RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 CLCN6P51797 869 aa14.5□□□□□ -0.09
XRN1-208ENST00000470537 LHX8Q68G74 356 aa14.5□□□□□ -0.09
XRN1-208ENST00000470537 CNTLNQ9NXG0 1405 aa14.49□□□□□ -0.09
XRN1-208ENST00000470537 KDM5CP41229 1560 aa14.49□□□□□ -0.09
XRN1-208ENST00000470537 REREQ9P2R6 1566 aa14.49□□□□□ -0.09
XRN1-208ENST00000470537 ZRANB1Q9UGI0 708 aa14.48□□□□□ -0.09
XRN1-208ENST00000470537 STRCQ7RTU9 1775 aa14.47□□□□□ -0.09
XRN1-208ENST00000470537 AGLP35573 1532 aa14.46□□□□□ -0.09
XRN1-208ENST00000470537 IQSEC2Q5JU85 1478 aa14.46□□□□□ -0.09
XRN1-208ENST00000470537 ARHGAP35Q9NRY4 1499 aa14.45□□□□□ -0.1
XRN1-208ENST00000470537 ZNF579Q8NAF0 562 aaKnown RBP14.45□□□□□ -0.1
XRN1-208ENST00000470537 DIP2CQ9Y2E4 1556 aa14.44□□□□□ -0.1
XRN1-208ENST00000470537 POTEIP0CG38 1075 aa14.44□□□□□ -0.1
XRN1-208ENST00000470537 ILDR2Q71H61 639 aa14.44□□□□□ -0.1
XRN1-208ENST00000470537 CCDC18Q5T9S5 1454 aa14.43□□□□□ -0.1
XRN1-208ENST00000470537 NPATQ14207 1427 aa14.42□□□□□ -0.1
XRN1-208ENST00000470537 C3P01024 1663 aa14.42□□□□□ -0.1
XRN1-208ENST00000470537 DCBLD2Q96PD2 775 aa14.41□□□□□ -0.1
XRN1-208ENST00000470537 PKD2Q13563 968 aa14.4□□□□□ -0.1
XRN1-208ENST00000470537 CDC42BPBQ9Y5S2 1711 aa14.4□□□□□ -0.1
XRN1-208ENST00000470537 NCOA1Q15788 1441 aa14.4□□□□□ -0.1
XRN1-208ENST00000470537 SPAG9O60271 1321 aaKnown RBP14.4□□□□□ -0.1
XRN1-208ENST00000470537 ZMYM3Q14202 1370 aa14.39□□□□□ -0.11
XRN1-208ENST00000470537 ZNF777Q9ULD5 760 aaPredicted RBP14.39□□□□□ -0.11
XRN1-208ENST00000470537 ABCA6Q8N139 1617 aa14.39□□□□□ -0.11
XRN1-208ENST00000470537 ABCC1P33527 1531 aa14.38□□□□□ -0.11
XRN1-208ENST00000470537 CASKIN1Q8WXD9 1431 aa14.38□□□□□ -0.11
XRN1-208ENST00000470537 PREX2Q70Z35 1606 aa14.37□□□□□ -0.11
XRN1-208ENST00000470537 SPATA31D1Q6ZQQ2 1576 aa14.37□□□□□ -0.11
XRN1-208ENST00000470537 LTBP4Q8N2S1 1624 aa14.37□□□□□ -0.11
XRN1-208ENST00000470537 UBAP1LF5GYI3 381 aa14.36□□□□□ -0.11
XRN1-208ENST00000470537 PAK3O75914 559 aaPredicted RBP14.36□□□□□ -0.11
XRN1-208ENST00000470537 KIDINS220Q9ULH0 1771 aa14.34□□□□□ -0.11
XRN1-208ENST00000470537 CAMSAP1Q5T5Y3 1602 aa14.34□□□□□ -0.11
XRN1-208ENST00000470537 MROH2AA6NES4 1674 aa14.34□□□□□ -0.11
XRN1-208ENST00000470537 ITSN2Q9NZM3 1697 aa14.34□□□□□ -0.11
XRN1-208ENST00000470537 PLEKHH2Q8IVE3 1493 aa14.34□□□□□ -0.11
XRN1-208ENST00000470537 CFDP1Q9UEE9 299 aaPredicted RBP14.34□□□□□ -0.11
XRN1-208ENST00000470537 HNRNPMP52272 730 aaKnown RBP eCLIP14.33□□□□□ -0.12
XRN1-208ENST00000470537 NCKAP5LQ9HCH0 1330 aa14.33□□□□□ -0.12
XRN1-208ENST00000470537 KIAA1107Q9UPP5 1409 aa14.32□□□□□ -0.12
XRN1-208ENST00000470537 GGT6Q6P531 493 aa14.32□□□□□ -0.12
XRN1-208ENST00000470537 PLA2R1Q13018 1463 aa14.31□□□□□ -0.12
XRN1-208ENST00000470537 SAMD9LQ8IVG5 1584 aa14.3□□□□□ -0.12
XRN1-208ENST00000470537 ZNF335Q9H4Z2 1342 aaPredicted RBP14.3□□□□□ -0.12
XRN1-208ENST00000470537 FYCO1Q9BQS8 1478 aa14.3□□□□□ -0.12
XRN1-208ENST00000470537 CDC42BPAQ5VT25 1732 aa14.29□□□□□ -0.12
XRN1-208ENST00000470537 LRRIQ1Q96JM4 1722 aa14.29□□□□□ -0.12
XRN1-208ENST00000470537 GALR2O43603 387 aaPredicted RBP14.29□□□□□ -0.12
XRN1-208ENST00000470537 TOM1O60784 492 aa14.29□□□□□ -0.12
XRN1-208ENST00000470537 CCNB3Q8WWL7 1395 aa14.29□□□□□ -0.12
XRN1-208ENST00000470537 A2MP01023 1474 aa14.29□□□□□ -0.12
XRN1-208ENST00000470537 GPATCH8Q9UKJ3 1502 aaKnown RBP14.28□□□□□ -0.12
XRN1-208ENST00000470537 MNX1P50219 401 aaPredicted RBP14.27□□□□□ -0.13
XRN1-208ENST00000470537 SUPT6HQ7KZ85 1726 aaKnown RBP14.27□□□□□ -0.13
XRN1-208ENST00000470537 ATP7AQ04656 1500 aa14.26□□□□□ -0.13
XRN1-208ENST00000470537 SYCP2Q9BX26 1530 aa14.26□□□□□ -0.13
XRN1-208ENST00000470537 PTPRKQ15262 1439 aa14.26□□□□□ -0.13
XRN1-208ENST00000470537 PHF12Q96QT6 1004 aa14.26□□□□□ -0.13
XRN1-208ENST00000470537 TCOF1Q13428 1488 aaKnown RBP14.25□□□□□ -0.13
XRN1-208ENST00000470537 MTUS2Q5JR59 1369 aa14.24□□□□□ -0.13
XRN1-208ENST00000470537 RSPH4AQ5TD94 716 aa14.24□□□□□ -0.13
XRN1-208ENST00000470537 CEP170BQ9Y4F5 1589 aaPredicted RBP14.24□□□□□ -0.13
XRN1-208ENST00000470537 CLTCQ00610 1675 aaKnown RBP14.23□□□□□ -0.13
XRN1-208ENST00000470537 ZNF142P52746 1687 aaPredicted RBP14.23□□□□□ -0.13
XRN1-208ENST00000470537 ANKLE2Q86XL3 938 aa14.22□□□□□ -0.13
XRN1-208ENST00000470537 THEMISQ8N1K5 641 aaPredicted RBP14.22□□□□□ -0.13
XRN1-208ENST00000470537 MYO3AQ8NEV4 1616 aa14.22□□□□□ -0.13
XRN1-208ENST00000470537 PLXNC1O60486 1568 aa14.22□□□□□ -0.13
XRN1-208ENST00000470537 A2ML1A8K2U0 1454 aa14.21□□□□□ -0.13
XRN1-208ENST00000470537 PROM2Q8N271 834 aa14.21□□□□□ -0.13
XRN1-208ENST00000470537 RTEL1-TNFRSF6BF6WH68 1400 aa14.21□□□□□ -0.13
XRN1-208ENST00000470537 PIP4K2BP78356 416 aa14.2□□□□□ -0.14
XRN1-208ENST00000470537 INO80Q9ULG1 1556 aaPredicted RBP14.2□□□□□ -0.14
XRN1-208ENST00000470537 DHX29Q7Z478 1369 aaKnown RBP14.2□□□□□ -0.14
XRN1-208ENST00000470537 ADGBQ8N7X0 1667 aa14.2□□□□□ -0.14
XRN1-208ENST00000470537 WASHC2CQ9Y4E1 1318 aa14.19□□□□□ -0.14
XRN1-208ENST00000470537 CPS1P31327 1500 aa14.19□□□□□ -0.14
XRN1-208ENST00000470537 KIF3BO15066 747 aa14.18□□□□□ -0.14
XRN1-208ENST00000470537 HSPA1LP34931 641 aa14.17□□□□□ -0.14
XRN1-208ENST00000470537 TNRQ92752 1358 aa14.17□□□□□ -0.14
XRN1-208ENST00000470537 FAM135AQ9P2D6 1515 aa14.15□□□□□ -0.14
XRN1-208ENST00000470537 DNMT1P26358 1616 aaKnown RBP14.15□□□□□ -0.14
XRN1-208ENST00000470537 SHANK2Q9UPX8 1470 aa14.15□□□□□ -0.14
XRN1-208ENST00000470537 TSPY4P0CV99 314 aa14.15□□□□□ -0.14
XRN1-208ENST00000470537 TSPY10P0CW01 314 aa14.15□□□□□ -0.14
XRN1-208ENST00000470537 ZNF644Q9H582 1327 aaPredicted RBP14.14□□□□□ -0.15
XRN1-208ENST00000470537 FBXO31Q5XUX0 539 aaPredicted RBP14.13□□□□□ -0.15
XRN1-208ENST00000470537 PZPP20742 1482 aa14.12□□□□□ -0.15
XRN1-208ENST00000470537 NLRP1Q9C000 1473 aa14.12□□□□□ -0.15
XRN1-208ENST00000470537 MBD5Q9P267 1494 aa14.12□□□□□ -0.15
XRN1-208ENST00000470537 MIA2Q96PC5 1412 aa14.12□□□□□ -0.15
XRN1-208ENST00000470537 KDM5DQ9BY66 1539 aa14.1□□□□□ -0.15
XRN1-208ENST00000470537 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.1□□□□□ -0.15
XRN1-208ENST00000470537 POLR1AO95602 1720 aaPredicted RBP14.1□□□□□ -0.15
XRN1-208ENST00000470537 CEP162Q5TB80 1403 aa14.1□□□□□ -0.15
XRN1-208ENST00000470537 EHBP1L1Q8N3D4 1523 aa14.1□□□□□ -0.15
XRN1-208ENST00000470537 CCDC141Q6ZP82 1450 aa14.09□□□□□ -0.15
XRN1-208ENST00000470537 MED14O60244 1454 aa14.08□□□□□ -0.16
XRN1-208ENST00000470537 MED1Q15648 1581 aaPredicted RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms