RNA–Protein interactions for RNA: ENST00000473654.5

RABL3-204, Transcript of RAB, member of RAS oncogene family like 3, human

TSL 5

Gene RABL3, Length 2,370 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RABL3-204	ENST00000473654	RCAN3	Q9UKA8	241 aa		13.95	□□□□□ -0.18
RABL3-204	ENST00000473654	ARID4B	Q4LE39	1312 aa	Predicted RBP	13.94	□□□□□ -0.18
RABL3-204	ENST00000473654	RIMBP3C	A6NJZ7	1639 aa		13.94	□□□□□ -0.18
RABL3-204	ENST00000473654	RIMBP3B	A6NNM3	1639 aa		13.94	□□□□□ -0.18
RABL3-204	ENST00000473654	RIMBP3	Q9UFD9	1639 aa		13.94	□□□□□ -0.18
RABL3-204	ENST00000473654	ABCC10	Q5T3U5	1492 aa		13.94	□□□□□ -0.18
RABL3-204	ENST00000473654	TMC1	Q8TDI8	760 aa		13.94	□□□□□ -0.18
RABL3-204	ENST00000473654	GPATCH8	Q9UKJ3	1502 aa	Known RBP	13.94	□□□□□ -0.18
RABL3-204	ENST00000473654	LRPPRC	P42704	1394 aa	Known RBP	13.93	□□□□□ -0.18
RABL3-204	ENST00000473654	PDE3B	Q13370	1112 aa		13.93	□□□□□ -0.18
RABL3-204	ENST00000473654	RPRD2	Q5VT52	1461 aa	Known RBP	13.93	□□□□□ -0.18
RABL3-204	ENST00000473654	NPM1	P06748	294 aa	Known RBP eCLIP	13.93	□□□□□ -0.18
RABL3-204	ENST00000473654	MPHOSPH9	Q99550	1183 aa		13.93	□□□□□ -0.18
RABL3-204	ENST00000473654	NBPF8	Q3BBV2	869 aa		13.92	□□□□□ -0.18
RABL3-204	ENST00000473654	CFDP1	Q9UEE9	299 aa	Predicted RBP	13.92	□□□□□ -0.18
RABL3-204	ENST00000473654	ZNF644	Q9H582	1327 aa	Predicted RBP	13.92	□□□□□ -0.18
RABL3-204	ENST00000473654	TEX14	Q8IWB6	1497 aa		13.91	□□□□□ -0.18
RABL3-204	ENST00000473654	TCOF1	Q13428	1488 aa	Known RBP	13.91	□□□□□ -0.18
RABL3-204	ENST00000473654	ROCK2	O75116	1388 aa	Known RBP	13.9	□□□□□ -0.18
RABL3-204	ENST00000473654	KTN1	Q86UP2	1357 aa	Known RBP	13.9	□□□□□ -0.18
RABL3-204	ENST00000473654	BRD4	O60885	1362 aa	Predicted RBP	13.89	□□□□□ -0.19
RABL3-204	ENST00000473654	DCAF11	Q8TEB1	546 aa		13.88	□□□□□ -0.19
RABL3-204	ENST00000473654	RRP7BP	Q9NSQ0	103 aa		13.88	□□□□□ -0.19
RABL3-204	ENST00000473654	ASXL2	Q76L83	1435 aa		13.88	□□□□□ -0.19
RABL3-204	ENST00000473654	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	13.88	□□□□□ -0.19
RABL3-204	ENST00000473654	ZNF777	Q9ULD5	760 aa	Predicted RBP	13.88	□□□□□ -0.19
RABL3-204	ENST00000473654	WDR7	Q9Y4E6	1490 aa		13.88	□□□□□ -0.19
RABL3-204	ENST00000473654	ANKRD30B	Q9BXX2	1392 aa		13.87	□□□□□ -0.19
RABL3-204	ENST00000473654	FRAT2	O75474	233 aa	Predicted RBP	13.87	□□□□□ -0.19
RABL3-204	ENST00000473654	L1TD1	Q5T7N2	865 aa	Known RBP	13.87	□□□□□ -0.19
RABL3-204	ENST00000473654	SLC4A3	P48751	1232 aa		13.86	□□□□□ -0.19
RABL3-204	ENST00000473654	KIF15	Q9NS87	1388 aa		13.86	□□□□□ -0.19
RABL3-204	ENST00000473654	CDC42BPA	Q5VT25	1732 aa		13.86	□□□□□ -0.19
RABL3-204	ENST00000473654	TTC37	Q6PGP7	1564 aa		13.85	□□□□□ -0.19
RABL3-204	ENST00000473654	ITSN2	Q9NZM3	1697 aa		13.85	□□□□□ -0.19
RABL3-204	ENST00000473654	KDM6B	O15054	1643 aa		13.85	□□□□□ -0.19
RABL3-204	ENST00000473654	FAM161A	Q3B820	660 aa		13.85	□□□□□ -0.19
RABL3-204	ENST00000473654	BCORL1	Q5H9F3	1711 aa		13.84	□□□□□ -0.19
RABL3-204	ENST00000473654	MYBBP1A	Q9BQG0	1328 aa	Known RBP	13.84	□□□□□ -0.19
RABL3-204	ENST00000473654	RALBP1	Q15311	655 aa		13.83	□□□□□ -0.19
RABL3-204	ENST00000473654	CAMSAP2	Q08AD1	1489 aa		13.83	□□□□□ -0.19
RABL3-204	ENST00000473654	ZMYND15	Q9H091	742 aa		13.83	□□□□□ -0.2
RABL3-204	ENST00000473654	RRP9	O43818	475 aa	Known RBP	13.82	□□□□□ -0.2
RABL3-204	ENST00000473654	VSIG10	Q8N0Z9	540 aa		13.82	□□□□□ -0.2
RABL3-204	ENST00000473654	RRAGD	Q9NQL2	400 aa	Predicted RBP	13.82	□□□□□ -0.2
RABL3-204	ENST00000473654	CHIC2	Q9UKJ5	165 aa		13.82	□□□□□ -0.2
RABL3-204	ENST00000473654	USP47	Q96K76	1375 aa		13.81	□□□□□ -0.2
RABL3-204	ENST00000473654	ABCC5	O15440	1437 aa		13.81	□□□□□ -0.2
RABL3-204	ENST00000473654	PLCH2	O75038	1416 aa		13.81	□□□□□ -0.2
RABL3-204	ENST00000473654	CDC42BPB	Q9Y5S2	1711 aa		13.81	□□□□□ -0.2
RABL3-204	ENST00000473654	CNGB1	Q14028	1251 aa	Predicted RBP	13.81	□□□□□ -0.2
RABL3-204	ENST00000473654	CENPQ	Q7L2Z9	268 aa	Predicted RBP	13.81	□□□□□ -0.2
RABL3-204	ENST00000473654	PREX2	Q70Z35	1606 aa		13.8	□□□□□ -0.2
RABL3-204	ENST00000473654	DAPK1	P53355	1430 aa		13.8	□□□□□ -0.2
RABL3-204	ENST00000473654	SENP3-EIF4A1	A0A087X0R7	540 aa		13.8	□□□□□ -0.2
RABL3-204	ENST00000473654	HSP90AA2P	Q14568	343 aa	Predicted RBP	13.8	□□□□□ -0.2
RABL3-204	ENST00000473654	CRBN	Q96SW2	442 aa		13.8	□□□□□ -0.2
RABL3-204	ENST00000473654	KDM5C	P41229	1560 aa		13.79	□□□□□ -0.2
RABL3-204	ENST00000473654	KDM2B	Q8NHM5	1336 aa		13.79	□□□□□ -0.2
RABL3-204	ENST00000473654	HNRNPM	P52272	730 aa	Known RBP eCLIP	13.79	□□□□□ -0.2
RABL3-204	ENST00000473654	POLR3GL	Q9BT43	218 aa		13.79	□□□□□ -0.2
RABL3-204	ENST00000473654	ARHGAP5	Q13017	1502 aa		13.79	□□□□□ -0.2
RABL3-204	ENST00000473654	HSP90AA1	P07900	732 aa	Known RBP	13.78	□□□□□ -0.2
RABL3-204	ENST00000473654	C8orf34	Q49A92	452 aa		13.78	□□□□□ -0.2
RABL3-204	ENST00000473654	EFCAB2	Q5VUJ9	269 aa		13.78	□□□□□ -0.2
RABL3-204	ENST00000473654	INSR	P06213	1382 aa		13.78	□□□□□ -0.2
RABL3-204	ENST00000473654	MBD5	Q9P267	1494 aa		13.78	□□□□□ -0.2
RABL3-204	ENST00000473654	MYO5C	Q9NQX4	1742 aa		13.78	□□□□□ -0.2
RABL3-204	ENST00000473654	DNMT1	P26358	1616 aa	Known RBP	13.77	□□□□□ -0.21
RABL3-204	ENST00000473654	ABCA9	Q8IUA7	1624 aa		13.77	□□□□□ -0.21
RABL3-204	ENST00000473654	SAMD9L	Q8IVG5	1584 aa		13.76	□□□□□ -0.21
RABL3-204	ENST00000473654	NAP1L5	Q96NT1	182 aa	Predicted RBP	13.76	□□□□□ -0.21
RABL3-204	ENST00000473654	PNN	Q9H307	717 aa	Known RBP	13.76	□□□□□ -0.21
RABL3-204	ENST00000473654	ZMYM4	Q5VZL5	1548 aa		13.76	□□□□□ -0.21
RABL3-204	ENST00000473654	ROCK1	Q13464	1354 aa		13.75	□□□□□ -0.21
RABL3-204	ENST00000473654	CLCN1	P35523	988 aa		13.75	□□□□□ -0.21
RABL3-204	ENST00000473654	PLEKHH2	Q8IVE3	1493 aa		13.74	□□□□□ -0.21
RABL3-204	ENST00000473654	PLIN1	O60240	522 aa		13.74	□□□□□ -0.21
RABL3-204	ENST00000473654	NLRP13	Q86W25	1043 aa		13.74	□□□□□ -0.21
RABL3-204	ENST00000473654	SKAP1	Q86WV1	359 aa		13.74	□□□□□ -0.21
RABL3-204	ENST00000473654	RSPH4A	Q5TD94	716 aa		13.73	□□□□□ -0.21
RABL3-204	ENST00000473654	POGK	Q9P215	609 aa		13.73	□□□□□ -0.21
RABL3-204	ENST00000473654	ARAP3	Q8WWN8	1544 aa		13.73	□□□□□ -0.21
RABL3-204	ENST00000473654	KIAA1107	Q9UPP5	1409 aa		13.73	□□□□□ -0.21
RABL3-204	ENST00000473654		E9PCH4	1651 aa		13.73	□□□□□ -0.21
RABL3-204	ENST00000473654	VIRMA	Q69YN4	1812 aa	Known RBP	13.72	□□□□□ -0.21
RABL3-204	ENST00000473654	TSPY4	P0CV99	314 aa		13.72	□□□□□ -0.21
RABL3-204	ENST00000473654	TSPY10	P0CW01	314 aa		13.72	□□□□□ -0.21
RABL3-204	ENST00000473654	CD109	Q6YHK3	1445 aa		13.72	□□□□□ -0.21
RABL3-204	ENST00000473654	ARHGEF12	Q9NZN5	1544 aa		13.72	□□□□□ -0.21
RABL3-204	ENST00000473654	BECN1	Q14457	450 aa		13.72	□□□□□ -0.21
RABL3-204	ENST00000473654	SLC4A1AP	Q9BWU0	796 aa	Known RBP	13.72	□□□□□ -0.21
RABL3-204	ENST00000473654	SYCP2	Q9BX26	1530 aa		13.71	□□□□□ -0.21
RABL3-204	ENST00000473654	CDCA7L	Q96GN5	454 aa		13.71	□□□□□ -0.21
RABL3-204	ENST00000473654	ARHGEF5	Q12774	1597 aa		13.71	□□□□□ -0.22
RABL3-204	ENST00000473654	FANCA	O15360	1455 aa		13.7	□□□□□ -0.22
RABL3-204	ENST00000473654	CCDC141	Q6ZP82	1450 aa		13.69	□□□□□ -0.22
RABL3-204	ENST00000473654	BLM	P54132	1417 aa	Predicted RBP	13.69	□□□□□ -0.22
RABL3-204	ENST00000473654	C9orf84	Q5VXU9	1444 aa		13.69	□□□□□ -0.22
RABL3-204	ENST00000473654	RALGAPB	Q86X10	1494 aa		13.69	□□□□□ -0.22

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