RNA–Protein interactions for RNA: ENST00000473494.6

SEC22A-204, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 1,011 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-204ENST00000473494 TSR1Q2NL82 804 aaKnown RBP12.89□□□□□ -0.35
SEC22A-204ENST00000473494 PARP9Q8IXQ6 854 aa12.89□□□□□ -0.35
SEC22A-204ENST00000473494 RIMBP2O15034 1052 aa12.88□□□□□ -0.35
SEC22A-204ENST00000473494 MAMSTRQ6ZN01 415 aa12.88□□□□□ -0.35
SEC22A-204ENST00000473494 RBM33Q96EV2 1170 aaKnown RBP12.88□□□□□ -0.35
SEC22A-204ENST00000473494 NUDT7P0C024 238 aa12.85□□□□□ -0.35
SEC22A-204ENST00000473494 GPR153Q6NV75 609 aa12.85□□□□□ -0.35
SEC22A-204ENST00000473494 ZDHHC16Q969W1 377 aa12.84□□□□□ -0.35
SEC22A-204ENST00000473494 ARSIQ5FYB1 569 aa12.83□□□□□ -0.36
SEC22A-204ENST00000473494 ZNF454Q8N9F8 522 aa12.83□□□□□ -0.36
SEC22A-204ENST00000473494 CERKQ8TCT0 537 aa12.83□□□□□ -0.36
SEC22A-204ENST00000473494 KHSRPQ92945 711 aaKnown RBP eCLIP12.83□□□□□ -0.366e-7■■■■□ 20.1
SEC22A-204ENST00000473494 RBM27Q9P2N5 1060 aaKnown RBP12.82□□□□□ -0.36
SEC22A-204ENST00000473494 DDRGK1Q96HY6 314 aa12.81□□□□□ -0.36
SEC22A-204ENST00000473494 TTLL12Q14166 644 aaPredicted RBP12.8□□□□□ -0.36
SEC22A-204ENST00000473494 C6orf132Q5T0Z8 1188 aa12.8□□□□□ -0.36
SEC22A-204ENST00000473494 IL27Q8NEV9 243 aa12.8□□□□□ -0.36
SEC22A-204ENST00000473494 FAM117AQ9C073 453 aa12.8□□□□□ -0.36
SEC22A-204ENST00000473494 ADAM33Q9BZ11 813 aa12.79□□□□□ -0.36
SEC22A-204ENST00000473494 ZNF710Q8N1W2 664 aa12.78□□□□□ -0.36
SEC22A-204ENST00000473494 PLEKHG3A1L390 1219 aa12.77□□□□□ -0.37
SEC22A-204ENST00000473494 GIGYF2Q6Y7W6 1299 aaKnown RBP12.77□□□□□ -0.37
SEC22A-204ENST00000473494 PADI6Q6TGC4 694 aa12.76□□□□□ -0.37
SEC22A-204ENST00000473494 TTC13Q8NBP0 860 aa12.76□□□□□ -0.37
SEC22A-204ENST00000473494 TMUB1Q9BVT8 246 aa12.76□□□□□ -0.37
SEC22A-204ENST00000473494 PSDA5PKW4 1024 aaPredicted RBP12.74□□□□□ -0.37
SEC22A-204ENST00000473494 REPIN1Q9BWE0 567 aaKnown RBP12.74□□□□□ -0.37
SEC22A-204ENST00000473494 LHX6Q9UPM6 363 aa12.74□□□□□ -0.37
SEC22A-204ENST00000473494 CLCN1P35523 988 aa12.73□□□□□ -0.37
SEC22A-204ENST00000473494 PPP4R3BQ5MIZ7 849 aa12.73□□□□□ -0.37
SEC22A-204ENST00000473494 METTL3Q86U44 580 aaKnown RBP12.73□□□□□ -0.37
SEC22A-204ENST00000473494 PHOX2BQ99453 314 aa12.73□□□□□ -0.37
SEC22A-204ENST00000473494 SNPHO15079 494 aa12.72□□□□□ -0.37
SEC22A-204ENST00000473494 C14orf37Q86TY3 774 aa12.72□□□□□ -0.37
SEC22A-204ENST00000473494 GPCPD1Q9NPB8 672 aa12.72□□□□□ -0.37
SEC22A-204ENST00000473494 ADGRG1Q9Y653 693 aa12.72□□□□□ -0.37
SEC22A-204ENST00000473494 MS4A1P11836 297 aa12.71□□□□□ -0.37
SEC22A-204ENST00000473494 BCL2L12Q9HB09 334 aa12.71□□□□□ -0.37
SEC22A-204ENST00000473494 OATP04181 439 aa12.7□□□□□ -0.38
SEC22A-204ENST00000473494 HOXB1P14653 301 aaPredicted RBP12.7□□□□□ -0.38
SEC22A-204ENST00000473494 PXYLP1Q8TE99 480 aa12.7□□□□□ -0.38
SEC22A-204ENST00000473494 PRSS12P56730 875 aa12.68□□□□□ -0.38
SEC22A-204ENST00000473494 MDM2Q00987 491 aaPredicted RBP12.68□□□□□ -0.38
SEC22A-204ENST00000473494 GOPCQ9HD26 462 aa12.68□□□□□ -0.38
SEC22A-204ENST00000473494 PPP1R3GB7ZBB8 358 aa12.66□□□□□ -0.38
SEC22A-204ENST00000473494 FAM161AQ3B820 660 aa12.66□□□□□ -0.38
SEC22A-204ENST00000473494 CDCA7LQ96GN5 454 aa12.66□□□□□ -0.38
SEC22A-204ENST00000473494 COL9A1P20849 921 aa12.64□□□□□ -0.39
SEC22A-204ENST00000473494 FAM217BQ9NTX9 383 aaPredicted RBP12.63□□□□□ -0.39
SEC22A-204ENST00000473494 PTPREP23469 700 aa12.62□□□□□ -0.39
SEC22A-204ENST00000473494 FAM198AQ9UFP1 575 aa12.62□□□□□ -0.39
SEC22A-204ENST00000473494 RBM46Q8TBY0 533 aaKnown RBP12.61□□□□□ -0.39
SEC22A-204ENST00000473494 OTUD5Q96G74 571 aa12.61□□□□□ -0.39
SEC22A-204ENST00000473494 SSTR3P32745 418 aaPredicted RBP12.59□□□□□ -0.39
SEC22A-204ENST00000473494 SH3D19Q5HYK7 790 aa12.59□□□□□ -0.39
SEC22A-204ENST00000473494 NLRP7Q8WX94 980 aa12.59□□□□□ -0.39
SEC22A-204ENST00000473494 TSKSQ9UJT2 592 aa12.58□□□□□ -0.4
SEC22A-204ENST00000473494 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.57□□□□□ -0.4
SEC22A-204ENST00000473494 TRIM6-TRIM34B2RNG4 842 aa12.55□□□□□ -0.4
SEC22A-204ENST00000473494 NBPF26B4DH59 902 aa12.55□□□□□ -0.4
SEC22A-204ENST00000473494 EYA1Q99502 592 aa12.55□□□□□ -0.4
SEC22A-204ENST00000473494 BEGAINQ9BUH8 593 aa12.54□□□□□ -0.4
SEC22A-204ENST00000473494 RCCD1A6NED2 376 aa12.52□□□□□ -0.41
SEC22A-204ENST00000473494 PCMTD1Q96MG8 357 aaPredicted RBP12.52□□□□□ -0.41
SEC22A-204ENST00000473494 RSPH6AQ9H0K4 717 aa12.52□□□□□ -0.41
SEC22A-204ENST00000473494 C3orf80F5H4A9 247 aa12.51□□□□□ -0.41
SEC22A-204ENST00000473494 ONECUT3O60422 494 aaPredicted RBP12.51□□□□□ -0.41
SEC22A-204ENST00000473494 KCNK17Q96T54 332 aa12.51□□□□□ -0.41
SEC22A-204ENST00000473494 DNAJB2P25686 324 aa12.49□□□□□ -0.41
SEC22A-204ENST00000473494 SKIV2LQ15477 1246 aaKnown RBP12.49□□□□□ -0.41
SEC22A-204ENST00000473494 NUDT18Q6ZVK8 323 aa12.49□□□□□ -0.41
SEC22A-204ENST00000473494 KCNH8Q96L42 1107 aa12.49□□□□□ -0.41
SEC22A-204ENST00000473494 TATDN2Q93075 761 aa12.48□□□□□ -0.41
SEC22A-204ENST00000473494 PROX2Q3B8N5 592 aa12.47□□□□□ -0.41
SEC22A-204ENST00000473494 PACS2Q86VP3 889 aa12.47□□□□□ -0.41
SEC22A-204ENST00000473494 TMEM134Q9H6X4 195 aa12.47□□□□□ -0.41
SEC22A-204ENST00000473494 PNMA3Q9UL41 463 aa12.47□□□□□ -0.41
SEC22A-204ENST00000473494 CD46P15529 392 aa12.46□□□□□ -0.41
SEC22A-204ENST00000473494 MYSM1Q5VVJ2 828 aa12.46□□□□□ -0.41
SEC22A-204ENST00000473494 LHX8Q68G74 356 aa12.46□□□□□ -0.41
SEC22A-204ENST00000473494 ZBED2Q9BTP6 218 aa12.46□□□□□ -0.41
SEC22A-204ENST00000473494 FLIIQ13045 1269 aa12.44□□□□□ -0.42
SEC22A-204ENST00000473494 DIXDC1Q155Q3 683 aa12.44□□□□□ -0.42
SEC22A-204ENST00000473494 SULF1Q8IWU6 871 aa12.44□□□□□ -0.42
SEC22A-204ENST00000473494 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.42□□□□□ -0.42
SEC22A-204ENST00000473494 SLC4A5Q9BY07 1137 aa12.42□□□□□ -0.42
SEC22A-204ENST00000473494 CLK2P49760 499 aaKnown RBP12.41□□□□□ -0.42
SEC22A-204ENST00000473494 VARS2Q5ST30 1063 aaKnown RBP12.41□□□□□ -0.42
SEC22A-204ENST00000473494 POTEEQ6S8J3 1075 aa12.41□□□□□ -0.42
SEC22A-204ENST00000473494 TBC1D2Q9BYX2 928 aa12.41□□□□□ -0.42
SEC22A-204ENST00000473494 ERBB3P21860 1342 aa12.4□□□□□ -0.42
SEC22A-204ENST00000473494 PSEN2P49810 448 aa12.4□□□□□ -0.42
SEC22A-204ENST00000473494 ARHGAP33O14559 1287 aa12.39□□□□□ -0.43
SEC22A-204ENST00000473494 ST18O60284 1047 aa12.39□□□□□ -0.43
SEC22A-204ENST00000473494 PBX2P40425 430 aa12.39□□□□□ -0.43
SEC22A-204ENST00000473494 ZMYND15Q9H091 742 aa12.39□□□□□ -0.43
SEC22A-204ENST00000473494 SMAPO00193 183 aa12.38□□□□□ -0.43
SEC22A-204ENST00000473494 KIAA1468Q9P260 1216 aa12.38□□□□□ -0.43
SEC22A-204ENST00000473494 RABGEF1Q9UJ41 708 aa12.38□□□□□ -0.43
SEC22A-204ENST00000473494 PROCA1Q8NCQ7 364 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms