RNA–Protein interactions for RNA: ENST00000474742.1

HDAC9-222, Transcript of histone deacetylase 9, human

TSL 3

Gene HDAC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC9-222	ENST00000474742	CRISPLD2	Q9H0B8	497 aa		3.02	□□□□□ -1.93
HDAC9-222	ENST00000474742	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	3.02	□□□□□ -1.93
HDAC9-222	ENST00000474742	KIAA1468	Q9P260	1216 aa		3.02	□□□□□ -1.93
HDAC9-222	ENST00000474742	SOWAHB	A6NEL2	793 aa		3.01	□□□□□ -1.93
HDAC9-222	ENST00000474742	ITGBL1	O95965	494 aa	Predicted RBP	3.01	□□□□□ -1.93
HDAC9-222	ENST00000474742	LRCH3	Q96II8	777 aa		3.01	□□□□□ -1.93
HDAC9-222	ENST00000474742	ZFR	Q96KR1	1074 aa	Known RBP	3.01	□□□□□ -1.93
HDAC9-222	ENST00000474742	ANO8	Q9HCE9	1232 aa	Predicted RBP	3.01	□□□□□ -1.93
HDAC9-222	ENST00000474742	WBP1L	Q9NX94	342 aa		3.01	□□□□□ -1.93
HDAC9-222	ENST00000474742	SEPT9	Q9UHD8	586 aa	Predicted RBP	3.01	□□□□□ -1.93
HDAC9-222	ENST00000474742	HPS5	Q9UPZ3	1129 aa		3.01	□□□□□ -1.93
HDAC9-222	ENST00000474742	COL9A1	P20849	921 aa		3	□□□□□ -1.93
HDAC9-222	ENST00000474742	PPP4C	P60510	307 aa		3	□□□□□ -1.93
HDAC9-222	ENST00000474742	RBM33	Q96EV2	1170 aa	Known RBP	3	□□□□□ -1.93
HDAC9-222	ENST00000474742	TSR3	Q9UJK0	312 aa	Known RBP	3	□□□□□ -1.93
HDAC9-222	ENST00000474742	NCKAP5L	Q9HCH0	1330 aa		2.99	□□□□□ -1.93
HDAC9-222	ENST00000474742	RNF40	O75150	1001 aa		2.99	□□□□□ -1.93
HDAC9-222	ENST00000474742	PHF14	O94880	888 aa		2.99	□□□□□ -1.93
HDAC9-222	ENST00000474742	FAM98C	Q17RN3	349 aa	Known RBP	2.99	□□□□□ -1.93
HDAC9-222	ENST00000474742	TRAF7	Q6Q0C0	670 aa		2.99	□□□□□ -1.93
HDAC9-222	ENST00000474742	PACS2	Q86VP3	889 aa		2.99	□□□□□ -1.93
HDAC9-222	ENST00000474742	EPAS1	Q99814	870 aa		2.99	□□□□□ -1.93
HDAC9-222	ENST00000474742	PCDHGA10	Q9Y5H3	936 aa		2.99	□□□□□ -1.93
HDAC9-222	ENST00000474742	HDGF	P51858	240 aa	Known RBP	2.98	□□□□□ -1.93
HDAC9-222	ENST00000474742	NKX1-1	Q15270	411 aa	Predicted RBP	2.98	□□□□□ -1.93
HDAC9-222	ENST00000474742	C6orf132	Q5T0Z8	1188 aa		2.98	□□□□□ -1.93
HDAC9-222	ENST00000474742	TRIM6-TRIM34	B2RNG4	842 aa		2.97	□□□□□ -1.93
HDAC9-222	ENST00000474742	MAP3K7	O43318	606 aa		2.97	□□□□□ -1.93
HDAC9-222	ENST00000474742	ONECUT3	O60422	494 aa	Predicted RBP	2.97	□□□□□ -1.93
HDAC9-222	ENST00000474742	DDX12P	Q92771	950 aa		2.97	□□□□□ -1.93
HDAC9-222	ENST00000474742	PRKD2	Q9BZL6	878 aa		2.97	□□□□□ -1.93
HDAC9-222	ENST00000474742	NRG2	O14511	850 aa	Predicted RBP	2.96	□□□□□ -1.94
HDAC9-222	ENST00000474742	DPYSL4	O14531	572 aa		2.96	□□□□□ -1.94
HDAC9-222	ENST00000474742	GGCX	P38435	758 aa		2.96	□□□□□ -1.94
HDAC9-222	ENST00000474742	AMER1	Q5JTC6	1135 aa	Predicted RBP	2.96	□□□□□ -1.94
HDAC9-222	ENST00000474742	ZNF787	Q6DD87	383 aa		2.96	□□□□□ -1.94
HDAC9-222	ENST00000474742	EMILIN3	Q9NT22	766 aa		2.96	□□□□□ -1.94
HDAC9-222	ENST00000474742	PDZRN3	Q9UPQ7	1066 aa		2.96	□□□□□ -1.94
HDAC9-222	ENST00000474742	SLC4A3	P48751	1232 aa		2.95	□□□□□ -1.94
HDAC9-222	ENST00000474742	NBR1	Q14596	966 aa		2.95	□□□□□ -1.94
HDAC9-222	ENST00000474742	MFSD10	Q14728	455 aa		2.95	□□□□□ -1.94
HDAC9-222	ENST00000474742	DNAJC5	Q9H3Z4	198 aa		2.95	□□□□□ -1.94
HDAC9-222	ENST00000474742	IL21	Q9HBE4	155 aa		2.95	□□□□□ -1.94
HDAC9-222	ENST00000474742	NBPF26	B4DH59	902 aa		2.94	□□□□□ -1.94
HDAC9-222	ENST00000474742	GTPBP6	O43824	516 aa	Predicted RBP	2.94	□□□□□ -1.94
HDAC9-222	ENST00000474742	PPP1R18	Q6NYC8	613 aa		2.94	□□□□□ -1.94
HDAC9-222	ENST00000474742	SAMD7	Q7Z3H4	446 aa		2.94	□□□□□ -1.94
HDAC9-222	ENST00000474742	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	2.94	□□□□□ -1.94
HDAC9-222	ENST00000474742		V9GY48	417 aa	Predicted RBP	2.94	□□□□□ -1.94
HDAC9-222	ENST00000474742	SMAP	O00193	183 aa		2.93	□□□□□ -1.94
HDAC9-222	ENST00000474742	NECTIN2	Q92692	538 aa		2.93	□□□□□ -1.94
HDAC9-222	ENST00000474742	MTR	Q99707	1265 aa		2.93	□□□□□ -1.94
HDAC9-222	ENST00000474742	PNMA3	Q9UL41	463 aa		2.93	□□□□□ -1.94
HDAC9-222	ENST00000474742	COPS2	P61201	443 aa		2.92	□□□□□ -1.94
HDAC9-222	ENST00000474742	EN1	Q05925	392 aa	Predicted RBP	2.92	□□□□□ -1.94
HDAC9-222	ENST00000474742	PKDCC	Q504Y2	493 aa		2.92	□□□□□ -1.94
HDAC9-222	ENST00000474742	TJAP1	Q5JTD0	557 aa		2.92	□□□□□ -1.94
HDAC9-222	ENST00000474742	CERK	Q8TCT0	537 aa		2.92	□□□□□ -1.94
HDAC9-222	ENST00000474742	CDCA7L	Q96GN5	454 aa		2.92	□□□□□ -1.94
HDAC9-222	ENST00000474742	TSKS	Q9UJT2	592 aa		2.92	□□□□□ -1.94
HDAC9-222	ENST00000474742	GRXCR2	A6NFK2	248 aa		2.91	□□□□□ -1.94
HDAC9-222	ENST00000474742	PRSS12	P56730	875 aa		2.91	□□□□□ -1.94
HDAC9-222	ENST00000474742	TSR1	Q2NL82	804 aa	Known RBP	2.91	□□□□□ -1.94
HDAC9-222	ENST00000474742	CADPS2	Q86UW7	1296 aa		2.91	□□□□□ -1.94
HDAC9-222	ENST00000474742	ZNF516	Q92618	1163 aa		2.91	□□□□□ -1.94
HDAC9-222	ENST00000474742	TATDN2	Q93075	761 aa		2.91	□□□□□ -1.94
HDAC9-222	ENST00000474742	SPDYE16	A6NNV3	312 aa	Predicted RBP	2.9	□□□□□ -1.95
HDAC9-222	ENST00000474742	NUDT18	Q6ZVK8	323 aa		2.9	□□□□□ -1.95
HDAC9-222	ENST00000474742	SLF2	Q8IX21	1173 aa		2.9	□□□□□ -1.95
HDAC9-222	ENST00000474742	ZNF775	Q96BV0	537 aa	Predicted RBP	2.9	□□□□□ -1.95
HDAC9-222	ENST00000474742	WDR70	Q9NW82	654 aa		2.9	□□□□□ -1.95
HDAC9-222	ENST00000474742	LCE2B	O14633	110 aa		2.89	□□□□□ -1.95
HDAC9-222	ENST00000474742	SLC19A1	P41440	591 aa		2.89	□□□□□ -1.95
HDAC9-222	ENST00000474742	APLP1	P51693	650 aa		2.89	□□□□□ -1.95
HDAC9-222	ENST00000474742	CAMK2B	Q13554	666 aa		2.89	□□□□□ -1.95
HDAC9-222	ENST00000474742	PRR14	Q9BWN1	585 aa		2.89	□□□□□ -1.95
HDAC9-222	ENST00000474742	FAM187A	A6NFU0	413 aa		2.88	□□□□□ -1.95
HDAC9-222	ENST00000474742	PDIA6	Q15084	440 aa		2.88	□□□□□ -1.95
HDAC9-222	ENST00000474742	SWT1	Q5T5J6	900 aa	Known RBP	2.88	□□□□□ -1.95
HDAC9-222	ENST00000474742	NKX2-3	Q8TAU0	364 aa		2.88	□□□□□ -1.95
HDAC9-222	ENST00000474742	TMUB1	Q9BVT8	246 aa		2.88	□□□□□ -1.95
HDAC9-222	ENST00000474742	PCDHB3	Q9Y5E6	796 aa		2.88	□□□□□ -1.95
HDAC9-222	ENST00000474742	ZPR1	O75312	459 aa		2.87	□□□□□ -1.95
HDAC9-222	ENST00000474742	DGAT1	O75907	488 aa		2.87	□□□□□ -1.95
HDAC9-222	ENST00000474742	E2F4	Q16254	413 aa		2.86	□□□□□ -1.95
HDAC9-222	ENST00000474742	KMT5B	Q4FZB7	885 aa		2.86	□□□□□ -1.95
HDAC9-222	ENST00000474742	ZNF697	Q5TEC3	545 aa		2.86	□□□□□ -1.95
HDAC9-222	ENST00000474742	BBX	Q8WY36	941 aa	Predicted RBP	2.86	□□□□□ -1.95
HDAC9-222	ENST00000474742	FAM198A	Q9UFP1	575 aa		2.86	□□□□□ -1.95
HDAC9-222	ENST00000474742	RNF223	E7ERA6	249 aa		2.85	□□□□□ -1.95
HDAC9-222	ENST00000474742	TNFRSF10A	O00220	468 aa		2.85	□□□□□ -1.95
HDAC9-222	ENST00000474742	MYT1	Q01538	1121 aa		2.85	□□□□□ -1.95
HDAC9-222	ENST00000474742	BLOC1S3	Q6QNY0	202 aa		2.85	□□□□□ -1.95
HDAC9-222	ENST00000474742	PADI6	Q6TGC4	694 aa		2.85	□□□□□ -1.95
HDAC9-222	ENST00000474742	ZNF598	Q86UK7	904 aa	Known RBP	2.85	□□□□□ -1.95
HDAC9-222	ENST00000474742	CDHR5	Q9HBB8	845 aa		2.85	□□□□□ -1.95
HDAC9-222	ENST00000474742	C3orf80	F5H4A9	247 aa		2.84	□□□□□ -1.95
HDAC9-222	ENST00000474742	FOXC1	Q12948	553 aa		2.84	□□□□□ -1.95
HDAC9-222	ENST00000474742	SPRYD7	Q5W111	196 aa		2.84	□□□□□ -1.95
HDAC9-222	ENST00000474742	ANKLE1	Q8NAG6	615 aa		2.84	□□□□□ -1.95

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