RNA–Protein interactions for RNA: ENST00000472442.2

SCAMP4-207, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-207ENST00000472442 WASHC2AQ641Q2 1341 aa18.28■□□□□ 0.52
SCAMP4-207ENST00000472442 IQGAP3Q86VI3 1631 aa18.28■□□□□ 0.52
SCAMP4-207ENST00000472442 RTEL1-TNFRSF6BF6WH68 1400 aa18.28■□□□□ 0.52
SCAMP4-207ENST00000472442 FANCIQ9NVI1 1328 aa18.27■□□□□ 0.52
SCAMP4-207ENST00000472442 NPM1P06748 294 aaKnown RBP eCLIP18.26■□□□□ 0.51
SCAMP4-207ENST00000472442 SPATA31E1Q6ZUB1 1445 aa18.26■□□□□ 0.51
SCAMP4-207ENST00000472442 PLA2R1Q13018 1463 aa18.26■□□□□ 0.51
SCAMP4-207ENST00000472442 IRX6P78412 446 aaPredicted RBP18.25■□□□□ 0.51
SCAMP4-207ENST00000472442 C11orf95C9JLR9 678 aaPredicted RBP18.24■□□□□ 0.51
SCAMP4-207ENST00000472442 ERICH6Q7L0X2 663 aa18.24■□□□□ 0.51
SCAMP4-207ENST00000472442 ADGRL1O94910 1474 aa18.24■□□□□ 0.51
SCAMP4-207ENST00000472442 SCAPERQ9BY12 1400 aa18.24■□□□□ 0.51
SCAMP4-207ENST00000472442 UHRF1BP1Q6BDS2 1440 aa18.23■□□□□ 0.51
SCAMP4-207ENST00000472442 INO80Q9ULG1 1556 aaPredicted RBP18.22■□□□□ 0.51
SCAMP4-207ENST00000472442 HNRNPUQ00839 825 aaKnown RBP eCLIP18.21■□□□□ 0.51
SCAMP4-207ENST00000472442 ZNF326Q5BKZ1 582 aaKnown RBP18.21■□□□□ 0.51
SCAMP4-207ENST00000472442 ATP7AQ04656 1500 aa18.21■□□□□ 0.51
SCAMP4-207ENST00000472442 CCDC144AA2RUR9 1427 aa18.19■□□□□ 0.5
SCAMP4-207ENST00000472442 DCAF11Q8TEB1 546 aa18.17■□□□□ 0.5
SCAMP4-207ENST00000472442 CD109Q6YHK3 1445 aa18.17■□□□□ 0.5
SCAMP4-207ENST00000472442 CCDC7Q96M83 1385 aa18.17■□□□□ 0.5
SCAMP4-207ENST00000472442 ATP10AO60312 1499 aa18.16■□□□□ 0.5
SCAMP4-207ENST00000472442 KDM2AQ9Y2K7 1162 aa18.16■□□□□ 0.5
SCAMP4-207ENST00000472442 RALGAPBQ86X10 1494 aa18.16■□□□□ 0.5
SCAMP4-207ENST00000472442 DEPDC5O75140 1603 aa18.15■□□□□ 0.5
SCAMP4-207ENST00000472442 USP47Q96K76 1375 aa18.14■□□□□ 0.49
SCAMP4-207ENST00000472442 KDM5CP41229 1560 aa18.13■□□□□ 0.49
SCAMP4-207ENST00000472442 KIDINS220Q9ULH0 1771 aa18.13■□□□□ 0.49
SCAMP4-207ENST00000472442 KIF7Q2M1P5 1343 aa18.12■□□□□ 0.49
SCAMP4-207ENST00000472442 DHX29Q7Z478 1369 aaKnown RBP18.12■□□□□ 0.49
SCAMP4-207ENST00000472442 E9PCH4 1651 aa18.12■□□□□ 0.49
SCAMP4-207ENST00000472442 RGL3Q3MIN7 710 aa18.12■□□□□ 0.49
SCAMP4-207ENST00000472442 ZNF518AQ6AHZ1 1483 aa18.11■□□□□ 0.49
SCAMP4-207ENST00000472442 MYT1LQ9UL68 1186 aa18.11■□□□□ 0.49
SCAMP4-207ENST00000472442 CNTLNQ9NXG0 1405 aa18.11■□□□□ 0.49
SCAMP4-207ENST00000472442 POLR1AO95602 1720 aaPredicted RBP18.11■□□□□ 0.49
SCAMP4-207ENST00000472442 A2MP01023 1474 aa18.1■□□□□ 0.49
SCAMP4-207ENST00000472442 BCORL1Q5H9F3 1711 aa18.1■□□□□ 0.49
SCAMP4-207ENST00000472442 VWDEQ8N2E2 1590 aa18.1■□□□□ 0.49
SCAMP4-207ENST00000472442 KIF3BO15066 747 aa18.09■□□□□ 0.49
SCAMP4-207ENST00000472442 CYB5RLQ6IPT4 315 aa18.09■□□□□ 0.49
SCAMP4-207ENST00000472442 PRAG1Q86YV5 1406 aa18.09■□□□□ 0.49
SCAMP4-207ENST00000472442 CARD11Q9BXL7 1154 aa18.09■□□□□ 0.49
SCAMP4-207ENST00000472442 CFAP74Q9C0B2 1584 aa18.08■□□□□ 0.49
SCAMP4-207ENST00000472442 MROH1Q8NDA8 1641 aa18.08■□□□□ 0.49
SCAMP4-207ENST00000472442 POGZQ7Z3K3 1410 aa18.08■□□□□ 0.48
SCAMP4-207ENST00000472442 EIF2AK4Q9P2K8 1649 aaKnown RBP18.08■□□□□ 0.48
SCAMP4-207ENST00000472442 PRDM15P57071 1507 aaPredicted RBP18.06■□□□□ 0.48
SCAMP4-207ENST00000472442 PPP4R2Q9NY27 417 aa18.06■□□□□ 0.48
SCAMP4-207ENST00000472442 TRPM1Q7Z4N2 1603 aa18.05■□□□□ 0.48
SCAMP4-207ENST00000472442 TET3O43151 1660 aa18.05■□□□□ 0.48
SCAMP4-207ENST00000472442 PTPRTO14522 1441 aa18.05■□□□□ 0.48
SCAMP4-207ENST00000472442 RIMBP3CA6NJZ7 1639 aa18.05■□□□□ 0.48
SCAMP4-207ENST00000472442 RIMBP3BA6NNM3 1639 aa18.05■□□□□ 0.48
SCAMP4-207ENST00000472442 RIMBP3Q9UFD9 1639 aa18.05■□□□□ 0.48
SCAMP4-207ENST00000472442 TRPM2O94759 1503 aa18.04■□□□□ 0.48
SCAMP4-207ENST00000472442 ERICH6BQ5W0A0 696 aa18.03■□□□□ 0.48
SCAMP4-207ENST00000472442 ROCK2O75116 1388 aaKnown RBP18.03■□□□□ 0.48
SCAMP4-207ENST00000472442 MLH3Q9UHC1 1453 aa18.03■□□□□ 0.48
SCAMP4-207ENST00000472442 KANK1Q14678 1352 aa18.03■□□□□ 0.48
SCAMP4-207ENST00000472442 SPHKAPQ2M3C7 1700 aa18.02■□□□□ 0.48
SCAMP4-207ENST00000472442 NEO1Q92859 1461 aa18.02■□□□□ 0.48
SCAMP4-207ENST00000472442 DEKP35659 375 aaKnown RBP18.02■□□□□ 0.47
SCAMP4-207ENST00000472442 NBPF1Q3BBV0 1214 aa18.02■□□□□ 0.47
SCAMP4-207ENST00000472442 ST20-MTHFSA0A0A6YYL1 179 aa18.01■□□□□ 0.47
SCAMP4-207ENST00000472442 FRMPD1Q5SYB0 1578 aa18.01■□□□□ 0.47
SCAMP4-207ENST00000472442 HECW2Q9P2P5 1572 aa18■□□□□ 0.47
SCAMP4-207ENST00000472442 CLTCL1P53675 1640 aa18■□□□□ 0.47
SCAMP4-207ENST00000472442 RAPGEF3O95398 923 aa18■□□□□ 0.47
SCAMP4-207ENST00000472442 B4GALNT3Q6L9W6 998 aa18■□□□□ 0.47
SCAMP4-207ENST00000472442 MAP3K4Q9Y6R4 1608 aa17.99■□□□□ 0.47
SCAMP4-207ENST00000472442 GPRASP1Q5JY77 1395 aa17.99■□□□□ 0.47
SCAMP4-207ENST00000472442 CCDC184Q52MB2 194 aa17.98■□□□□ 0.47
SCAMP4-207ENST00000472442 PRKRIP1Q9H875 184 aaPredicted RBP17.98■□□□□ 0.47
SCAMP4-207ENST00000472442 ARID4BQ4LE39 1312 aaPredicted RBP17.98■□□□□ 0.47
SCAMP4-207ENST00000472442 CEP152O94986 1710 aa17.97■□□□□ 0.47
SCAMP4-207ENST00000472442 ABCA6Q8N139 1617 aa17.97■□□□□ 0.47
SCAMP4-207ENST00000472442 RNF17Q9BXT8 1623 aaKnown RBP17.97■□□□□ 0.47
SCAMP4-207ENST00000472442 EFCAB6Q5THR3 1501 aa17.96■□□□□ 0.47
SCAMP4-207ENST00000472442 GLI2P10070 1586 aa17.95■□□□□ 0.46
SCAMP4-207ENST00000472442 PPRC1Q5VV67 1664 aaKnown RBP17.95■□□□□ 0.46
SCAMP4-207ENST00000472442 POLR3GLQ9BT43 218 aa17.95■□□□□ 0.46
SCAMP4-207ENST00000472442 LMTK2Q8IWU2 1503 aa17.95■□□□□ 0.46
SCAMP4-207ENST00000472442 LAMC1P11047 1609 aa17.94■□□□□ 0.46
SCAMP4-207ENST00000472442 UGGT1Q9NYU2 1555 aa17.93■□□□□ 0.46
SCAMP4-207ENST00000472442 RICTORQ6R327 1708 aa17.93■□□□□ 0.46
SCAMP4-207ENST00000472442 MADDQ8WXG6 1647 aa17.92■□□□□ 0.46
SCAMP4-207ENST00000472442 FAM9BQ8IZU0 186 aa17.92■□□□□ 0.46
SCAMP4-207ENST00000472442 NOP58Q9Y2X3 529 aaKnown RBP17.91■□□□□ 0.46
SCAMP4-207ENST00000472442 NBR1Q14596 966 aa17.91■□□□□ 0.46
SCAMP4-207ENST00000472442 GGT6Q6P531 493 aa17.91■□□□□ 0.46
SCAMP4-207ENST00000472442 DIP2CQ9Y2E4 1556 aa17.9■□□□□ 0.46
SCAMP4-207ENST00000472442 DIP2BQ9P265 1576 aa17.89■□□□□ 0.45
SCAMP4-207ENST00000472442 FAM69CQ0P6D2 419 aa17.89■□□□□ 0.45
SCAMP4-207ENST00000472442 NEURL4Q96JN8 1562 aa17.88■□□□□ 0.45
SCAMP4-207ENST00000472442 TESK2Q96S53 571 aa17.88■□□□□ 0.45
SCAMP4-207ENST00000472442 NPATQ14207 1427 aa17.88■□□□□ 0.45
SCAMP4-207ENST00000472442 PAK3O75914 559 aaPredicted RBP17.88■□□□□ 0.45
SCAMP4-207ENST00000472442 ZBED9Q6R2W3 1325 aa17.87■□□□□ 0.45
SCAMP4-207ENST00000472442 MRS2Q9HD23 443 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms