RNA–Protein interactions for RNA: ENST00000471070.1

GSE1-208, Transcript of Gse1 coiled-coil protein, humanhuman

TSL 3

Gene GSE1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-208ENST00000471070 PKD2Q13563 968 aa13.29□□□□□ -0.28
GSE1-208ENST00000471070 PTPRKQ15262 1439 aa13.29□□□□□ -0.28
GSE1-208ENST00000471070 RNF17Q9BXT8 1623 aaKnown RBP13.28□□□□□ -0.28
GSE1-208ENST00000471070 ADGBQ8N7X0 1667 aa13.28□□□□□ -0.28
GSE1-208ENST00000471070 VWDEQ8N2E2 1590 aa13.28□□□□□ -0.28
GSE1-208ENST00000471070 EEA1Q15075 1411 aa13.27□□□□□ -0.29
GSE1-208ENST00000471070 A2ML1A8K2U0 1454 aa13.27□□□□□ -0.29
GSE1-208ENST00000471070 ARHGAP35Q9NRY4 1499 aa13.27□□□□□ -0.29
GSE1-208ENST00000471070 SLC4A2P04920 1241 aa13.26□□□□□ -0.29
GSE1-208ENST00000471070 SHANK2Q9UPX8 1470 aa13.26□□□□□ -0.29
GSE1-208ENST00000471070 SYNMO15061 1565 aa13.25□□□□□ -0.29
GSE1-208ENST00000471070 CDK11AQ9UQ88 783 aaPredicted RBP13.25□□□□□ -0.29
GSE1-208ENST00000471070 IQGAP1P46940 1657 aa13.24□□□□□ -0.29
GSE1-208ENST00000471070 TOM1O60784 492 aa13.24□□□□□ -0.29
GSE1-208ENST00000471070 CAPN15O75808 1086 aa13.23□□□□□ -0.29
GSE1-208ENST00000471070 A2MP01023 1474 aa13.23□□□□□ -0.29
GSE1-208ENST00000471070 XIRP1Q702N8 1843 aaKnown RBP13.2□□□□□ -0.3
GSE1-208ENST00000471070 SPINK5Q9NQ38 1064 aaPredicted RBP13.2□□□□□ -0.3
GSE1-208ENST00000471070 DEPDC5O75140 1603 aa13.2□□□□□ -0.3
GSE1-208ENST00000471070 CCDC18Q5T9S5 1454 aa13.19□□□□□ -0.3
GSE1-208ENST00000471070 EHMT2Q96KQ7 1210 aa13.18□□□□□ -0.3
GSE1-208ENST00000471070 SPAG9O60271 1321 aaKnown RBP13.17□□□□□ -0.3
GSE1-208ENST00000471070 APLP2Q06481 763 aa13.17□□□□□ -0.3
GSE1-208ENST00000471070 ZC3H13Q5T200 1668 aaKnown RBP13.17□□□□□ -0.3
GSE1-208ENST00000471070 ZNF777Q9ULD5 760 aaPredicted RBP13.16□□□□□ -0.3
GSE1-208ENST00000471070 DSG3P32926 999 aa13.15□□□□□ -0.3
GSE1-208ENST00000471070 GGT6Q6P531 493 aa13.15□□□□□ -0.3
GSE1-208ENST00000471070 NPHP4O75161 1426 aaPredicted RBP13.14□□□□□ -0.31
GSE1-208ENST00000471070 LRRC7Q96NW7 1537 aa13.14□□□□□ -0.31
GSE1-208ENST00000471070 KDM5DQ9BY66 1539 aa13.14□□□□□ -0.31
GSE1-208ENST00000471070 TNRQ92752 1358 aa13.14□□□□□ -0.31
GSE1-208ENST00000471070 UGGT1Q9NYU2 1555 aa13.13□□□□□ -0.31
GSE1-208ENST00000471070 PZPP20742 1482 aa13.13□□□□□ -0.31
GSE1-208ENST00000471070 RGS17Q9UGC6 210 aaPredicted RBP13.13□□□□□ -0.31
GSE1-208ENST00000471070 CFAP65Q6ZU64 1925 aaKnown RBP13.13□□□□□ -0.31
GSE1-208ENST00000471070 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.12□□□□□ -0.31
GSE1-208ENST00000471070 GPATCH8Q9UKJ3 1502 aaKnown RBP13.12□□□□□ -0.31
GSE1-208ENST00000471070 MED14O60244 1454 aa13.11□□□□□ -0.31
GSE1-208ENST00000471070 HNRNPMP52272 730 aaKnown RBP eCLIP13.11□□□□□ -0.31
GSE1-208ENST00000471070 CASKIN1Q8WXD9 1431 aa13.11□□□□□ -0.31
GSE1-208ENST00000471070 PLEKHH2Q8IVE3 1493 aa13.1□□□□□ -0.31
GSE1-208ENST00000471070 FAM135AQ9P2D6 1515 aa13.09□□□□□ -0.31
GSE1-208ENST00000471070 UBTFP17480 764 aaKnown RBP13.09□□□□□ -0.31
GSE1-208ENST00000471070 FYCO1Q9BQS8 1478 aa13.09□□□□□ -0.31
GSE1-208ENST00000471070 UBR1Q8IWV7 1749 aa13.08□□□□□ -0.32
GSE1-208ENST00000471070 TIAM1Q13009 1591 aa13.08□□□□□ -0.32
GSE1-208ENST00000471070 NLRP1Q9C000 1473 aa13.08□□□□□ -0.32
GSE1-208ENST00000471070 ROBO1Q9Y6N7 1651 aa13.08□□□□□ -0.32
GSE1-208ENST00000471070 KIAA1107Q9UPP5 1409 aa13.07□□□□□ -0.32
GSE1-208ENST00000471070 FBXO31Q5XUX0 539 aaPredicted RBP13.07□□□□□ -0.32
GSE1-208ENST00000471070 CEP152O94986 1710 aa13.07□□□□□ -0.32
GSE1-208ENST00000471070 ANKLE2Q86XL3 938 aa13.06□□□□□ -0.32
GSE1-208ENST00000471070 POTEAQ6S8J7 498 aa13.05□□□□□ -0.32
GSE1-208ENST00000471070 PHLPP1O60346 1717 aa13.03□□□□□ -0.32
GSE1-208ENST00000471070 SAMD1Q6SPF0 538 aaPredicted RBP13.03□□□□□ -0.32
GSE1-208ENST00000471070 ZNF219Q9P2Y4 722 aaPredicted RBP13.03□□□□□ -0.32
GSE1-208ENST00000471070 MIA2Q96PC5 1412 aa13.02□□□□□ -0.33
GSE1-208ENST00000471070 CCNB3Q8WWL7 1395 aa13.01□□□□□ -0.33
GSE1-208ENST00000471070 MBD5Q9P267 1494 aa13□□□□□ -0.33
GSE1-208ENST00000471070 CFDP1Q9UEE9 299 aaPredicted RBP13□□□□□ -0.33
GSE1-208ENST00000471070 DHX29Q7Z478 1369 aaKnown RBP12.99□□□□□ -0.33
GSE1-208ENST00000471070 THEMISQ8N1K5 641 aaPredicted RBP12.99□□□□□ -0.33
GSE1-208ENST00000471070 ABCC3O15438 1527 aa12.98□□□□□ -0.33
GSE1-208ENST00000471070 ERVK-7P63135 1459 aa12.98□□□□□ -0.33
GSE1-208ENST00000471070 SCAF11Q99590 1463 aaKnown RBP12.98□□□□□ -0.33
GSE1-208ENST00000471070 RTEL1-TNFRSF6BF6WH68 1400 aa12.98□□□□□ -0.33
GSE1-208ENST00000471070 KIF3BO15066 747 aa12.98□□□□□ -0.33
GSE1-208ENST00000471070 CCDC141Q6ZP82 1450 aa12.97□□□□□ -0.33
GSE1-208ENST00000471070 MAP3K1Q13233 1512 aa12.97□□□□□ -0.33
GSE1-208ENST00000471070 EHBP1L1Q8N3D4 1523 aa12.97□□□□□ -0.33
GSE1-208ENST00000471070 MROH1Q8NDA8 1641 aa12.96□□□□□ -0.33
GSE1-208ENST00000471070 ZNF644Q9H582 1327 aaPredicted RBP12.96□□□□□ -0.33
GSE1-208ENST00000471070 WASHC2CQ9Y4E1 1318 aa12.95□□□□□ -0.34
GSE1-208ENST00000471070 CAMSAP2Q08AD1 1489 aa12.95□□□□□ -0.34
GSE1-208ENST00000471070 EIF2AK4Q9P2K8 1649 aaKnown RBP12.95□□□□□ -0.34
GSE1-208ENST00000471070 NCOA2Q15596 1464 aa12.94□□□□□ -0.34
GSE1-208ENST00000471070 PIK3C2BO00750 1634 aa12.94□□□□□ -0.34
GSE1-208ENST00000471070 FAM135BQ49AJ0 1406 aa12.94□□□□□ -0.34
GSE1-208ENST00000471070 MTUS2Q5JR59 1369 aa12.94□□□□□ -0.34
GSE1-208ENST00000471070 SLIT1O75093 1534 aa12.93□□□□□ -0.34
GSE1-208ENST00000471070 COL16A1Q07092 1604 aaPredicted RBP12.93□□□□□ -0.34
GSE1-208ENST00000471070 LRRC9Q6ZRR7 1453 aa12.92□□□□□ -0.34
GSE1-208ENST00000471070 ARHGAP23Q9P227 1491 aa12.92□□□□□ -0.34
GSE1-208ENST00000471070 LRP6O75581 1613 aa12.91□□□□□ -0.34
GSE1-208ENST00000471070 NWD1Q149M9 1564 aa12.9□□□□□ -0.34
GSE1-208ENST00000471070 MYCNP04198 464 aaPredicted RBP12.9□□□□□ -0.34
GSE1-208ENST00000471070 ARHGEF5Q12774 1597 aa12.9□□□□□ -0.35
GSE1-208ENST00000471070 TMEM94Q12767 1356 aa12.89□□□□□ -0.35
GSE1-208ENST00000471070 KDM5AP29375 1690 aaKnown RBP12.89□□□□□ -0.35
GSE1-208ENST00000471070 SHPRHQ149N8 1683 aa12.89□□□□□ -0.35
GSE1-208ENST00000471070 ABCB7O75027 752 aa12.87□□□□□ -0.35
GSE1-208ENST00000471070 UPF1Q92900 1129 aaKnown RBP eCLIP12.87□□□□□ -0.35
GSE1-208ENST00000471070 MYO5BQ9ULV0 1848 aa12.87□□□□□ -0.35
GSE1-208ENST00000471070 MAST1Q9Y2H9 1570 aa12.86□□□□□ -0.35
GSE1-208ENST00000471070 LTKP29376 864 aa12.86□□□□□ -0.35
GSE1-208ENST00000471070 TRIM52Q96A61 297 aa12.86□□□□□ -0.35
GSE1-208ENST00000471070 SLC4A1APQ9BWU0 796 aaKnown RBP12.86□□□□□ -0.35
GSE1-208ENST00000471070 CEP162Q5TB80 1403 aa12.86□□□□□ -0.35
GSE1-208ENST00000471070 NKTRP30414 1462 aaKnown RBP12.85□□□□□ -0.35
GSE1-208ENST00000471070 PRDM15P57071 1507 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms