RNA–Protein interactions for RNA: ENST00000473460.1

GINS1-202, Transcript of GINS complex subunit 1, humanhuman

TSL 2

Gene GINS1, Length 541 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS1-202ENST00000473460 RTN4Q9NQC3 1192 aaKnown RBP10.5□□□□□ -0.73
GINS1-202ENST00000473460 SPRYD3Q8NCJ5 442 aa10.49□□□□□ -0.73
GINS1-202ENST00000473460 NBPF3Q9H094 633 aa10.49□□□□□ -0.73
GINS1-202ENST00000473460 RABGEF1Q9UJ41 708 aa10.48□□□□□ -0.73
GINS1-202ENST00000473460 GOLGA8CPA6NN73 597 aa10.47□□□□□ -0.73
GINS1-202ENST00000473460 C6orf132Q5T0Z8 1188 aa10.47□□□□□ -0.73
GINS1-202ENST00000473460 EPAS1Q99814 870 aa10.47□□□□□ -0.73
GINS1-202ENST00000473460 DDX12PQ92771 950 aa10.46□□□□□ -0.73
GINS1-202ENST00000473460 PDIA6Q15084 440 aa10.44□□□□□ -0.74
GINS1-202ENST00000473460 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.44□□□□□ -0.74
GINS1-202ENST00000473460 RBM33Q96EV2 1170 aaKnown RBP10.43□□□□□ -0.74
GINS1-202ENST00000473460 KIAA1468Q9P260 1216 aa10.42□□□□□ -0.74
GINS1-202ENST00000473460 ONECUT3O60422 494 aaPredicted RBP10.41□□□□□ -0.74
GINS1-202ENST00000473460 PAXIP1Q6ZW49 1069 aaPredicted RBP10.41□□□□□ -0.74
GINS1-202ENST00000473460 IFFO2Q5TF58 517 aa10.4□□□□□ -0.74
GINS1-202ENST00000473460 CFAP44Q96MT7 982 aa10.4□□□□□ -0.74
GINS1-202ENST00000473460 TRIM6-TRIM34B2RNG4 842 aa10.39□□□□□ -0.75
GINS1-202ENST00000473460 EN1Q05925 392 aaPredicted RBP10.39□□□□□ -0.75
GINS1-202ENST00000473460 NBR1Q14596 966 aa10.39□□□□□ -0.75
GINS1-202ENST00000473460 TSR1Q2NL82 804 aaKnown RBP10.39□□□□□ -0.75
GINS1-202ENST00000473460 LAPTM4BQ86VI4 370 aa10.39□□□□□ -0.75
GINS1-202ENST00000473460 BCAMP50895 628 aa10.38□□□□□ -0.75
GINS1-202ENST00000473460 E2F4Q16254 413 aa10.38□□□□□ -0.75
GINS1-202ENST00000473460 ANKK1Q8NFD2 765 aa10.38□□□□□ -0.75
GINS1-202ENST00000473460 SEPT9Q9UHD8 586 aaPredicted RBP10.38□□□□□ -0.75
GINS1-202ENST00000473460 PRIM1P49642 420 aaKnown RBP10.37□□□□□ -0.75
GINS1-202ENST00000473460 ZFRQ96KR1 1074 aaKnown RBP10.37□□□□□ -0.75
GINS1-202ENST00000473460 ARIH1Q9Y4X5 557 aaPredicted RBP10.37□□□□□ -0.75
GINS1-202ENST00000473460 SOWAHBA6NEL2 793 aa10.36□□□□□ -0.75
GINS1-202ENST00000473460 SPDYE16A6NNV3 312 aaPredicted RBP10.36□□□□□ -0.75
GINS1-202ENST00000473460 MAP3K7O43318 606 aa10.34□□□□□ -0.75
GINS1-202ENST00000473460 TSKSQ9UJT2 592 aa10.34□□□□□ -0.75
GINS1-202ENST00000473460 A0A0G2JS52 829 aa10.32□□□□□ -0.76
GINS1-202ENST00000473460 FAM98CQ17RN3 349 aaKnown RBP10.31□□□□□ -0.76
GINS1-202ENST00000473460 WDR70Q9NW82 654 aa10.3□□□□□ -0.76
GINS1-202ENST00000473460 WBP1LQ9NX94 342 aa10.3□□□□□ -0.76
GINS1-202ENST00000473460 FAM198AQ9UFP1 575 aa10.3□□□□□ -0.76
GINS1-202ENST00000473460 GRXCR2A6NFK2 248 aa10.29□□□□□ -0.76
GINS1-202ENST00000473460 ITGBL1O95965 494 aaPredicted RBP10.29□□□□□ -0.76
GINS1-202ENST00000473460 C3orf80F5H4A9 247 aa10.27□□□□□ -0.77
GINS1-202ENST00000473460 OSBPP22059 807 aa10.27□□□□□ -0.77
GINS1-202ENST00000473460 CDCA7LQ96GN5 454 aa10.27□□□□□ -0.77
GINS1-202ENST00000473460 CDHR5Q9HBB8 845 aa10.26□□□□□ -0.77
GINS1-202ENST00000473460 RGS20O76081 388 aa10.25□□□□□ -0.77
GINS1-202ENST00000473460 PRSS12P56730 875 aa10.25□□□□□ -0.77
GINS1-202ENST00000473460 NYAP1Q6ZVC0 841 aa10.25□□□□□ -0.77
GINS1-202ENST00000473460 PACS2Q86VP3 889 aa10.25□□□□□ -0.77
GINS1-202ENST00000473460 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.25□□□□□ -0.77
GINS1-202ENST00000473460 SMAPO00193 183 aa10.24□□□□□ -0.77
GINS1-202ENST00000473460 HPS5Q9UPZ3 1129 aa10.24□□□□□ -0.77
GINS1-202ENST00000473460 CERKQ8TCT0 537 aa10.23□□□□□ -0.77
GINS1-202ENST00000473460 LRCH3Q96II8 777 aa10.23□□□□□ -0.77
GINS1-202ENST00000473460 TSR3Q9UJK0 312 aaKnown RBP10.23□□□□□ -0.77
GINS1-202ENST00000473460 TATDN2Q93075 761 aa10.2□□□□□ -0.78
GINS1-202ENST00000473460 SAMD7Q7Z3H4 446 aa10.19□□□□□ -0.78
GINS1-202ENST00000473460 TSHZ2Q9NRE2 1034 aa10.19□□□□□ -0.78
GINS1-202ENST00000473460 NPDC1Q9NQX5 325 aaPredicted RBP10.18□□□□□ -0.78
GINS1-202ENST00000473460 PNMA3Q9UL41 463 aa10.18□□□□□ -0.78
GINS1-202ENST00000473460 KCNC4Q03721 635 aa10.17□□□□□ -0.78
GINS1-202ENST00000473460 TTC13Q8NBP0 860 aa10.17□□□□□ -0.78
GINS1-202ENST00000473460 RBM27Q9P2N5 1060 aaKnown RBP10.17□□□□□ -0.78
GINS1-202ENST00000473460 NBPF26B4DH59 902 aa10.16□□□□□ -0.78
GINS1-202ENST00000473460 PPP4CP60510 307 aa10.15□□□□□ -0.78
GINS1-202ENST00000473460 NUDT18Q6ZVK8 323 aa10.15□□□□□ -0.78
GINS1-202ENST00000473460 MLLT3P42568 568 aaPredicted RBP10.13□□□□□ -0.79
GINS1-202ENST00000473460 PADI6Q6TGC4 694 aa10.13□□□□□ -0.79
GINS1-202ENST00000473460 KCNV2Q8TDN2 545 aa10.13□□□□□ -0.79
GINS1-202ENST00000473460 ARHGEF1Q92888 912 aaKnown RBP10.12□□□□□ -0.79
GINS1-202ENST00000473460 IRX2Q9BZI1 471 aaPredicted RBP10.12□□□□□ -0.79
GINS1-202ENST00000473460 TJAP1Q5JTD0 557 aa10.11□□□□□ -0.79
GINS1-202ENST00000473460 APLP1P51693 650 aa10.06□□□□□ -0.8
GINS1-202ENST00000473460 SWT1Q5T5J6 900 aaKnown RBP10.06□□□□□ -0.8
GINS1-202ENST00000473460 EYA1Q99502 592 aa10.06□□□□□ -0.8
GINS1-202ENST00000473460 MTRQ99707 1265 aa10.06□□□□□ -0.8
GINS1-202ENST00000473460 RNF40O75150 1001 aa10.04□□□□□ -0.8
GINS1-202ENST00000473460 PTGDRQ13258 359 aa10.03□□□□□ -0.8
GINS1-202ENST00000473460 IL21Q9HBE4 155 aa10.03□□□□□ -0.8
GINS1-202ENST00000473460 ZNF516Q92618 1163 aa10.02□□□□□ -0.81
GINS1-202ENST00000473460 HDGFP51858 240 aaKnown RBP10.01□□□□□ -0.81
GINS1-202ENST00000473460 SLF2Q8IX21 1173 aa9.99□□□□□ -0.81
GINS1-202ENST00000473460 PPP1R18Q6NYC8 613 aa9.98□□□□□ -0.81
GINS1-202ENST00000473460 NKX2-3Q8TAU0 364 aa9.97□□□□□ -0.81
GINS1-202ENST00000473460 SEMA3EO15041 775 aa9.96□□□□□ -0.82
GINS1-202ENST00000473460 ADGRG1Q9Y653 693 aa9.96□□□□□ -0.82
GINS1-202ENST00000473460 COPS2P61201 443 aa9.94□□□□□ -0.82
GINS1-202ENST00000473460 FAM161AQ3B820 660 aa9.94□□□□□ -0.82
GINS1-202ENST00000473460 P3H3Q8IVL6 736 aa9.94□□□□□ -0.82
GINS1-202ENST00000473460 NECTIN2Q92692 538 aa9.94□□□□□ -0.82
GINS1-202ENST00000473460 NUTM2FA1L443 756 aa9.93□□□□□ -0.82
GINS1-202ENST00000473460 DNAJB2P25686 324 aa9.93□□□□□ -0.82
GINS1-202ENST00000473460 PRKD2Q9BZL6 878 aa9.93□□□□□ -0.82
GINS1-202ENST00000473460 TMEM134Q9H6X4 195 aa9.93□□□□□ -0.82
GINS1-202ENST00000473460 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.93□□□□□ -0.82
GINS1-202ENST00000473460 Q6ZNB5 142 aa9.91□□□□□ -0.82
GINS1-202ENST00000473460 RBM46Q8TBY0 533 aaKnown RBP9.91□□□□□ -0.82
GINS1-202ENST00000473460 RCCD1A6NED2 376 aa9.9□□□□□ -0.82
GINS1-202ENST00000473460 LCE2BO14633 110 aa9.9□□□□□ -0.82
GINS1-202ENST00000473460 ZPR1O75312 459 aa9.89□□□□□ -0.83
GINS1-202ENST00000473460 FCHSD2O94868 740 aa9.88□□□□□ -0.83
GINS1-202ENST00000473460 SLC4A3P48751 1232 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms