RNA–Protein interactions for RNA: ENST00000473470.1

CNOT4-209, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 707 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-209ENST00000473470 LSM11P83369 360 aaKnown RBP eCLIP10.94□□□□□ -0.66
CNOT4-209ENST00000473470 KRTAP3-3Q9BYR6 98 aa10.94□□□□□ -0.66
CNOT4-209ENST00000473470 KRTAP3-2Q9BYR7 98 aa10.94□□□□□ -0.66
CNOT4-209ENST00000473470 OSBPP22059 807 aa10.93□□□□□ -0.66
CNOT4-209ENST00000473470 CERKQ8TCT0 537 aa10.93□□□□□ -0.66
CNOT4-209ENST00000473470 RBM33Q96EV2 1170 aaKnown RBP10.92□□□□□ -0.66
CNOT4-209ENST00000473470 TK2O00142 265 aa10.91□□□□□ -0.66
CNOT4-209ENST00000473470 C6orf132Q5T0Z8 1188 aa10.91□□□□□ -0.66
CNOT4-209ENST00000473470 POTEEQ6S8J3 1075 aa10.9□□□□□ -0.66
CNOT4-209ENST00000473470 SLC4A5Q9BY07 1137 aa10.9□□□□□ -0.66
CNOT4-209ENST00000473470 PSEN2P49810 448 aa10.89□□□□□ -0.67
CNOT4-209ENST00000473470 AXIN2Q9Y2T1 843 aa10.89□□□□□ -0.67
CNOT4-209ENST00000473470 RBM27Q9P2N5 1060 aaKnown RBP10.87□□□□□ -0.67
CNOT4-209ENST00000473470 TSR1Q2NL82 804 aaKnown RBP10.86□□□□□ -0.67
CNOT4-209ENST00000473470 BCANQ96GW7 911 aa10.86□□□□□ -0.67
CNOT4-209ENST00000473470 ADGRD1Q6QNK2 874 aa10.85□□□□□ -0.67
CNOT4-209ENST00000473470 ZBED2Q9BTP6 218 aa10.85□□□□□ -0.67
CNOT4-209ENST00000473470 PRIM1P49642 420 aaKnown RBP10.84□□□□□ -0.67
CNOT4-209ENST00000473470 DMRTA1Q5VZB9 504 aa10.84□□□□□ -0.67
CNOT4-209ENST00000473470 ANKRD13DQ6ZTN6 518 aa10.83□□□□□ -0.68
CNOT4-209ENST00000473470 NBPF3Q9H094 633 aa10.83□□□□□ -0.68
CNOT4-209ENST00000473470 CDHR5Q9HBB8 845 aa10.83□□□□□ -0.68
CNOT4-209ENST00000473470 ONECUT3O60422 494 aaPredicted RBP10.82□□□□□ -0.68
CNOT4-209ENST00000473470 COL9A1P20849 921 aa10.82□□□□□ -0.68
CNOT4-209ENST00000473470 NUTM2FA1L443 756 aa10.81□□□□□ -0.68
CNOT4-209ENST00000473470 GPIHBP1Q8IV16 184 aa10.81□□□□□ -0.68
CNOT4-209ENST00000473470 VPS9D1Q9Y2B5 631 aa10.81□□□□□ -0.68
CNOT4-209ENST00000473470 TRIM6-TRIM34B2RNG4 842 aa10.8□□□□□ -0.68
CNOT4-209ENST00000473470 FCHSD2O94868 740 aa10.8□□□□□ -0.68
CNOT4-209ENST00000473470 RABGEF1Q9UJ41 708 aa10.79□□□□□ -0.68
CNOT4-209ENST00000473470 PTGDRQ13258 359 aa10.78□□□□□ -0.68
CNOT4-209ENST00000473470 RBM26Q5T8P6 1007 aaKnown RBP10.78□□□□□ -0.68
CNOT4-209ENST00000473470 STAC3Q96MF2 364 aa10.78□□□□□ -0.68
CNOT4-209ENST00000473470 NBPF26B4DH59 902 aa10.77□□□□□ -0.69
CNOT4-209ENST00000473470 PRSS12P56730 875 aa10.77□□□□□ -0.69
CNOT4-209ENST00000473470 HIC1Q14526 733 aa10.77□□□□□ -0.69
CNOT4-209ENST00000473470 CDCA7LQ96GN5 454 aa10.77□□□□□ -0.69
CNOT4-209ENST00000473470 PROX2Q3B8N5 592 aa10.76□□□□□ -0.69
CNOT4-209ENST00000473470 LMOD2Q6P5Q4 547 aa10.76□□□□□ -0.69
CNOT4-209ENST00000473470 HRO43593 1189 aa10.75□□□□□ -0.69
CNOT4-209ENST00000473470 PACS2Q86VP3 889 aa10.75□□□□□ -0.69
CNOT4-209ENST00000473470 SPNS2Q8IVW8 549 aa10.74□□□□□ -0.69
CNOT4-209ENST00000473470 LAPTM4BQ86VI4 370 aa10.73□□□□□ -0.69
CNOT4-209ENST00000473470 MRPL50Q8N5N7 158 aaKnown RBP10.73□□□□□ -0.69
CNOT4-209ENST00000473470 NPDC1Q9NQX5 325 aaPredicted RBP10.73□□□□□ -0.69
CNOT4-209ENST00000473470 PADI6Q6TGC4 694 aa10.72□□□□□ -0.69
CNOT4-209ENST00000473470 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.72□□□□□ -0.69
CNOT4-209ENST00000473470 MYT1LQ9UL68 1186 aa10.72□□□□□ -0.69
CNOT4-209ENST00000473470 GNPATO15228 680 aa10.71□□□□□ -0.69
CNOT4-209ENST00000473470 GPR37O15354 613 aa10.71□□□□□ -0.69
CNOT4-209ENST00000473470 TSKSQ9UJT2 592 aa10.71□□□□□ -0.69
CNOT4-209ENST00000473470 BHMG1C9JSJ3 638 aaPredicted RBP10.7□□□□□ -0.7
CNOT4-209ENST00000473470 TTC13Q8NBP0 860 aa10.7□□□□□ -0.7
CNOT4-209ENST00000473470 KIAA1468Q9P260 1216 aa10.7□□□□□ -0.7
CNOT4-209ENST00000473470 GOLGA8CPA6NN73 597 aa10.68□□□□□ -0.7
CNOT4-209ENST00000473470 FAM98CQ17RN3 349 aaKnown RBP10.68□□□□□ -0.7
CNOT4-209ENST00000473470 RNF166Q96A37 237 aaPredicted RBP10.68□□□□□ -0.7
CNOT4-209ENST00000473470 PNMA3Q9UL41 463 aa10.66□□□□□ -0.7
CNOT4-209ENST00000473470 MMRN1Q13201 1228 aa10.65□□□□□ -0.7
CNOT4-209ENST00000473470 ANKK1Q8NFD2 765 aa10.64□□□□□ -0.71
CNOT4-209ENST00000473470 RBM46Q8TBY0 533 aaKnown RBP10.64□□□□□ -0.71
CNOT4-209ENST00000473470 TATDN2Q93075 761 aa10.64□□□□□ -0.71
CNOT4-209ENST00000473470 FAM198AQ9UFP1 575 aa10.64□□□□□ -0.71
CNOT4-209ENST00000473470 SEPT9Q9UHD8 586 aaPredicted RBP10.64□□□□□ -0.71
CNOT4-209ENST00000473470 MAP2K5Q13163 448 aa10.63□□□□□ -0.71
CNOT4-209ENST00000473470 NUDT18Q6ZVK8 323 aa10.62□□□□□ -0.71
CNOT4-209ENST00000473470 ADGRG1Q9Y653 693 aa10.62□□□□□ -0.71
CNOT4-209ENST00000473470 OATP04181 439 aa10.61□□□□□ -0.71
CNOT4-209ENST00000473470 ZFRQ96KR1 1074 aaKnown RBP10.61□□□□□ -0.71
CNOT4-209ENST00000473470 SLC4A3P48751 1232 aa10.6□□□□□ -0.71
CNOT4-209ENST00000473470 WNT2BQ93097 391 aa10.6□□□□□ -0.71
CNOT4-209ENST00000473470 PLSCR2Q9NRY7 297 aa10.6□□□□□ -0.71
CNOT4-209ENST00000473470 DNAJB2P25686 324 aa10.59□□□□□ -0.71
CNOT4-209ENST00000473470 NECTIN2Q92692 538 aa10.59□□□□□ -0.71
CNOT4-209ENST00000473470 KCTD12Q96CX2 325 aaKnown RBP10.58□□□□□ -0.72
CNOT4-209ENST00000473470 LRCH3Q96II8 777 aa10.58□□□□□ -0.72
CNOT4-209ENST00000473470 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.57□□□□□ -0.72
CNOT4-209ENST00000473470 HDGFP51858 240 aaKnown RBP10.57□□□□□ -0.72
CNOT4-209ENST00000473470 ZC3H15Q8WU90 426 aaKnown RBP10.57□□□□□ -0.72
CNOT4-209ENST00000473470 MINK1Q8N4C8 1332 aaPredicted RBP10.57□□□□□ -0.72
CNOT4-209ENST00000473470 SMAPO00193 183 aa10.56□□□□□ -0.72
CNOT4-209ENST00000473470 THSD4Q6ZMP0 1018 aa10.56□□□□□ -0.72
CNOT4-209ENST00000473470 METTL3Q86U44 580 aaKnown RBP10.56□□□□□ -0.72
CNOT4-209ENST00000473470 EYA1Q99502 592 aa10.56□□□□□ -0.72
CNOT4-209ENST00000473470 PXYLP1Q8TE99 480 aa10.55□□□□□ -0.72
CNOT4-209ENST00000473470 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.55□□□□□ -0.72
CNOT4-209ENST00000473470 SOWAHBA6NEL2 793 aa10.54□□□□□ -0.72
CNOT4-209ENST00000473470 ZMYND10O75800 440 aa10.54□□□□□ -0.72
CNOT4-209ENST00000473470 FECHP22830 423 aa10.54□□□□□ -0.72
CNOT4-209ENST00000473470 BARGINQ6ZT62 677 aa10.54□□□□□ -0.72
CNOT4-209ENST00000473470 HCSTQ9UBK5 93 aa10.54□□□□□ -0.72
CNOT4-209ENST00000473470 NYAP1Q6ZVC0 841 aa10.53□□□□□ -0.72
CNOT4-209ENST00000473470 SLF2Q8IX21 1173 aa10.53□□□□□ -0.72
CNOT4-209ENST00000473470 C3orf80F5H4A9 247 aa10.52□□□□□ -0.73
CNOT4-209ENST00000473470 CCDC102AQ96A19 550 aa10.52□□□□□ -0.73
CNOT4-209ENST00000473470 TMEM134Q9H6X4 195 aa10.52□□□□□ -0.73
CNOT4-209ENST00000473470 RCCD1A6NED2 376 aa10.51□□□□□ -0.73
CNOT4-209ENST00000473470 IRF6O14896 467 aa10.51□□□□□ -0.73
CNOT4-209ENST00000473470 SAMD7Q7Z3H4 446 aa10.51□□□□□ -0.73
CNOT4-209ENST00000473470 KRI1Q8N9T8 703 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms