21-202ENST00000474766 UNC13BO14795 1591 aa29.21■■■□□ 2.27
SH3D21-202ENST00000474766 CAMSAP1Q5T5Y3 1602 aa29.19■■■□□ 2.26
SH3D21-202ENST00000474766 NBPF8Q3BBV2 869 aa29.17■■■□□ 2.26
SH3D21-202ENST00000474766 MSH5O43196 834 aa29.15■■■□□ 2.26
SH3D21-202ENST00000474766 KANK1Q14678 1352 aa29.14■■■□□ 2.26
SH3D21-202ENST00000474766 ERICH6BQ5W0A0 696 aa29.13■■■□□ 2.25
SH3D21-202ENST00000474766 LMTK2Q8IWU2 1503 aa29.13■■■□□ 2.25
SH3D21-202ENST00000474766 SETD1BQ9UPS6 1966 aaKnown RBP29.12■■■□□ 2.25
SH3D21-202ENST00000474766 PREX1Q8TCU6 1659 aa29.12■■■□□ 2.25
SH3D21-202ENST00000474766 NPATQ14207 1427 aa29.11■■■□□ 2.25
SH3D21-202ENST00000474766 SPATA31E1Q6ZUB1 1445 aa29.11■■■□□ 2.25
SH3D21-202ENST00000474766 NUP155O75694 1391 aa29.09■■■□□ 2.25
SH3D21-202ENST00000474766 CFAP65Q6ZU64 1925 aaKnown RBP29.09■■■□□ 2.25
SH3D21-202ENST00000474766 LMTK3Q96Q04 1460 aa29.09■■■□□ 2.25
SH3D21-202ENST00000474766 FBXO31Q5XUX0 539 aaPredicted RBP29.09■■■□□ 2.25
SH3D21-202ENST00000474766 IQGAP3Q86VI3 1631 aa29.09■■■□□ 2.25
SH3D21-202ENST00000474766 CCDC7Q96M83 1385 aa29.07■■■□□ 2.24
SH3D21-202ENST00000474766 EFCAB6Q5THR3 1501 aa29.07■■■□□ 2.24
SH3D21-202ENST00000474766 PKD2Q13563 968 aa29.06■■■□□ 2.24
SH3D21-202ENST00000474766 TET3O43151 1660 aa29.05■■■□□ 2.24
SH3D21-202ENST00000474766 ARHGAP31Q2M1Z3 1444 aa29.05■■■□□ 2.24
SH3D21-202ENST00000474766 C11orf95C9JLR9 678 aaPredicted RBP29.04■■■□□ 2.24
SH3D21-202ENST00000474766 MYO3AQ8NEV4 1616 aa29.04■■■□□ 2.24
SH3D21-202ENST00000474766 SPATA31D1Q6ZQQ2 1576 aa29.02■■■□□ 2.24
SH3D21-202ENST00000474766 ERVK-7P63135 1459 aa29.02■■■□□ 2.24
SH3D21-202ENST00000474766 UHRF1BP1Q6BDS2 1440 aa29.01■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms