RNA–Protein interactions for RNA: ENST00000472673.5

COMMD3-211, Transcript of COMM domain containing 3, humanhuman

TSL 3

Gene COMMD3, Length 237 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-211ENST00000472673 RBM33Q96EV2 1170 aaKnown RBP9.7□□□□□ -0.86
COMMD3-211ENST00000472673 SEMA3EO15041 775 aa9.69□□□□□ -0.86
COMMD3-211ENST00000472673 MLLT3P42568 568 aaPredicted RBP9.69□□□□□ -0.86
COMMD3-211ENST00000472673 LSM11P83369 360 aaKnown RBP eCLIP9.69□□□□□ -0.86
COMMD3-211ENST00000472673 DMRTA1Q5VZB9 504 aa9.68□□□□□ -0.86
COMMD3-211ENST00000472673 RNF166Q96A37 237 aaPredicted RBP9.68□□□□□ -0.86
COMMD3-211ENST00000472673 MAP3K7O43318 606 aa9.67□□□□□ -0.86
COMMD3-211ENST00000472673 SLC24A1O60721 1099 aa9.67□□□□□ -0.86
COMMD3-211ENST00000472673 EN1Q05925 392 aaPredicted RBP9.66□□□□□ -0.86
COMMD3-211ENST00000472673 OSBPP22059 807 aa9.65□□□□□ -0.86
COMMD3-211ENST00000472673 PRIM1P49642 420 aaKnown RBP9.65□□□□□ -0.86
COMMD3-211ENST00000472673 C6orf132Q5T0Z8 1188 aa9.65□□□□□ -0.86
COMMD3-211ENST00000472673 MYT1LQ9UL68 1186 aa9.65□□□□□ -0.86
COMMD3-211ENST00000472673 PPP1R3GB7ZBB8 358 aa9.63□□□□□ -0.87
COMMD3-211ENST00000472673 TSR1Q2NL82 804 aaKnown RBP9.63□□□□□ -0.87
COMMD3-211ENST00000472673 COL9A1P20849 921 aa9.62□□□□□ -0.87
COMMD3-211ENST00000472673 TESPA1A2RU30 521 aaPredicted RBP9.61□□□□□ -0.87
COMMD3-211ENST00000472673 ADGRD1Q6QNK2 874 aa9.61□□□□□ -0.87
COMMD3-211ENST00000472673 TK2O00142 265 aa9.6□□□□□ -0.87
COMMD3-211ENST00000472673 ZBED2Q9BTP6 218 aa9.59□□□□□ -0.87
COMMD3-211ENST00000472673 SMYD5Q6GMV2 418 aa9.58□□□□□ -0.88
COMMD3-211ENST00000472673 CDHR5Q9HBB8 845 aa9.58□□□□□ -0.88
COMMD3-211ENST00000472673 VPS9D1Q9Y2B5 631 aa9.58□□□□□ -0.88
COMMD3-211ENST00000472673 SLC4A5Q9BY07 1137 aa9.57□□□□□ -0.88
COMMD3-211ENST00000472673 PROX2Q3B8N5 592 aa9.56□□□□□ -0.88
COMMD3-211ENST00000472673 NUTM2FA1L443 756 aa9.54□□□□□ -0.88
COMMD3-211ENST00000472673 HRO43593 1189 aa9.54□□□□□ -0.88
COMMD3-211ENST00000472673 RBM26Q5T8P6 1007 aaKnown RBP9.54□□□□□ -0.88
COMMD3-211ENST00000472673 CERKQ8TCT0 537 aa9.54□□□□□ -0.88
COMMD3-211ENST00000472673 STAC3Q96MF2 364 aa9.54□□□□□ -0.88
COMMD3-211ENST00000472673 TRIM6-TRIM34B2RNG4 842 aa9.51□□□□□ -0.89
COMMD3-211ENST00000472673 TULP1O00294 542 aaPredicted RBP9.51□□□□□ -0.89
COMMD3-211ENST00000472673 PRSS12P56730 875 aa9.51□□□□□ -0.89
COMMD3-211ENST00000472673 CDCA7LQ96GN5 454 aa9.51□□□□□ -0.89
COMMD3-211ENST00000472673 NBPF3Q9H094 633 aa9.5□□□□□ -0.89
COMMD3-211ENST00000472673 NPDC1Q9NQX5 325 aaPredicted RBP9.5□□□□□ -0.89
COMMD3-211ENST00000472673 KIAA1468Q9P260 1216 aa9.5□□□□□ -0.89
COMMD3-211ENST00000472673 RABGEF1Q9UJ41 708 aa9.5□□□□□ -0.89
COMMD3-211ENST00000472673 BHMG1C9JSJ3 638 aaPredicted RBP9.49□□□□□ -0.89
COMMD3-211ENST00000472673 ONECUT3O60422 494 aaPredicted RBP9.49□□□□□ -0.89
COMMD3-211ENST00000472673 TSKSQ9UJT2 592 aa9.49□□□□□ -0.89
COMMD3-211ENST00000472673 PTGDRQ13258 359 aa9.48□□□□□ -0.89
COMMD3-211ENST00000472673 MRPL50Q8N5N7 158 aaKnown RBP9.48□□□□□ -0.89
COMMD3-211ENST00000472673 PACS2Q86VP3 889 aa9.47□□□□□ -0.89
COMMD3-211ENST00000472673 FCHSD2O94868 740 aa9.46□□□□□ -0.9
COMMD3-211ENST00000472673 PADI6Q6TGC4 694 aa9.46□□□□□ -0.9
COMMD3-211ENST00000472673 FAM198AQ9UFP1 575 aa9.46□□□□□ -0.9
COMMD3-211ENST00000472673 GOLGA8CPA6NN73 597 aa9.45□□□□□ -0.9
COMMD3-211ENST00000472673 RBM27Q9P2N5 1060 aaKnown RBP9.45□□□□□ -0.9
COMMD3-211ENST00000472673 SEPT9Q9UHD8 586 aaPredicted RBP9.45□□□□□ -0.9
COMMD3-211ENST00000472673 GPIHBP1Q8IV16 184 aa9.44□□□□□ -0.9
COMMD3-211ENST00000472673 SMAPO00193 183 aa9.43□□□□□ -0.9
COMMD3-211ENST00000472673 NBPF26B4DH59 902 aa9.42□□□□□ -0.9
COMMD3-211ENST00000472673 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.42□□□□□ -0.9
COMMD3-211ENST00000472673 TTC13Q8NBP0 860 aa9.42□□□□□ -0.9
COMMD3-211ENST00000472673 KCTD12Q96CX2 325 aaKnown RBP9.42□□□□□ -0.9
COMMD3-211ENST00000472673 PNMA3Q9UL41 463 aa9.42□□□□□ -0.9
COMMD3-211ENST00000472673 LAPTM4BQ86VI4 370 aa9.41□□□□□ -0.9
COMMD3-211ENST00000472673 TATDN2Q93075 761 aa9.41□□□□□ -0.9
COMMD3-211ENST00000472673 C3orf80F5H4A9 247 aa9.4□□□□□ -0.9
COMMD3-211ENST00000472673 GPR37O15354 613 aa9.4□□□□□ -0.9
COMMD3-211ENST00000472673 HIC1Q14526 733 aa9.4□□□□□ -0.9
COMMD3-211ENST00000472673 FAM98CQ17RN3 349 aaKnown RBP9.4□□□□□ -0.9
COMMD3-211ENST00000472673 LMOD2Q6P5Q4 547 aa9.4□□□□□ -0.9
COMMD3-211ENST00000472673 NUDT18Q6ZVK8 323 aa9.4□□□□□ -0.9
COMMD3-211ENST00000472673 WNT2BQ93097 391 aa9.4□□□□□ -0.9
COMMD3-211ENST00000472673 GNPATO15228 680 aa9.38□□□□□ -0.91
COMMD3-211ENST00000472673 ZFRQ96KR1 1074 aaKnown RBP9.38□□□□□ -0.91
COMMD3-211ENST00000472673 ANKK1Q8NFD2 765 aa9.37□□□□□ -0.91
COMMD3-211ENST00000472673 BCANQ96GW7 911 aa9.37□□□□□ -0.91
COMMD3-211ENST00000472673 FECHP22830 423 aa9.35□□□□□ -0.91
COMMD3-211ENST00000472673 FAM161AQ3B820 660 aa9.35□□□□□ -0.91
COMMD3-211ENST00000472673 ADGRG1Q9Y653 693 aa9.35□□□□□ -0.91
COMMD3-211ENST00000472673 THSD4Q6ZMP0 1018 aa9.34□□□□□ -0.91
COMMD3-211ENST00000472673 HCSTQ9UBK5 93 aa9.34□□□□□ -0.91
COMMD3-211ENST00000472673 BCAMP50895 628 aa9.33□□□□□ -0.92
COMMD3-211ENST00000472673 PTPN5P54829 565 aa9.33□□□□□ -0.92
COMMD3-211ENST00000472673 RBM46Q8TBY0 533 aaKnown RBP9.33□□□□□ -0.92
COMMD3-211ENST00000472673 EYA1Q99502 592 aa9.33□□□□□ -0.92
COMMD3-211ENST00000472673 SAMD7Q7Z3H4 446 aa9.32□□□□□ -0.92
COMMD3-211ENST00000472673 LRCH3Q96II8 777 aa9.32□□□□□ -0.92
COMMD3-211ENST00000472673 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.32□□□□□ -0.92
COMMD3-211ENST00000472673 PLA2G2EQ9NZK7 142 aa9.32□□□□□ -0.92
COMMD3-211ENST00000472673 SOWAHBA6NEL2 793 aa9.31□□□□□ -0.92
COMMD3-211ENST00000472673 OATP04181 439 aa9.3□□□□□ -0.92
COMMD3-211ENST00000472673 HDGFP51858 240 aaKnown RBP9.29□□□□□ -0.92
COMMD3-211ENST00000472673 RCCD1A6NED2 376 aa9.28□□□□□ -0.92
COMMD3-211ENST00000472673 SWT1Q5T5J6 900 aaKnown RBP9.28□□□□□ -0.92
COMMD3-211ENST00000472673 ZC3H15Q8WU90 426 aaKnown RBP9.28□□□□□ -0.92
COMMD3-211ENST00000472673 HPS5Q9UPZ3 1129 aa9.28□□□□□ -0.92
COMMD3-211ENST00000472673 RNF40O75150 1001 aa9.27□□□□□ -0.93
COMMD3-211ENST00000472673 DNAJB2P25686 324 aa9.27□□□□□ -0.93
COMMD3-211ENST00000472673 METTL3Q86U44 580 aaKnown RBP9.27□□□□□ -0.93
COMMD3-211ENST00000472673 PXYLP1Q8TE99 480 aa9.27□□□□□ -0.93
COMMD3-211ENST00000472673 MAP2K5Q13163 448 aa9.26□□□□□ -0.93
COMMD3-211ENST00000472673 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.25□□□□□ -0.93
COMMD3-211ENST00000472673 WBP1LQ9NX94 342 aa9.25□□□□□ -0.93
COMMD3-211ENST00000472673 TSR3Q9UJK0 312 aaKnown RBP9.25□□□□□ -0.93
COMMD3-211ENST00000472673 PPP4CP60510 307 aa9.24□□□□□ -0.93
COMMD3-211ENST00000472673 TMEM134Q9H6X4 195 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms