RNA–Protein interactions for RNA: ENST00000473608.1

RAB5A-207, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5A, Length 868 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-207ENST00000473608 COL9A1P20849 921 aa11.25□□□□□ -0.61
RAB5A-207ENST00000473608 FBXW7Q969H0 707 aa11.24□□□□□ -0.61
RAB5A-207ENST00000473608 KIAA1468Q9P260 1216 aa11.24□□□□□ -0.61
RAB5A-207ENST00000473608 PCDHGA10Q9Y5H3 936 aa11.24□□□□□ -0.61
RAB5A-207ENST00000473608 CHGAP10645 457 aaKnown RBP11.23□□□□□ -0.61
RAB5A-207ENST00000473608 NCKAP5LQ9HCH0 1330 aa11.23□□□□□ -0.61
RAB5A-207ENST00000473608 LCE2BO14633 110 aa11.22□□□□□ -0.61
RAB5A-207ENST00000473608 ONECUT3O60422 494 aaPredicted RBP11.22□□□□□ -0.61
RAB5A-207ENST00000473608 TYW1BQ6NUM6 668 aa11.21□□□□□ -0.61
RAB5A-207ENST00000473608 DDX27Q96GQ7 796 aaKnown RBP11.2□□□□□ -0.62
RAB5A-207ENST00000473608 RTN4Q9NQC3 1192 aaKnown RBP11.2□□□□□ -0.62
RAB5A-207ENST00000473608 DNAJC5Q9H3Z4 198 aa11.19□□□□□ -0.62
RAB5A-207ENST00000473608 TSR3Q9UJK0 312 aaKnown RBP11.19□□□□□ -0.62
RAB5A-207ENST00000473608 PHF14O94880 888 aa11.18□□□□□ -0.62
RAB5A-207ENST00000473608 LARP6Q9BRS8 491 aaKnown RBP11.18□□□□□ -0.62
RAB5A-207ENST00000473608 NKX1-1Q15270 411 aaPredicted RBP11.17□□□□□ -0.62
RAB5A-207ENST00000473608 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.17□□□□□ -0.62
RAB5A-207ENST00000473608 SEPT9Q9UHD8 586 aaPredicted RBP11.17□□□□□ -0.62
RAB5A-207ENST00000473608 FAM98CQ17RN3 349 aaKnown RBP11.16□□□□□ -0.62
RAB5A-207ENST00000473608 NRG2O14511 850 aaPredicted RBP11.15□□□□□ -0.62
RAB5A-207ENST00000473608 LRCH3Q96II8 777 aa11.15□□□□□ -0.62
RAB5A-207ENST00000473608 HPS5Q9UPZ3 1129 aa11.15□□□□□ -0.62
RAB5A-207ENST00000473608 TRIM6-TRIM34B2RNG4 842 aa11.12□□□□□ -0.63
RAB5A-207ENST00000473608 AMER1Q5JTC6 1135 aaPredicted RBP11.12□□□□□ -0.63
RAB5A-207ENST00000473608 PRKD2Q9BZL6 878 aa11.12□□□□□ -0.63
RAB5A-207ENST00000473608 EMILIN3Q9NT22 766 aa11.12□□□□□ -0.63
RAB5A-207ENST00000473608 C6orf132Q5T0Z8 1188 aa11.11□□□□□ -0.63
RAB5A-207ENST00000473608 MFSD10Q14728 455 aa11.1□□□□□ -0.63
RAB5A-207ENST00000473608 ZNF787Q6DD87 383 aa11.09□□□□□ -0.63
RAB5A-207ENST00000473608 EPAS1Q99814 870 aa11.09□□□□□ -0.63
RAB5A-207ENST00000473608 PPP4CP60510 307 aa11.08□□□□□ -0.64
RAB5A-207ENST00000473608 V9GY48 417 aaPredicted RBP11.07□□□□□ -0.64
RAB5A-207ENST00000473608 TJAP1Q5JTD0 557 aa11.04□□□□□ -0.64
RAB5A-207ENST00000473608 PPP1R18Q6NYC8 613 aa11.02□□□□□ -0.65
RAB5A-207ENST00000473608 PACS2Q86VP3 889 aa11.02□□□□□ -0.65
RAB5A-207ENST00000473608 IL21Q9HBE4 155 aa11.01□□□□□ -0.65
RAB5A-207ENST00000473608 ZNF775Q96BV0 537 aaPredicted RBP10.99□□□□□ -0.65
RAB5A-207ENST00000473608 RBM33Q96EV2 1170 aaKnown RBP10.99□□□□□ -0.65
RAB5A-207ENST00000473608 PDZRN3Q9UPQ7 1066 aa10.99□□□□□ -0.65
RAB5A-207ENST00000473608 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.98□□□□□ -0.65
RAB5A-207ENST00000473608 MTRQ99707 1265 aa10.97□□□□□ -0.65
RAB5A-207ENST00000473608 GTPBP6O43824 516 aaPredicted RBP10.96□□□□□ -0.65
RAB5A-207ENST00000473608 TSKSQ9UJT2 592 aa10.95□□□□□ -0.66
RAB5A-207ENST00000473608 SAMD7Q7Z3H4 446 aa10.94□□□□□ -0.66
RAB5A-207ENST00000473608 DCAF8L2P0C7V8 631 aa10.92□□□□□ -0.66
RAB5A-207ENST00000473608 DPYSL4O14531 572 aa10.91□□□□□ -0.66
RAB5A-207ENST00000473608 DDX12PQ92771 950 aa10.91□□□□□ -0.66
RAB5A-207ENST00000473608 GGCXP38435 758 aa10.9□□□□□ -0.66
RAB5A-207ENST00000473608 ZNF516Q92618 1163 aa10.9□□□□□ -0.66
RAB5A-207ENST00000473608 CAMK2BQ13554 666 aa10.89□□□□□ -0.67
RAB5A-207ENST00000473608 MAP3K7O43318 606 aa10.88□□□□□ -0.67
RAB5A-207ENST00000473608 EN1Q05925 392 aaPredicted RBP10.88□□□□□ -0.67
RAB5A-207ENST00000473608 SMAPO00193 183 aa10.87□□□□□ -0.67
RAB5A-207ENST00000473608 HDGFP51858 240 aaKnown RBP10.86□□□□□ -0.67
RAB5A-207ENST00000473608 TSR1Q2NL82 804 aaKnown RBP10.86□□□□□ -0.67
RAB5A-207ENST00000473608 CDCA7LQ96GN5 454 aa10.86□□□□□ -0.67
RAB5A-207ENST00000473608 NBR1Q14596 966 aa10.85□□□□□ -0.67
RAB5A-207ENST00000473608 PRSS12P56730 875 aa10.84□□□□□ -0.67
RAB5A-207ENST00000473608 TMUB1Q9BVT8 246 aa10.84□□□□□ -0.67
RAB5A-207ENST00000473608 CADPS2Q86UW7 1296 aa10.83□□□□□ -0.68
RAB5A-207ENST00000473608 NKX2-3Q8TAU0 364 aa10.83□□□□□ -0.68
RAB5A-207ENST00000473608 CERKQ8TCT0 537 aa10.83□□□□□ -0.68
RAB5A-207ENST00000473608 TATDN2Q93075 761 aa10.83□□□□□ -0.68
RAB5A-207ENST00000473608 NBPF26B4DH59 902 aa10.82□□□□□ -0.68
RAB5A-207ENST00000473608 RNF40O75150 1001 aa10.82□□□□□ -0.68
RAB5A-207ENST00000473608 PNMA3Q9UL41 463 aa10.82□□□□□ -0.68
RAB5A-207ENST00000473608 APLP1P51693 650 aa10.81□□□□□ -0.68
RAB5A-207ENST00000473608 NECTIN2Q92692 538 aa10.81□□□□□ -0.68
RAB5A-207ENST00000473608 PKDCCQ504Y2 493 aa10.8□□□□□ -0.68
RAB5A-207ENST00000473608 FAM198AQ9UFP1 575 aa10.79□□□□□ -0.68
RAB5A-207ENST00000473608 DGAT1O75907 488 aa10.77□□□□□ -0.69
RAB5A-207ENST00000473608 COPS2P61201 443 aa10.76□□□□□ -0.69
RAB5A-207ENST00000473608 MYT1Q01538 1121 aa10.76□□□□□ -0.69
RAB5A-207ENST00000473608 C3orf80F5H4A9 247 aa10.75□□□□□ -0.69
RAB5A-207ENST00000473608 TRIM67Q6ZTA4 783 aa10.75□□□□□ -0.69
RAB5A-207ENST00000473608 SLC19A1P41440 591 aa10.74□□□□□ -0.69
RAB5A-207ENST00000473608 PDIA6Q15084 440 aa10.73□□□□□ -0.69
RAB5A-207ENST00000473608 NUDT18Q6ZVK8 323 aa10.73□□□□□ -0.69
RAB5A-207ENST00000473608 SPDYE16A6NNV3 312 aaPredicted RBP10.72□□□□□ -0.69
RAB5A-207ENST00000473608 ZPR1O75312 459 aa10.72□□□□□ -0.69
RAB5A-207ENST00000473608 POTECB2RU33 542 aa10.71□□□□□ -0.69
RAB5A-207ENST00000473608 SLF2Q8IX21 1173 aa10.71□□□□□ -0.69
RAB5A-207ENST00000473608 PRR20EP86478 221 aa10.69□□□□□ -0.7
RAB5A-207ENST00000473608 PRR20CP86479 221 aa10.69□□□□□ -0.7
RAB5A-207ENST00000473608 PRR20DP86480 221 aa10.69□□□□□ -0.7
RAB5A-207ENST00000473608 PRR20BP86481 221 aa10.69□□□□□ -0.7
RAB5A-207ENST00000473608 PRR20AP86496 221 aa10.69□□□□□ -0.7
RAB5A-207ENST00000473608 SPRYD7Q5W111 196 aa10.69□□□□□ -0.7
RAB5A-207ENST00000473608 RNF223E7ERA6 249 aa10.68□□□□□ -0.7
RAB5A-207ENST00000473608 SLC4A3P48751 1232 aa10.68□□□□□ -0.7
RAB5A-207ENST00000473608 TREML4Q6UXN2 200 aa10.68□□□□□ -0.7
RAB5A-207ENST00000473608 ZNF598Q86UK7 904 aaKnown RBP10.68□□□□□ -0.7
RAB5A-207ENST00000473608 RBM27Q9P2N5 1060 aaKnown RBP10.68□□□□□ -0.7
RAB5A-207ENST00000473608 SWT1Q5T5J6 900 aaKnown RBP10.67□□□□□ -0.7
RAB5A-207ENST00000473608 PRR14Q9BWN1 585 aa10.67□□□□□ -0.7
RAB5A-207ENST00000473608 FAM187AA6NFU0 413 aa10.64□□□□□ -0.71
RAB5A-207ENST00000473608 EMID1Q96A84 441 aaPredicted RBP10.64□□□□□ -0.71
RAB5A-207ENST00000473608 PCDHB3Q9Y5E6 796 aa10.64□□□□□ -0.71
RAB5A-207ENST00000473608 GRXCR2A6NFK2 248 aa10.63□□□□□ -0.71
RAB5A-207ENST00000473608 PRIM1P49642 420 aaKnown RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms