RNA–Protein interactions for RNA: ENST00000472947.5

NMD3-206, Transcript of NMD3 ribosome export adaptor, humanhuman

TSL 1 (best) BASIC

Gene NMD3, Length 2,378 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NMD3-206ENST00000472947 ABCA9Q8IUA7 1624 aa15.32■□□□□ 0.04
NMD3-206ENST00000472947 USP47Q96K76 1375 aa15.31■□□□□ 0.04
NMD3-206ENST00000472947 ADGRL1O94910 1474 aa15.3■□□□□ 0.04
NMD3-206ENST00000472947 CCDC144AA2RUR9 1427 aa15.3■□□□□ 0.04
NMD3-206ENST00000472947 ZFYVE16Q7Z3T8 1539 aa15.3■□□□□ 0.04
NMD3-206ENST00000472947 CARD11Q9BXL7 1154 aa15.29■□□□□ 0.04
NMD3-206ENST00000472947 CCDC184Q52MB2 194 aa15.29■□□□□ 0.04
NMD3-206ENST00000472947 BCORL1Q5H9F3 1711 aa15.28■□□□□ 0.04
NMD3-206ENST00000472947 ERBINQ96RT1 1412 aa15.28■□□□□ 0.04
NMD3-206ENST00000472947 IQGAP3Q86VI3 1631 aa15.28■□□□□ 0.04
NMD3-206ENST00000472947 KIF3BO15066 747 aa15.28■□□□□ 0.04
NMD3-206ENST00000472947 CYB5RLQ6IPT4 315 aa15.28■□□□□ 0.04
NMD3-206ENST00000472947 NBPF1Q3BBV0 1214 aa15.27■□□□□ 0.04
NMD3-206ENST00000472947 CCER2I3L3R5 266 aa15.26■□□□□ 0.03
NMD3-206ENST00000472947 ARAP3Q8WWN8 1544 aa15.26■□□□□ 0.03
NMD3-206ENST00000472947 CNTLNQ9NXG0 1405 aa15.26■□□□□ 0.03
NMD3-206ENST00000472947 ST20-MTHFSA0A0A6YYL1 179 aa15.25■□□□□ 0.03
NMD3-206ENST00000472947 ATP7AQ04656 1500 aa15.25■□□□□ 0.03
NMD3-206ENST00000472947 UHRF1BP1Q6BDS2 1440 aa15.25■□□□□ 0.03
NMD3-206ENST00000472947 KDM5CP41229 1560 aa15.24■□□□□ 0.03
NMD3-206ENST00000472947 MAGI2Q86UL8 1455 aa15.24■□□□□ 0.03
NMD3-206ENST00000472947 CD109Q6YHK3 1445 aa15.24■□□□□ 0.03
NMD3-206ENST00000472947 RTEL1-TNFRSF6BF6WH68 1400 aa15.23■□□□□ 0.03
NMD3-206ENST00000472947 A2MP01023 1474 aa15.23■□□□□ 0.03
NMD3-206ENST00000472947 RALGAPBQ86X10 1494 aa15.23■□□□□ 0.03
NMD3-206ENST00000472947 ROCK2O75116 1388 aaKnown RBP15.22■□□□□ 0.03
NMD3-206ENST00000472947 INO80Q9ULG1 1556 aaPredicted RBP15.22■□□□□ 0.03
NMD3-206ENST00000472947 E9PCH4 1651 aa15.21■□□□□ 0.03
NMD3-206ENST00000472947 RAPGEF3O95398 923 aa15.21■□□□□ 0.03
NMD3-206ENST00000472947 PRAG1Q86YV5 1406 aa15.2■□□□□ 0.02
NMD3-206ENST00000472947 PRKRIP1Q9H875 184 aaPredicted RBP15.19■□□□□ 0.02
NMD3-206ENST00000472947 KIDINS220Q9ULH0 1771 aa15.19■□□□□ 0.02
NMD3-206ENST00000472947 POLR1AO95602 1720 aaPredicted RBP15.18■□□□□ 0.02
NMD3-206ENST00000472947 DHX29Q7Z478 1369 aaKnown RBP15.17■□□□□ 0.02
NMD3-206ENST00000472947 ATP10AO60312 1499 aa15.17■□□□□ 0.02
NMD3-206ENST00000472947 CFAP65Q6ZU64 1925 aaKnown RBP15.17■□□□□ 0.02
NMD3-206ENST00000472947 TRPM1Q7Z4N2 1603 aa15.16■□□□□ 0.02
NMD3-206ENST00000472947 GGT6Q6P531 493 aa15.16■□□□□ 0.02
NMD3-206ENST00000472947 UGGT1Q9NYU2 1555 aa15.15■□□□□ 0.02
NMD3-206ENST00000472947 FAM9BQ8IZU0 186 aa15.14■□□□□ 0.01
NMD3-206ENST00000472947 DEPDC5O75140 1603 aa15.14■□□□□ 0.01
NMD3-206ENST00000472947 HNRNPUQ00839 825 aaKnown RBP eCLIP15.14■□□□□ 0.01
NMD3-206ENST00000472947 ZNF518AQ6AHZ1 1483 aa15.14■□□□□ 0.01
NMD3-206ENST00000472947 MROH1Q8NDA8 1641 aa15.13■□□□□ 0.01
NMD3-206ENST00000472947 SENP3-EIF4A1A0A087X0R7 540 aa15.13■□□□□ 0.01
NMD3-206ENST00000472947 CLTCL1P53675 1640 aa15.13■□□□□ 0.01
NMD3-206ENST00000472947 KANK1Q14678 1352 aa15.12■□□□□ 0.01
NMD3-206ENST00000472947 MRS2Q9HD23 443 aa15.12■□□□□ 0.01
NMD3-206ENST00000472947 POGZQ7Z3K3 1410 aa15.12■□□□□ 0.01
NMD3-206ENST00000472947 SPHKAPQ2M3C7 1700 aa15.11■□□□□ 0.01
NMD3-206ENST00000472947 TET3O43151 1660 aa15.1■□□□□ 0.01
NMD3-206ENST00000472947 RIMBP3CA6NJZ7 1639 aa15.1■□□□□ 0.01
NMD3-206ENST00000472947 RIMBP3BA6NNM3 1639 aa15.1■□□□□ 0.01
NMD3-206ENST00000472947 RIMBP3Q9UFD9 1639 aa15.1■□□□□ 0.01
NMD3-206ENST00000472947 SUPT16HQ9Y5B9 1047 aaKnown RBP15.1■□□□□ 0.01
NMD3-206ENST00000472947 VWDEQ8N2E2 1590 aa15.09■□□□□ 0.01
NMD3-206ENST00000472947 CEP152O94986 1710 aa15.09■□□□□ 0.01
NMD3-206ENST00000472947 TRPM2O94759 1503 aa15.09■□□□□ 0.01
NMD3-206ENST00000472947 PTPRTO14522 1441 aa15.09■□□□□ 0.01
NMD3-206ENST00000472947 FRMPD1Q5SYB0 1578 aa15.08■□□□□ 0
NMD3-206ENST00000472947 PRDM15P57071 1507 aaPredicted RBP15.08■□□□□ 0
NMD3-206ENST00000472947 CHGAP10645 457 aaKnown RBP15.07■□□□□ 0
NMD3-206ENST00000472947 FAM69CQ0P6D2 419 aa15.07■□□□□ 0
NMD3-206ENST00000472947 DISP3Q9P2K9 1392 aa15.07■□□□□ 0
NMD3-206ENST00000472947 TESK2Q96S53 571 aa15.06■□□□□ 0
NMD3-206ENST00000472947 ABCA6Q8N139 1617 aa15.06■□□□□ 0
NMD3-206ENST00000472947 PPRC1Q5VV67 1664 aaKnown RBP15.06■□□□□ 0
NMD3-206ENST00000472947 BCANQ96GW7 911 aa15.06■□□□□ 0
NMD3-206ENST00000472947 SENP3Q9H4L4 574 aaPredicted RBP15.06■□□□□ 0
NMD3-206ENST00000472947 EIF2AK4Q9P2K8 1649 aaKnown RBP15.05■□□□□ 0
NMD3-206ENST00000472947 GPRASP1Q5JY77 1395 aa15.05■□□□□ 0
NMD3-206ENST00000472947 HECW2Q9P2P5 1572 aa15.05■□□□□ -0
NMD3-206ENST00000472947 TSPOAP1O95153 1857 aa15.04■□□□□ -0
NMD3-206ENST00000472947 MLH3Q9UHC1 1453 aa15.04■□□□□ -0
NMD3-206ENST00000472947 CFAP74Q9C0B2 1584 aa15.04■□□□□ -0
NMD3-206ENST00000472947 YEATS2Q9ULM3 1422 aa15.03■□□□□ -0
NMD3-206ENST00000472947 ADGRF5Q8IZF2 1346 aa15.03■□□□□ -0
NMD3-206ENST00000472947 WASHC2CQ9Y4E1 1318 aa15.03■□□□□ -0
NMD3-206ENST00000472947 MADDQ8WXG6 1647 aa15.03■□□□□ -0
NMD3-206ENST00000472947 ARID4BQ4LE39 1312 aaPredicted RBP15.03■□□□□ -0
NMD3-206ENST00000472947 EFCAB6Q5THR3 1501 aa15.03■□□□□ -0
NMD3-206ENST00000472947 CFAP70Q5T0N1 1121 aa15.03■□□□□ -0
NMD3-206ENST00000472947 FKBP8Q14318 412 aa15.02■□□□□ -0
NMD3-206ENST00000472947 NUTM2DQ5VT03 806 aaPredicted RBP15.02■□□□□ -0
NMD3-206ENST00000472947 NEO1Q92859 1461 aa15.01□□□□□ -0.01
NMD3-206ENST00000472947 NPATQ14207 1427 aa15.01□□□□□ -0.01
NMD3-206ENST00000472947 MAP3K4Q9Y6R4 1608 aa15□□□□□ -0.01
NMD3-206ENST00000472947 MROH2AA6NES4 1674 aa15□□□□□ -0.01
NMD3-206ENST00000472947 RNF17Q9BXT8 1623 aaKnown RBP14.99□□□□□ -0.01
NMD3-206ENST00000472947 RICTORQ6R327 1708 aa14.98□□□□□ -0.01
NMD3-206ENST00000472947 CC2D1BQ5T0F9 858 aaKnown RBP14.98□□□□□ -0.01
NMD3-206ENST00000472947 PANK3Q9H999 370 aa14.98□□□□□ -0.01
NMD3-206ENST00000472947 DIP2CQ9Y2E4 1556 aa14.98□□□□□ -0.01
NMD3-206ENST00000472947 COL17A1Q9UMD9 1497 aaPredicted RBP14.97□□□□□ -0.01
NMD3-206ENST00000472947 KIF1BO60333 1816 aa14.97□□□□□ -0.01
NMD3-206ENST00000472947 IRX6P78412 446 aaPredicted RBP14.97□□□□□ -0.01
NMD3-206ENST00000472947 TMF1P82094 1093 aa14.96□□□□□ -0.01
NMD3-206ENST00000472947 LAMC1P11047 1609 aa14.96□□□□□ -0.02
NMD3-206ENST00000472947 PER1O15534 1290 aaPredicted RBP14.96□□□□□ -0.02
NMD3-206ENST00000472947 ABCC3O15438 1527 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms