RNA–Protein interactions for RNA: ENST00000473333.1

GTF2I-206, Transcript of general transcription factor IIi, humanhuman

TSL 3

Gene GTF2I, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-206ENST00000473333 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.38□□□□□ -0.27
GTF2I-206ENST00000473333 MRPL50Q8N5N7 158 aaKnown RBP13.37□□□□□ -0.27
GTF2I-206ENST00000473333 PROX2Q3B8N5 592 aa13.36□□□□□ -0.27
GTF2I-206ENST00000473333 FBXW7Q969H0 707 aa13.36□□□□□ -0.27
GTF2I-206ENST00000473333 GOLGA8CPA6NN73 597 aa13.35□□□□□ -0.27
GTF2I-206ENST00000473333 PPP1R3GB7ZBB8 358 aa13.35□□□□□ -0.27
GTF2I-206ENST00000473333 CFAP44Q96MT7 982 aa13.34□□□□□ -0.27
GTF2I-206ENST00000473333 THSD4Q6ZMP0 1018 aa13.33□□□□□ -0.28
GTF2I-206ENST00000473333 PAXIP1Q6ZW49 1069 aaPredicted RBP13.33□□□□□ -0.28
GTF2I-206ENST00000473333 DDX12PQ92771 950 aa13.33□□□□□ -0.28
GTF2I-206ENST00000473333 WNT2BQ93097 391 aa13.33□□□□□ -0.28
GTF2I-206ENST00000473333 RBM33Q96EV2 1170 aaKnown RBP13.31□□□□□ -0.28
GTF2I-206ENST00000473333 C6orf132Q5T0Z8 1188 aa13.3□□□□□ -0.28
GTF2I-206ENST00000473333 EPAS1Q99814 870 aa13.3□□□□□ -0.28
GTF2I-206ENST00000473333 NBPF3Q9H094 633 aa13.3□□□□□ -0.28
GTF2I-206ENST00000473333 NACADO15069 1562 aa13.29□□□□□ -0.28
GTF2I-206ENST00000473333 RABGEF1Q9UJ41 708 aa13.29□□□□□ -0.28
GTF2I-206ENST00000473333 KIAA1468Q9P260 1216 aa13.26□□□□□ -0.29
GTF2I-206ENST00000473333 PDIA6Q15084 440 aa13.23□□□□□ -0.29
GTF2I-206ENST00000473333 E2F4Q16254 413 aa13.22□□□□□ -0.29
GTF2I-206ENST00000473333 NBR1Q14596 966 aa13.21□□□□□ -0.29
GTF2I-206ENST00000473333 TSR1Q2NL82 804 aaKnown RBP13.2□□□□□ -0.3
GTF2I-206ENST00000473333 UNC13AQ9UPW8 1703 aa13.19□□□□□ -0.3
GTF2I-206ENST00000473333 WDR70Q9NW82 654 aa13.19□□□□□ -0.3
GTF2I-206ENST00000473333 SEPT9Q9UHD8 586 aaPredicted RBP13.19□□□□□ -0.3
GTF2I-206ENST00000473333 SPDYE16A6NNV3 312 aaPredicted RBP13.18□□□□□ -0.3
GTF2I-206ENST00000473333 BCAMP50895 628 aa13.18□□□□□ -0.3
GTF2I-206ENST00000473333 EN1Q05925 392 aaPredicted RBP13.18□□□□□ -0.3
GTF2I-206ENST00000473333 ANKK1Q8NFD2 765 aa13.18□□□□□ -0.3
GTF2I-206ENST00000473333 TRIM6-TRIM34B2RNG4 842 aa13.17□□□□□ -0.3
GTF2I-206ENST00000473333 MAP3K7O43318 606 aa13.17□□□□□ -0.3
GTF2I-206ENST00000473333 ONECUT3O60422 494 aaPredicted RBP13.16□□□□□ -0.3
GTF2I-206ENST00000473333 LAPTM4BQ86VI4 370 aa13.16□□□□□ -0.3
GTF2I-206ENST00000473333 ZFRQ96KR1 1074 aaKnown RBP13.16□□□□□ -0.3
GTF2I-206ENST00000473333 PRIM1P49642 420 aaKnown RBP13.15□□□□□ -0.3
GTF2I-206ENST00000473333 GRXCR2A6NFK2 248 aa13.13□□□□□ -0.31
GTF2I-206ENST00000473333 ARIH1Q9Y4X5 557 aaPredicted RBP13.13□□□□□ -0.31
GTF2I-206ENST00000473333 SOWAHBA6NEL2 793 aa13.12□□□□□ -0.31
GTF2I-206ENST00000473333 TSKSQ9UJT2 592 aa13.12□□□□□ -0.31
GTF2I-206ENST00000473333 IFFO2Q5TF58 517 aa13.09□□□□□ -0.31
GTF2I-206ENST00000473333 FAM98CQ17RN3 349 aaKnown RBP13.08□□□□□ -0.32
GTF2I-206ENST00000473333 WBP1LQ9NX94 342 aa13.08□□□□□ -0.32
GTF2I-206ENST00000473333 MYO15BQ96JP2 1530 aa13.08□□□□□ -0.32
GTF2I-206ENST00000473333 PACS2Q86VP3 889 aa13.06□□□□□ -0.32
GTF2I-206ENST00000473333 TSHZ2Q9NRE2 1034 aa13.06□□□□□ -0.32
GTF2I-206ENST00000473333 FAM198AQ9UFP1 575 aa13.06□□□□□ -0.32
GTF2I-206ENST00000473333 BICRAQ9NZM4 1560 aa13.06□□□□□ -0.32
GTF2I-206ENST00000473333 OSBPP22059 807 aa13.05□□□□□ -0.32
GTF2I-206ENST00000473333 CDCA7LQ96GN5 454 aa13.05□□□□□ -0.32
GTF2I-206ENST00000473333 SMAPO00193 183 aa13.04□□□□□ -0.32
GTF2I-206ENST00000473333 A0A0G2JS52 829 aa13.03□□□□□ -0.32
GTF2I-206ENST00000473333 C3orf80F5H4A9 247 aa13.03□□□□□ -0.32
GTF2I-206ENST00000473333 PRSS12P56730 875 aa13.03□□□□□ -0.32
GTF2I-206ENST00000473333 CDHR5Q9HBB8 845 aa13.03□□□□□ -0.32
GTF2I-206ENST00000473333 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.03□□□□□ -0.32
GTF2I-206ENST00000473333 LRCH3Q96II8 777 aa13.01□□□□□ -0.33
GTF2I-206ENST00000473333 HPS5Q9UPZ3 1129 aa13□□□□□ -0.33
GTF2I-206ENST00000473333 ITGBL1O95965 494 aaPredicted RBP12.99□□□□□ -0.33
GTF2I-206ENST00000473333 TSR3Q9UJK0 312 aaKnown RBP12.99□□□□□ -0.33
GTF2I-206ENST00000473333 CERKQ8TCT0 537 aa12.98□□□□□ -0.33
GTF2I-206ENST00000473333 NYAP1Q6ZVC0 841 aa12.96□□□□□ -0.33
GTF2I-206ENST00000473333 TATDN2Q93075 761 aa12.96□□□□□ -0.33
GTF2I-206ENST00000473333 PNMA3Q9UL41 463 aa12.96□□□□□ -0.33
GTF2I-206ENST00000473333 SAMD7Q7Z3H4 446 aa12.95□□□□□ -0.34
GTF2I-206ENST00000473333 RGS20O76081 388 aa12.93□□□□□ -0.34
GTF2I-206ENST00000473333 NPDC1Q9NQX5 325 aaPredicted RBP12.92□□□□□ -0.34
GTF2I-206ENST00000473333 NBPF26B4DH59 902 aa12.91□□□□□ -0.34
GTF2I-206ENST00000473333 PPP4CP60510 307 aa12.91□□□□□ -0.34
GTF2I-206ENST00000473333 KCNC4Q03721 635 aa12.91□□□□□ -0.34
GTF2I-206ENST00000473333 NUDT18Q6ZVK8 323 aa12.91□□□□□ -0.34
GTF2I-206ENST00000473333 ZCCHC6Q5VYS8 1495 aaKnown RBP12.91□□□□□ -0.34
GTF2I-206ENST00000473333 MLLT3P42568 568 aaPredicted RBP12.9□□□□□ -0.34
GTF2I-206ENST00000473333 KCNV2Q8TDN2 545 aa12.9□□□□□ -0.34
GTF2I-206ENST00000473333 ARHGEF1Q92888 912 aaKnown RBP12.89□□□□□ -0.35
GTF2I-206ENST00000473333 PADI6Q6TGC4 694 aa12.88□□□□□ -0.35
GTF2I-206ENST00000473333 DCAF1Q9Y4B6 1507 aa12.87□□□□□ -0.35
GTF2I-206ENST00000473333 SHROOM4Q9ULL8 1493 aa12.86□□□□□ -0.35
GTF2I-206ENST00000473333 RBM27Q9P2N5 1060 aaKnown RBP12.86□□□□□ -0.35
GTF2I-206ENST00000473333 TTC13Q8NBP0 860 aa12.85□□□□□ -0.35
GTF2I-206ENST00000473333 RNF40O75150 1001 aa12.82□□□□□ -0.36
GTF2I-206ENST00000473333 HDGFP51858 240 aaKnown RBP12.81□□□□□ -0.36
GTF2I-206ENST00000473333 TJAP1Q5JTD0 557 aa12.81□□□□□ -0.36
GTF2I-206ENST00000473333 IRX2Q9BZI1 471 aaPredicted RBP12.81□□□□□ -0.36
GTF2I-206ENST00000473333 SCRIBQ14160 1630 aa12.79□□□□□ -0.36
GTF2I-206ENST00000473333 CC2D2AQ9P2K1 1620 aa12.79□□□□□ -0.36
GTF2I-206ENST00000473333 SWT1Q5T5J6 900 aaKnown RBP12.78□□□□□ -0.36
GTF2I-206ENST00000473333 APLP1P51693 650 aa12.77□□□□□ -0.37
GTF2I-206ENST00000473333 MTRQ99707 1265 aa12.77□□□□□ -0.37
GTF2I-206ENST00000473333 EYA1Q99502 592 aa12.76□□□□□ -0.37
GTF2I-206ENST00000473333 PTGDRQ13258 359 aa12.74□□□□□ -0.37
GTF2I-206ENST00000473333 ZNF516Q92618 1163 aa12.74□□□□□ -0.37
GTF2I-206ENST00000473333 CECR2Q9BXF3 1484 aa12.73□□□□□ -0.37
GTF2I-206ENST00000473333 IL21Q9HBE4 155 aa12.73□□□□□ -0.37
GTF2I-206ENST00000473333 EIF4G1Q04637 1599 aaKnown RBP12.73□□□□□ -0.37
GTF2I-206ENST00000473333 NUTM2FA1L443 756 aa12.71□□□□□ -0.37
GTF2I-206ENST00000473333 SEMA3EO15041 775 aa12.71□□□□□ -0.37
GTF2I-206ENST00000473333 FAM161AQ3B820 660 aa12.69□□□□□ -0.38
GTF2I-206ENST00000473333 SLF2Q8IX21 1173 aa12.69□□□□□ -0.38
GTF2I-206ENST00000473333 P3H3Q8IVL6 736 aa12.67□□□□□ -0.38
GTF2I-206ENST00000473333 NKX2-3Q8TAU0 364 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms