RNA–Protein interactions for RNA: ENST00000471595.5

PCCB-210, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCCB, Length 6,090 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-210ENST00000471595 LMOD3Q0VAK6 560 aa16.3■□□□□ 0.2
PCCB-210ENST00000471595 SOX12O15370 315 aa16.3■□□□□ 0.2
PCCB-210ENST00000471595 PDE4AP27815 886 aa16.3■□□□□ 0.2
PCCB-210ENST00000471595 NGEFQ8N5V2 710 aa16.29■□□□□ 0.2
PCCB-210ENST00000471595 MFAP1P55081 439 aaKnown RBP16.29■□□□□ 0.2
PCCB-210ENST00000471595 CHAF1AQ13111 956 aaPredicted RBP16.29■□□□□ 0.2
PCCB-210ENST00000471595 FAM161AQ3B820 660 aa16.29■□□□□ 0.2
PCCB-210ENST00000471595 KIAA1211Q6ZU35 1233 aa16.29■□□□□ 0.2
PCCB-210ENST00000471595 PTPRGP23470 1445 aa16.28■□□□□ 0.2
PCCB-210ENST00000471595 RAD54L2Q9Y4B4 1467 aa16.28■□□□□ 0.2
PCCB-210ENST00000471595 SYNJ1O43426 1573 aa16.28■□□□□ 0.2
PCCB-210ENST00000471595 WASHC2CQ9Y4E1 1318 aa16.27■□□□□ 0.2
PCCB-210ENST00000471595 HMMRO75330 724 aa16.27■□□□□ 0.2
PCCB-210ENST00000471595 EXOC6Q8TAG9 804 aa16.27■□□□□ 0.2
PCCB-210ENST00000471595 ARAP1Q96P48 1450 aa16.27■□□□□ 0.2
PCCB-210ENST00000471595 NCOA2Q15596 1464 aa16.27■□□□□ 0.19
PCCB-210ENST00000471595 GOLGA6L3A6NEY3 463 aa16.26■□□□□ 0.19
PCCB-210ENST00000471595 CLUAP1Q96AJ1 413 aa16.26■□□□□ 0.19
PCCB-210ENST00000471595 MIA2Q96PC5 1412 aa16.26■□□□□ 0.19
PCCB-210ENST00000471595 CGNL1Q0VF96 1302 aa16.26■□□□□ 0.19
PCCB-210ENST00000471595 KIF7Q2M1P5 1343 aa16.26■□□□□ 0.19
PCCB-210ENST00000471595 APBB1O00213 710 aa16.25■□□□□ 0.19
PCCB-210ENST00000471595 STK31Q9BXU1 1019 aa16.25■□□□□ 0.19
PCCB-210ENST00000471595 SYAP1Q96A49 352 aaPredicted RBP16.24■□□□□ 0.19
PCCB-210ENST00000471595 STAC3Q96MF2 364 aa16.24■□□□□ 0.19
PCCB-210ENST00000471595 NAP1L2Q9ULW6 460 aaPredicted RBP16.24■□□□□ 0.19
PCCB-210ENST00000471595 CRBNQ96SW2 442 aa16.24■□□□□ 0.19
PCCB-210ENST00000471595 TRAK1Q9UPV9 953 aa16.23■□□□□ 0.19
PCCB-210ENST00000471595 GZF1Q9H116 711 aaPredicted RBP16.23■□□□□ 0.19
PCCB-210ENST00000471595 HDAC5Q9UQL6 1122 aa16.22■□□□□ 0.19
PCCB-210ENST00000471595 PRXQ9BXM0 1461 aa16.22■□□□□ 0.19
PCCB-210ENST00000471595 EFCAB5A4FU69 1503 aa16.22■□□□□ 0.19
PCCB-210ENST00000471595 PLIN1O60240 522 aa16.21■□□□□ 0.19
PCCB-210ENST00000471595 TOP2BQ02880 1626 aa16.2■□□□□ 0.18
PCCB-210ENST00000471595 EVC2Q86UK5 1308 aa16.2■□□□□ 0.18
PCCB-210ENST00000471595 ZKSCAN2Q63HK3 967 aa16.2■□□□□ 0.18
PCCB-210ENST00000471595 CFTRP13569 1480 aa16.19■□□□□ 0.18
PCCB-210ENST00000471595 VGFO15240 615 aaPredicted RBP16.19■□□□□ 0.18
PCCB-210ENST00000471595 WASHC2AQ641Q2 1341 aa16.18■□□□□ 0.18
PCCB-210ENST00000471595 HTATSF1O43719 755 aaKnown RBP16.18■□□□□ 0.18
PCCB-210ENST00000471595 ANKRD50Q9ULJ7 1429 aa16.18■□□□□ 0.18
PCCB-210ENST00000471595 DDX11L8A8MPP1 907 aa16.18■□□□□ 0.18
PCCB-210ENST00000471595 BRD4O60885 1362 aaPredicted RBP16.18■□□□□ 0.18
PCCB-210ENST00000471595 RRP7AQ9Y3A4 280 aaKnown RBP16.18■□□□□ 0.18
PCCB-210ENST00000471595 DRC7Q8IY82 874 aa16.18■□□□□ 0.18
PCCB-210ENST00000471595 KIAA2012Q0VF49 1180 aa16.17■□□□□ 0.18
PCCB-210ENST00000471595 GPATCH3Q96I76 525 aa16.17■□□□□ 0.18
PCCB-210ENST00000471595 APAF1O14727 1248 aa16.16■□□□□ 0.18
PCCB-210ENST00000471595 ST18O60284 1047 aa16.16■□□□□ 0.18
PCCB-210ENST00000471595 ZNF644Q9H582 1327 aaPredicted RBP16.15■□□□□ 0.18
PCCB-210ENST00000471595 PAK3O75914 559 aaPredicted RBP16.15■□□□□ 0.18
PCCB-210ENST00000471595 NUTM2DQ5VT03 806 aaPredicted RBP16.15■□□□□ 0.18
PCCB-210ENST00000471595 EHBP1L1Q8N3D4 1523 aa16.15■□□□□ 0.18
PCCB-210ENST00000471595 CSPP1Q1MSJ5 1256 aa16.14■□□□□ 0.17
PCCB-210ENST00000471595 TRIM6-TRIM34B2RNG4 842 aa16.14■□□□□ 0.17
PCCB-210ENST00000471595 PRDM2Q13029 1718 aa16.13■□□□□ 0.17
PCCB-210ENST00000471595 TIAM1Q13009 1591 aa16.13■□□□□ 0.17
PCCB-210ENST00000471595 AAMPQ13685 434 aa16.13■□□□□ 0.17
PCCB-210ENST00000471595 GSE1Q14687 1217 aa16.13■□□□□ 0.17
PCCB-210ENST00000471595 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.13■□□□□ 0.17
PCCB-210ENST00000471595 COG6Q9Y2V7 657 aa16.13■□□□□ 0.17
PCCB-210ENST00000471595 TAOK2Q9UL54 1235 aa16.12■□□□□ 0.17
PCCB-210ENST00000471595 DDX19BQ9UMR2 479 aa16.12■□□□□ 0.17
PCCB-210ENST00000471595 EID1Q9Y6B2 187 aa16.12■□□□□ 0.17
PCCB-210ENST00000471595 SLC4A10Q6U841 1118 aa16.11■□□□□ 0.17
PCCB-210ENST00000471595 HFM1A2PYH4 1435 aa16.11■□□□□ 0.17
PCCB-210ENST00000471595 BCL2L13Q9BXK5 485 aa16.1■□□□□ 0.17
PCCB-210ENST00000471595 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.1■□□□□ 0.17
PCCB-210ENST00000471595 SKOR2Q2VWA4 1001 aaPredicted RBP16.1■□□□□ 0.17
PCCB-210ENST00000471595 RUNDC1Q96C34 613 aa16.1■□□□□ 0.17
PCCB-210ENST00000471595 PHF14O94880 888 aa16.09■□□□□ 0.17
PCCB-210ENST00000471595 GRIN2BQ13224 1484 aa16.09■□□□□ 0.17
PCCB-210ENST00000471595 AMPHP49418 695 aa16.09■□□□□ 0.17
PCCB-210ENST00000471595 NGDNQ8NEJ9 315 aaKnown RBP16.09■□□□□ 0.17
PCCB-210ENST00000471595 GNL2Q13823 731 aaKnown RBP16.09■□□□□ 0.17
PCCB-210ENST00000471595 NPHP1O15259 732 aa16.08■□□□□ 0.17
PCCB-210ENST00000471595 ANKRD45Q5TZF3 282 aa16.08■□□□□ 0.17
PCCB-210ENST00000471595 COG3Q96JB2 828 aa16.08■□□□□ 0.17
PCCB-210ENST00000471595 HMGXB3Q12766 1538 aa16.08■□□□□ 0.16
PCCB-210ENST00000471595 DZIP1LQ8IYY4 767 aaKnown RBP16.07■□□□□ 0.16
PCCB-210ENST00000471595 AQRO60306 1485 aaKnown RBP eCLIP16.07■□□□□ 0.162e-6■■■■□ 22.2
PCCB-210ENST00000471595 SLC4A3P48751 1232 aa16.07■□□□□ 0.16
PCCB-210ENST00000471595 DIAPH1O60610 1272 aaKnown RBP16.06■□□□□ 0.16
PCCB-210ENST00000471595 FOXD4L1Q9NU39 408 aa16.06■□□□□ 0.16
PCCB-210ENST00000471595 CSB-PGBD3P0DP91 1061 aa16.05■□□□□ 0.16
PCCB-210ENST00000471595 KIAA1107Q9UPP5 1409 aa16.04■□□□□ 0.16
PCCB-210ENST00000471595 API5Q9BZZ5 524 aaKnown RBP16.03■□□□□ 0.16
PCCB-210ENST00000471595 TPM4P67936 248 aa16.03■□□□□ 0.16
PCCB-210ENST00000471595 HECW1Q76N89 1606 aa16.03■□□□□ 0.16
PCCB-210ENST00000471595 KIF16BQ96L93 1317 aa16.03■□□□□ 0.16
PCCB-210ENST00000471595 ROCK1Q13464 1354 aa16.02■□□□□ 0.16
PCCB-210ENST00000471595 RIPK4P57078 832 aa16.01■□□□□ 0.15
PCCB-210ENST00000471595 MINK1Q8N4C8 1332 aaPredicted RBP16.01■□□□□ 0.15
PCCB-210ENST00000471595 ELL2O00472 640 aaPredicted RBP16.01■□□□□ 0.15
PCCB-210ENST00000471595 CHMP5Q9NZZ3 219 aa16.01■□□□□ 0.15
PCCB-210ENST00000471595 SUPT6HQ7KZ85 1726 aaKnown RBP16■□□□□ 0.15
PCCB-210ENST00000471595 DDX49Q9Y6V7 483 aaKnown RBP16■□□□□ 0.15
PCCB-210ENST00000471595 HSP90B1P14625 803 aaKnown RBP16■□□□□ 0.15
PCCB-210ENST00000471595 REC8O95072 547 aa16■□□□□ 0.15
PCCB-210ENST00000471595 RSPH6AQ9H0K4 717 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms