RNA–Protein interactions for RNA: ENST00000474323.5

SAMM50-203, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 2,368 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-203ENST00000474323 TSPY4P0CV99 314 aa19.47■□□□□ 0.71
SAMM50-203ENST00000474323 TSPY10P0CW01 314 aa19.47■□□□□ 0.71
SAMM50-203ENST00000474323 ANKRD30AQ9BXX3 1397 aa19.47■□□□□ 0.71
SAMM50-203ENST00000474323 WDR7Q9Y4E6 1490 aa19.46■□□□□ 0.71
SAMM50-203ENST00000474323 SYCP2Q9BX26 1530 aa19.46■□□□□ 0.71
SAMM50-203ENST00000474323 PPM1GO15355 546 aaPredicted RBP19.46■□□□□ 0.71
SAMM50-203ENST00000474323 ARHGEF5Q12774 1597 aa19.45■□□□□ 0.7
SAMM50-203ENST00000474323 SHANK2Q9UPX8 1470 aa19.45■□□□□ 0.7
SAMM50-203ENST00000474323 PLCH2O75038 1416 aa19.44■□□□□ 0.7
SAMM50-203ENST00000474323 CCDC141Q6ZP82 1450 aa19.43■□□□□ 0.7
SAMM50-203ENST00000474323 TCERG1O14776 1098 aaKnown RBP19.43■□□□□ 0.7
SAMM50-203ENST00000474323 DENND4BO75064 1496 aaPredicted RBP19.43■□□□□ 0.7
SAMM50-203ENST00000474323 ASXL2Q76L83 1435 aa19.42■□□□□ 0.7
SAMM50-203ENST00000474323 MPHOSPH9Q99550 1183 aa19.42■□□□□ 0.7
SAMM50-203ENST00000474323 NPM1P06748 294 aaKnown RBP eCLIP19.42■□□□□ 0.7
SAMM50-203ENST00000474323 AMER1Q5JTC6 1135 aaPredicted RBP19.42■□□□□ 0.7
SAMM50-203ENST00000474323 EFCAB2Q5VUJ9 269 aa19.4■□□□□ 0.7
SAMM50-203ENST00000474323 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.4■□□□□ 0.7
SAMM50-203ENST00000474323 ANKRD50Q9ULJ7 1429 aa19.39■□□□□ 0.69
SAMM50-203ENST00000474323 FOXD1Q16676 465 aa19.39■□□□□ 0.69
SAMM50-203ENST00000474323 RSPH4AQ5TD94 716 aa19.39■□□□□ 0.69
SAMM50-203ENST00000474323 POLR1AO95602 1720 aaPredicted RBP19.38■□□□□ 0.69
SAMM50-203ENST00000474323 KIF7Q2M1P5 1343 aa19.38■□□□□ 0.69
SAMM50-203ENST00000474323 ARHGEF12Q9NZN5 1544 aa19.38■□□□□ 0.69
SAMM50-203ENST00000474323 L3MBTL2Q969R5 705 aa19.37■□□□□ 0.69
SAMM50-203ENST00000474323 LAS1LQ9Y4W2 734 aaKnown RBP19.37■□□□□ 0.69
SAMM50-203ENST00000474323 PLEKHH2Q8IVE3 1493 aa19.37■□□□□ 0.69
SAMM50-203ENST00000474323 KIF15Q9NS87 1388 aa19.37■□□□□ 0.69
SAMM50-203ENST00000474323 KIAA1107Q9UPP5 1409 aa19.36■□□□□ 0.69
SAMM50-203ENST00000474323 MS4A1P11836 297 aa19.36■□□□□ 0.69
SAMM50-203ENST00000474323 NPM2Q86SE8 214 aaKnown RBP19.36■□□□□ 0.69
SAMM50-203ENST00000474323 SLC4A1APQ9BWU0 796 aaKnown RBP19.36■□□□□ 0.69
SAMM50-203ENST00000474323 PDE4AP27815 886 aa19.35■□□□□ 0.69
SAMM50-203ENST00000474323 SPATA31E1Q6ZUB1 1445 aa19.35■□□□□ 0.69
SAMM50-203ENST00000474323 BACH2Q9BYV9 841 aa19.34■□□□□ 0.69
SAMM50-203ENST00000474323 ABCA9Q8IUA7 1624 aa19.34■□□□□ 0.69
SAMM50-203ENST00000474323 ABCC1P33527 1531 aa19.33■□□□□ 0.68
SAMM50-203ENST00000474323 CYB5RLQ6IPT4 315 aa19.32■□□□□ 0.68
SAMM50-203ENST00000474323 PZPP20742 1482 aa19.31■□□□□ 0.68
SAMM50-203ENST00000474323 GSE1Q14687 1217 aa19.31■□□□□ 0.68
SAMM50-203ENST00000474323 ARAP3Q8WWN8 1544 aa19.31■□□□□ 0.68
SAMM50-203ENST00000474323 TULP1O00294 542 aaPredicted RBP19.3■□□□□ 0.68
SAMM50-203ENST00000474323 MAST1Q9Y2H9 1570 aa19.3■□□□□ 0.68
SAMM50-203ENST00000474323 TRAPPC8Q9Y2L5 1435 aa19.3■□□□□ 0.68
SAMM50-203ENST00000474323 FANCAO15360 1455 aa19.3■□□□□ 0.68
SAMM50-203ENST00000474323 DHX29Q7Z478 1369 aaKnown RBP19.29■□□□□ 0.68
SAMM50-203ENST00000474323 DDRGK1Q96HY6 314 aa19.29■□□□□ 0.68
SAMM50-203ENST00000474323 RIMBP3CA6NJZ7 1639 aa19.28■□□□□ 0.68
SAMM50-203ENST00000474323 RIMBP3BA6NNM3 1639 aa19.28■□□□□ 0.68
SAMM50-203ENST00000474323 RIMBP3Q9UFD9 1639 aa19.28■□□□□ 0.68
SAMM50-203ENST00000474323 NUP155O75694 1391 aa19.27■□□□□ 0.68
SAMM50-203ENST00000474323 NBPF8Q3BBV2 869 aa19.27■□□□□ 0.68
SAMM50-203ENST00000474323 BRPF3Q9ULD4 1205 aa19.27■□□□□ 0.67
SAMM50-203ENST00000474323 RRP1P56182 461 aaKnown RBP19.26■□□□□ 0.67
SAMM50-203ENST00000474323 AFAP1Q8N556 730 aa19.26■□□□□ 0.67
SAMM50-203ENST00000474323 PNISRQ8TF01 805 aaKnown RBP19.26■□□□□ 0.67
SAMM50-203ENST00000474323 ANKRD30BQ9BXX2 1392 aa19.26■□□□□ 0.67
SAMM50-203ENST00000474323 RPRD2Q5VT52 1461 aaKnown RBP19.25■□□□□ 0.67
SAMM50-203ENST00000474323 PLXNC1O60486 1568 aa19.24■□□□□ 0.67
SAMM50-203ENST00000474323 PKD2Q13563 968 aa19.24■□□□□ 0.67
SAMM50-203ENST00000474323 ADGRL1O94910 1474 aa19.23■□□□□ 0.67
SAMM50-203ENST00000474323 EXOC6Q8TAG9 804 aa19.22■□□□□ 0.67
SAMM50-203ENST00000474323 TEX14Q8IWB6 1497 aa19.22■□□□□ 0.67
SAMM50-203ENST00000474323 SPAG9O60271 1321 aaKnown RBP19.22■□□□□ 0.67
SAMM50-203ENST00000474323 ARID4BQ4LE39 1312 aaPredicted RBP19.21■□□□□ 0.67
SAMM50-203ENST00000474323 CD109Q6YHK3 1445 aa19.2■□□□□ 0.66
SAMM50-203ENST00000474323 SCAPERQ9BY12 1400 aa19.2■□□□□ 0.66
SAMM50-203ENST00000474323 NFKBIBQ15653 356 aa19.2■□□□□ 0.66
SAMM50-203ENST00000474323 TMC1Q8TDI8 760 aa19.19■□□□□ 0.66
SAMM50-203ENST00000474323 KDM5DQ9BY66 1539 aa19.19■□□□□ 0.66
SAMM50-203ENST00000474323 DUOX2Q9NRD8 1548 aa19.19■□□□□ 0.66
SAMM50-203ENST00000474323 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.19■□□□□ 0.66
SAMM50-203ENST00000474323 LRPPRCP42704 1394 aaKnown RBP19.18■□□□□ 0.66
SAMM50-203ENST00000474323 RSPH6AQ9H0K4 717 aa19.17■□□□□ 0.66
SAMM50-203ENST00000474323 RCAN3Q9UKA8 241 aa19.17■□□□□ 0.66
SAMM50-203ENST00000474323 ZFYVE16Q7Z3T8 1539 aa19.17■□□□□ 0.66
SAMM50-203ENST00000474323 FRAT1Q92837 279 aaPredicted RBP19.15■□□□□ 0.66
SAMM50-203ENST00000474323 FAM135AQ9P2D6 1515 aa19.15■□□□□ 0.66
SAMM50-203ENST00000474323 HOMEZQ8IX15 550 aa19.14■□□□□ 0.66
SAMM50-203ENST00000474323 RTEL1-TNFRSF6BF6WH68 1400 aa19.14■□□□□ 0.65
SAMM50-203ENST00000474323 ERBINQ96RT1 1412 aa19.14■□□□□ 0.65
SAMM50-203ENST00000474323 UNC13BO14795 1591 aa19.13■□□□□ 0.65
SAMM50-203ENST00000474323 ROCK2O75116 1388 aaKnown RBP19.13■□□□□ 0.65
SAMM50-203ENST00000474323 ATP7AQ04656 1500 aa19.13■□□□□ 0.65
SAMM50-203ENST00000474323 PDE3BQ13370 1112 aa19.12■□□□□ 0.65
SAMM50-203ENST00000474323 INO80Q9ULG1 1556 aaPredicted RBP19.12■□□□□ 0.65
SAMM50-203ENST00000474323 BRD4O60885 1362 aaPredicted RBP19.12■□□□□ 0.65
SAMM50-203ENST00000474323 KCNA4P22459 653 aa19.11■□□□□ 0.65
SAMM50-203ENST00000474323 FAM43AQ8N2R8 423 aa19.11■□□□□ 0.65
SAMM50-203ENST00000474323 KTN1Q86UP2 1357 aaKnown RBP19.11■□□□□ 0.65
SAMM50-203ENST00000474323 CFAP74Q9C0B2 1584 aa19.1■□□□□ 0.65
SAMM50-203ENST00000474323 CNGB1Q14028 1251 aaPredicted RBP19.1■□□□□ 0.65
SAMM50-203ENST00000474323 BCORL1Q5H9F3 1711 aa19.09■□□□□ 0.65
SAMM50-203ENST00000474323 USP47Q96K76 1375 aa19.08■□□□□ 0.65
SAMM50-203ENST00000474323 SENP3-EIF4A1A0A087X0R7 540 aa19.07■□□□□ 0.64
SAMM50-203ENST00000474323 ZNF518AQ6AHZ1 1483 aa19.07■□□□□ 0.64
SAMM50-203ENST00000474323 IQGAP3Q86VI3 1631 aa19.07■□□□□ 0.64
SAMM50-203ENST00000474323 MYBBP1AQ9BQG0 1328 aaKnown RBP19.06■□□□□ 0.64
SAMM50-203ENST00000474323 MAGI2Q86UL8 1455 aa19.05■□□□□ 0.64
SAMM50-203ENST00000474323 RALBP1Q15311 655 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms