RNA–Protein interactions for RNA: ENST00000471145.1

NPHP3-205, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 435 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-205ENST00000471145 KCNV2Q8TDN2 545 aa10.58□□□□□ -0.72
NPHP3-205ENST00000471145 DDX12PQ92771 950 aa10.58□□□□□ -0.72
NPHP3-205ENST00000471145 BCANQ96GW7 911 aa10.58□□□□□ -0.72
NPHP3-205ENST00000471145 ADGRD1Q6QNK2 874 aa10.57□□□□□ -0.72
NPHP3-205ENST00000471145 SLC4A5Q9BY07 1137 aa10.57□□□□□ -0.72
NPHP3-205ENST00000471145 C6orf132Q5T0Z8 1188 aa10.53□□□□□ -0.72
NPHP3-205ENST00000471145 MYT1LQ9UL68 1186 aa10.53□□□□□ -0.72
NPHP3-205ENST00000471145 PPP1R3GB7ZBB8 358 aa10.52□□□□□ -0.73
NPHP3-205ENST00000471145 NBR1Q14596 966 aa10.52□□□□□ -0.73
NPHP3-205ENST00000471145 VPS9D1Q9Y2B5 631 aa10.52□□□□□ -0.73
NPHP3-205ENST00000471145 GRXCR2A6NFK2 248 aa10.51□□□□□ -0.73
NPHP3-205ENST00000471145 HRO43593 1189 aa10.51□□□□□ -0.73
NPHP3-205ENST00000471145 ZBED2Q9BTP6 218 aa10.51□□□□□ -0.73
NPHP3-205ENST00000471145 EN1Q05925 392 aaPredicted RBP10.5□□□□□ -0.73
NPHP3-205ENST00000471145 RBM33Q96EV2 1170 aaKnown RBP10.5□□□□□ -0.73
NPHP3-205ENST00000471145 PRKCSHP14314 528 aaPredicted RBP10.48□□□□□ -0.73
NPHP3-205ENST00000471145 OSBPP22059 807 aa10.48□□□□□ -0.73
NPHP3-205ENST00000471145 RNF166Q96A37 237 aaPredicted RBP10.48□□□□□ -0.73
NPHP3-205ENST00000471145 STAC3Q96MF2 364 aa10.48□□□□□ -0.73
NPHP3-205ENST00000471145 MAP3K7O43318 606 aa10.47□□□□□ -0.73
NPHP3-205ENST00000471145 COL9A1P20849 921 aa10.47□□□□□ -0.73
NPHP3-205ENST00000471145 ONECUT3O60422 494 aaPredicted RBP10.46□□□□□ -0.73
NPHP3-205ENST00000471145 BHMG1C9JSJ3 638 aaPredicted RBP10.44□□□□□ -0.74
NPHP3-205ENST00000471145 PRIM1P49642 420 aaKnown RBP10.43□□□□□ -0.74
NPHP3-205ENST00000471145 TSR1Q2NL82 804 aaKnown RBP10.43□□□□□ -0.74
NPHP3-205ENST00000471145 CERKQ8TCT0 537 aa10.43□□□□□ -0.74
NPHP3-205ENST00000471145 RABGEF1Q9UJ41 708 aa10.43□□□□□ -0.74
NPHP3-205ENST00000471145 MLLT3P42568 568 aaPredicted RBP10.42□□□□□ -0.74
NPHP3-205ENST00000471145 NBPF3Q9H094 633 aa10.41□□□□□ -0.74
NPHP3-205ENST00000471145 PROX2Q3B8N5 592 aa10.4□□□□□ -0.74
NPHP3-205ENST00000471145 SEMA3EO15041 775 aa10.39□□□□□ -0.75
NPHP3-205ENST00000471145 MRPL50Q8N5N7 158 aaKnown RBP10.39□□□□□ -0.75
NPHP3-205ENST00000471145 TRIM6-TRIM34B2RNG4 842 aa10.38□□□□□ -0.75
NPHP3-205ENST00000471145 KIAA1468Q9P260 1216 aa10.38□□□□□ -0.75
NPHP3-205ENST00000471145 PRSS12P56730 875 aa10.36□□□□□ -0.75
NPHP3-205ENST00000471145 PACS2Q86VP3 889 aa10.36□□□□□ -0.75
NPHP3-205ENST00000471145 TESPA1A2RU30 521 aaPredicted RBP10.35□□□□□ -0.75
NPHP3-205ENST00000471145 GOLGA8CPA6NN73 597 aa10.35□□□□□ -0.75
NPHP3-205ENST00000471145 TPRNQ4KMQ1 711 aa10.35□□□□□ -0.75
NPHP3-205ENST00000471145 SMYD5Q6GMV2 418 aa10.35□□□□□ -0.75
NPHP3-205ENST00000471145 LAPTM4BQ86VI4 370 aa10.35□□□□□ -0.75
NPHP3-205ENST00000471145 CDCA7LQ96GN5 454 aa10.35□□□□□ -0.75
NPHP3-205ENST00000471145 NPDC1Q9NQX5 325 aaPredicted RBP10.34□□□□□ -0.75
NPHP3-205ENST00000471145 KCTD12Q96CX2 325 aaKnown RBP10.33□□□□□ -0.76
NPHP3-205ENST00000471145 CDHR5Q9HBB8 845 aa10.33□□□□□ -0.76
NPHP3-205ENST00000471145 RBM27Q9P2N5 1060 aaKnown RBP10.33□□□□□ -0.76
NPHP3-205ENST00000471145 HCSTQ9UBK5 93 aa10.33□□□□□ -0.76
NPHP3-205ENST00000471145 TSKSQ9UJT2 592 aa10.33□□□□□ -0.76
NPHP3-205ENST00000471145 WNT2BQ93097 391 aa10.3□□□□□ -0.76
NPHP3-205ENST00000471145 FAM98CQ17RN3 349 aaKnown RBP10.28□□□□□ -0.76
NPHP3-205ENST00000471145 TTC13Q8NBP0 860 aa10.28□□□□□ -0.76
NPHP3-205ENST00000471145 FAM198AQ9UFP1 575 aa10.28□□□□□ -0.76
NPHP3-205ENST00000471145 NUTM2FA1L443 756 aa10.27□□□□□ -0.77
NPHP3-205ENST00000471145 PTGDRQ13258 359 aa10.27□□□□□ -0.77
NPHP3-205ENST00000471145 THSD4Q6ZMP0 1018 aa10.27□□□□□ -0.77
NPHP3-205ENST00000471145 ANKK1Q8NFD2 765 aa10.27□□□□□ -0.77
NPHP3-205ENST00000471145 ZFRQ96KR1 1074 aaKnown RBP10.27□□□□□ -0.77
NPHP3-205ENST00000471145 SEPT9Q9UHD8 586 aaPredicted RBP10.26□□□□□ -0.77
NPHP3-205ENST00000471145 NBPF26B4DH59 902 aa10.25□□□□□ -0.77
NPHP3-205ENST00000471145 TATDN2Q93075 761 aa10.25□□□□□ -0.77
NPHP3-205ENST00000471145 FCHSD2O94868 740 aa10.24□□□□□ -0.77
NPHP3-205ENST00000471145 PADI6Q6TGC4 694 aa10.24□□□□□ -0.77
NPHP3-205ENST00000471145 RBM26Q5T8P6 1007 aaKnown RBP10.23□□□□□ -0.77
NPHP3-205ENST00000471145 PNMA3Q9UL41 463 aa10.23□□□□□ -0.77
NPHP3-205ENST00000471145 SOWAHBA6NEL2 793 aa10.22□□□□□ -0.77
NPHP3-205ENST00000471145 PTPN5P54829 565 aa10.22□□□□□ -0.77
NPHP3-205ENST00000471145 SMAPO00193 183 aa10.21□□□□□ -0.77
NPHP3-205ENST00000471145 TULP1O00294 542 aaPredicted RBP10.21□□□□□ -0.77
NPHP3-205ENST00000471145 NUDT18Q6ZVK8 323 aa10.21□□□□□ -0.77
NPHP3-205ENST00000471145 C3orf80F5H4A9 247 aa10.2□□□□□ -0.78
NPHP3-205ENST00000471145 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.19□□□□□ -0.78
NPHP3-205ENST00000471145 HIC1Q14526 733 aa10.18□□□□□ -0.78
NPHP3-205ENST00000471145 LRCH3Q96II8 777 aa10.18□□□□□ -0.78
NPHP3-205ENST00000471145 BCAMP50895 628 aa10.17□□□□□ -0.78
NPHP3-205ENST00000471145 HDGFP51858 240 aaKnown RBP10.17□□□□□ -0.78
NPHP3-205ENST00000471145 EYA1Q99502 592 aa10.17□□□□□ -0.78
NPHP3-205ENST00000471145 NYAP1Q6ZVC0 841 aa10.16□□□□□ -0.78
NPHP3-205ENST00000471145 TSR3Q9UJK0 312 aaKnown RBP10.15□□□□□ -0.78
NPHP3-205ENST00000471145 SAMD7Q7Z3H4 446 aa10.14□□□□□ -0.79
NPHP3-205ENST00000471145 RBM46Q8TBY0 533 aaKnown RBP10.14□□□□□ -0.79
NPHP3-205ENST00000471145 ADGRG1Q9Y653 693 aa10.14□□□□□ -0.79
NPHP3-205ENST00000471145 GNPATO15228 680 aa10.13□□□□□ -0.79
NPHP3-205ENST00000471145 GPIHBP1Q8IV16 184 aa10.13□□□□□ -0.79
NPHP3-205ENST00000471145 GPR37O15354 613 aa10.12□□□□□ -0.79
NPHP3-205ENST00000471145 OATP04181 439 aa10.12□□□□□ -0.79
NPHP3-205ENST00000471145 WBP1LQ9NX94 342 aa10.12□□□□□ -0.79
NPHP3-205ENST00000471145 HPS5Q9UPZ3 1129 aa10.12□□□□□ -0.79
NPHP3-205ENST00000471145 PPP4CP60510 307 aa10.11□□□□□ -0.79
NPHP3-205ENST00000471145 PLA2G2EQ9NZK7 142 aa10.11□□□□□ -0.79
NPHP3-205ENST00000471145 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.1□□□□□ -0.79
NPHP3-205ENST00000471145 DNAJB2P25686 324 aa10.09□□□□□ -0.79
NPHP3-205ENST00000471145 NECTIN2Q92692 538 aa10.09□□□□□ -0.79
NPHP3-205ENST00000471145 SLC4A3P48751 1232 aa10.08□□□□□ -0.8
NPHP3-205ENST00000471145 SWT1Q5T5J6 900 aaKnown RBP10.08□□□□□ -0.8
NPHP3-205ENST00000471145 SLF2Q8IX21 1173 aa10.08□□□□□ -0.8
NPHP3-205ENST00000471145 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.06□□□□□ -0.8
NPHP3-205ENST00000471145 RCCD1A6NED2 376 aa10.06□□□□□ -0.8
NPHP3-205ENST00000471145 FECHP22830 423 aa10.06□□□□□ -0.8
NPHP3-205ENST00000471145 FAM161AQ3B820 660 aa10.06□□□□□ -0.8
NPHP3-205ENST00000471145 IFFO2Q5TF58 517 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms