RNA–Protein interactions for RNA: ENST00000471699.1

CCDC30-207, Transcript of coiled-coil domain containing 30, humanhuman

TSL 3

Gene CCDC30, Length 391 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-207ENST00000471699 COL9A1P20849 921 aa11.99□□□□□ -0.49
CCDC30-207ENST00000471699 SLC4A5Q9BY07 1137 aa11.99□□□□□ -0.49
CCDC30-207ENST00000471699 EPAS1Q99814 870 aa11.98□□□□□ -0.49
CCDC30-207ENST00000471699 PPP1R3GB7ZBB8 358 aa11.96□□□□□ -0.49
CCDC30-207ENST00000471699 KCNV2Q8TDN2 545 aa11.96□□□□□ -0.49
CCDC30-207ENST00000471699 PRIM1P49642 420 aaKnown RBP11.95□□□□□ -0.5
CCDC30-207ENST00000471699 NBR1Q14596 966 aa11.94□□□□□ -0.5
CCDC30-207ENST00000471699 RBM33Q96EV2 1170 aaKnown RBP11.94□□□□□ -0.5
CCDC30-207ENST00000471699 BHMG1C9JSJ3 638 aaPredicted RBP11.93□□□□□ -0.5
CCDC30-207ENST00000471699 C6orf132Q5T0Z8 1188 aa11.93□□□□□ -0.5
CCDC30-207ENST00000471699 EN1Q05925 392 aaPredicted RBP11.92□□□□□ -0.5
CCDC30-207ENST00000471699 PROX2Q3B8N5 592 aa11.92□□□□□ -0.5
CCDC30-207ENST00000471699 TSR1Q2NL82 804 aaKnown RBP11.9□□□□□ -0.5
CCDC30-207ENST00000471699 GRXCR2A6NFK2 248 aa11.88□□□□□ -0.51
CCDC30-207ENST00000471699 ARHGEF1Q92888 912 aaKnown RBP11.88□□□□□ -0.51
CCDC30-207ENST00000471699 OSBPP22059 807 aa11.87□□□□□ -0.51
CCDC30-207ENST00000471699 MAP3K7O43318 606 aa11.86□□□□□ -0.51
CCDC30-207ENST00000471699 KCTD12Q96CX2 325 aaKnown RBP11.84□□□□□ -0.51
CCDC30-207ENST00000471699 STAC3Q96MF2 364 aa11.83□□□□□ -0.52
CCDC30-207ENST00000471699 RABGEF1Q9UJ41 708 aa11.83□□□□□ -0.52
CCDC30-207ENST00000471699 MLLT3P42568 568 aaPredicted RBP11.82□□□□□ -0.52
CCDC30-207ENST00000471699 HAP1P54257 671 aaPredicted RBP11.82□□□□□ -0.52
CCDC30-207ENST00000471699 MRPL50Q8N5N7 158 aaKnown RBP11.81□□□□□ -0.52
CCDC30-207ENST00000471699 NBPF3Q9H094 633 aa11.81□□□□□ -0.52
CCDC30-207ENST00000471699 CDHR5Q9HBB8 845 aa11.81□□□□□ -0.52
CCDC30-207ENST00000471699 TRIM6-TRIM34B2RNG4 842 aa11.8□□□□□ -0.52
CCDC30-207ENST00000471699 KIAA1468Q9P260 1216 aa11.8□□□□□ -0.52
CCDC30-207ENST00000471699 HCSTQ9UBK5 93 aa11.79□□□□□ -0.52
CCDC30-207ENST00000471699 TSKSQ9UJT2 592 aa11.79□□□□□ -0.52
CCDC30-207ENST00000471699 KDM2AQ9Y2K7 1162 aa11.79□□□□□ -0.52
CCDC30-207ENST00000471699 ONECUT3O60422 494 aaPredicted RBP11.78□□□□□ -0.52
CCDC30-207ENST00000471699 P3H3Q8IVL6 736 aa11.78□□□□□ -0.52
CCDC30-207ENST00000471699 THSD4Q6ZMP0 1018 aa11.76□□□□□ -0.53
CCDC30-207ENST00000471699 FAM198AQ9UFP1 575 aa11.76□□□□□ -0.53
CCDC30-207ENST00000471699 WNT2BQ93097 391 aa11.75□□□□□ -0.53
CCDC30-207ENST00000471699 SEPT9Q9UHD8 586 aaPredicted RBP11.75□□□□□ -0.53
CCDC30-207ENST00000471699 NPDC1Q9NQX5 325 aaPredicted RBP11.74□□□□□ -0.53
CCDC30-207ENST00000471699 C3orf80F5H4A9 247 aa11.73□□□□□ -0.53
CCDC30-207ENST00000471699 PRSS12P56730 875 aa11.73□□□□□ -0.53
CCDC30-207ENST00000471699 LAPTM4BQ86VI4 370 aa11.73□□□□□ -0.53
CCDC30-207ENST00000471699 CDCA7LQ96GN5 454 aa11.73□□□□□ -0.53
CCDC30-207ENST00000471699 GOLGA8CPA6NN73 597 aa11.72□□□□□ -0.53
CCDC30-207ENST00000471699 SEMA3EO15041 775 aa11.72□□□□□ -0.53
CCDC30-207ENST00000471699 PTPN5P54829 565 aa11.71□□□□□ -0.53
CCDC30-207ENST00000471699 CERKQ8TCT0 537 aa11.71□□□□□ -0.53
CCDC30-207ENST00000471699 ZFRQ96KR1 1074 aaKnown RBP11.7□□□□□ -0.54
CCDC30-207ENST00000471699 BCAMP50895 628 aa11.68□□□□□ -0.54
CCDC30-207ENST00000471699 FAM98CQ17RN3 349 aaKnown RBP11.68□□□□□ -0.54
CCDC30-207ENST00000471699 PACS2Q86VP3 889 aa11.67□□□□□ -0.54
CCDC30-207ENST00000471699 TTC13Q8NBP0 860 aa11.67□□□□□ -0.54
CCDC30-207ENST00000471699 ANKK1Q8NFD2 765 aa11.67□□□□□ -0.54
CCDC30-207ENST00000471699 SMAPO00193 183 aa11.66□□□□□ -0.54
CCDC30-207ENST00000471699 RBM27Q9P2N5 1060 aaKnown RBP11.66□□□□□ -0.54
CCDC30-207ENST00000471699 TESPA1A2RU30 521 aaPredicted RBP11.64□□□□□ -0.55
CCDC30-207ENST00000471699 SOWAHBA6NEL2 793 aa11.64□□□□□ -0.55
CCDC30-207ENST00000471699 PADI6Q6TGC4 694 aa11.64□□□□□ -0.55
CCDC30-207ENST00000471699 TATDN2Q93075 761 aa11.63□□□□□ -0.55
CCDC30-207ENST00000471699 PLA2G2EQ9NZK7 142 aa11.63□□□□□ -0.55
CCDC30-207ENST00000471699 PTGDRQ13258 359 aa11.62□□□□□ -0.55
CCDC30-207ENST00000471699 VSIG10Q8N0Z9 540 aa11.61□□□□□ -0.55
CCDC30-207ENST00000471699 NBPF26B4DH59 902 aa11.6□□□□□ -0.55
CCDC30-207ENST00000471699 NUDT18Q6ZVK8 323 aa11.59□□□□□ -0.55
CCDC30-207ENST00000471699 PNMA3Q9UL41 463 aa11.59□□□□□ -0.55
CCDC30-207ENST00000471699 WBP1LQ9NX94 342 aa11.58□□□□□ -0.56
CCDC30-207ENST00000471699 NUTM2FA1L443 756 aa11.57□□□□□ -0.56
CCDC30-207ENST00000471699 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.57□□□□□ -0.56
CCDC30-207ENST00000471699 RBM26Q5T8P6 1007 aaKnown RBP11.56□□□□□ -0.56
CCDC30-207ENST00000471699 SAMD7Q7Z3H4 446 aa11.56□□□□□ -0.56
CCDC30-207ENST00000471699 LRCH3Q96II8 777 aa11.56□□□□□ -0.56
CCDC30-207ENST00000471699 HPS5Q9UPZ3 1129 aa11.54□□□□□ -0.56
CCDC30-207ENST00000471699 EYA1Q99502 592 aa11.53□□□□□ -0.56
CCDC30-207ENST00000471699 TSR3Q9UJK0 312 aaKnown RBP11.52□□□□□ -0.57
CCDC30-207ENST00000471699 GPR37O15354 613 aa11.51□□□□□ -0.57
CCDC30-207ENST00000471699 FCHSD2O94868 740 aa11.5□□□□□ -0.57
CCDC30-207ENST00000471699 ADGRG1Q9Y653 693 aa11.5□□□□□ -0.57
CCDC30-207ENST00000471699 FAM161AQ3B820 660 aa11.49□□□□□ -0.57
CCDC30-207ENST00000471699 IFFO2Q5TF58 517 aa11.48□□□□□ -0.57
CCDC30-207ENST00000471699 NYAP1Q6ZVC0 841 aa11.48□□□□□ -0.57
CCDC30-207ENST00000471699 ITGBL1O95965 494 aaPredicted RBP11.47□□□□□ -0.57
CCDC30-207ENST00000471699 SMYD5Q6GMV2 418 aa11.47□□□□□ -0.57
CCDC30-207ENST00000471699 SWT1Q5T5J6 900 aaKnown RBP11.46□□□□□ -0.57
CCDC30-207ENST00000471699 FECHP22830 423 aa11.45□□□□□ -0.58
CCDC30-207ENST00000471699 PPP4CP60510 307 aa11.44□□□□□ -0.58
CCDC30-207ENST00000471699 HIC1Q14526 733 aa11.43□□□□□ -0.58
CCDC30-207ENST00000471699 RNF40O75150 1001 aa11.41□□□□□ -0.58
CCDC30-207ENST00000471699 RBM46Q8TBY0 533 aaKnown RBP11.4□□□□□ -0.58
CCDC30-207ENST00000471699 TMEM134Q9H6X4 195 aa11.4□□□□□ -0.58
CCDC30-207ENST00000471699 A0A0G2JS52 829 aa11.39□□□□□ -0.59
CCDC30-207ENST00000471699 RCCD1A6NED2 376 aa11.39□□□□□ -0.59
CCDC30-207ENST00000471699 DNAJB2P25686 324 aa11.39□□□□□ -0.59
CCDC30-207ENST00000471699 APLP1P51693 650 aa11.39□□□□□ -0.59
CCDC30-207ENST00000471699 GNPATO15228 680 aa11.38□□□□□ -0.59
CCDC30-207ENST00000471699 HDGFP51858 240 aaKnown RBP11.38□□□□□ -0.59
CCDC30-207ENST00000471699 PXYLP1Q8TE99 480 aa11.38□□□□□ -0.59
CCDC30-207ENST00000471699 TJAP1Q5JTD0 557 aa11.37□□□□□ -0.59
CCDC30-207ENST00000471699 GPIHBP1Q8IV16 184 aa11.37□□□□□ -0.59
CCDC30-207ENST00000471699 SLF2Q8IX21 1173 aa11.37□□□□□ -0.59
CCDC30-207ENST00000471699 METTL3Q86U44 580 aaKnown RBP11.36□□□□□ -0.59
CCDC30-207ENST00000471699 KCNC4Q03721 635 aa11.34□□□□□ -0.59
CCDC30-207ENST00000471699 OATP04181 439 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms