RNA–Protein interactions for RNA: ENST00000470160.1

KDM3A-210, Transcript of lysine demethylase 3A, humanhuman

TSL 2

Gene KDM3A, Length 2,955 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-210ENST00000470160 KCNH8Q96L42 1107 aa10.19□□□□□ -0.78
KDM3A-210ENST00000470160 MROH1Q8NDA8 1641 aa10.19□□□□□ -0.78
KDM3A-210ENST00000470160 LMTK2Q8IWU2 1503 aa10.18□□□□□ -0.78
KDM3A-210ENST00000470160 SIN3AQ96ST3 1273 aa10.18□□□□□ -0.78
KDM3A-210ENST00000470160 HECW2Q9P2P5 1572 aa10.18□□□□□ -0.78
KDM3A-210ENST00000470160 TET3O43151 1660 aa10.18□□□□□ -0.78
KDM3A-210ENST00000470160 ZMYM4Q5VZL5 1548 aa10.18□□□□□ -0.78
KDM3A-210ENST00000470160 SCAPERQ9BY12 1400 aa10.17□□□□□ -0.78
KDM3A-210ENST00000470160 TONSLQ96HA7 1378 aa10.16□□□□□ -0.78
KDM3A-210ENST00000470160 REREQ9P2R6 1566 aa10.16□□□□□ -0.78
KDM3A-210ENST00000470160 UHRF1BP1Q6BDS2 1440 aa10.16□□□□□ -0.78
KDM3A-210ENST00000470160 DHX29Q7Z478 1369 aaKnown RBP10.15□□□□□ -0.78
KDM3A-210ENST00000470160 TRIM52Q96A61 297 aa10.15□□□□□ -0.78
KDM3A-210ENST00000470160 NUP155O75694 1391 aa10.15□□□□□ -0.78
KDM3A-210ENST00000470160 SPAG9O60271 1321 aaKnown RBP10.15□□□□□ -0.79
KDM3A-210ENST00000470160 FRMPD1Q5SYB0 1578 aa10.14□□□□□ -0.79
KDM3A-210ENST00000470160 SLC4A1APQ9BWU0 796 aaKnown RBP10.14□□□□□ -0.79
KDM3A-210ENST00000470160 KIF13AQ9H1H9 1805 aa10.14□□□□□ -0.79
KDM3A-210ENST00000470160 E9PCH4 1651 aa10.14□□□□□ -0.79
KDM3A-210ENST00000470160 POLR1AO95602 1720 aaPredicted RBP10.14□□□□□ -0.79
KDM3A-210ENST00000470160 ABCA6Q8N139 1617 aa10.13□□□□□ -0.79
KDM3A-210ENST00000470160 PTPRTO14522 1441 aa10.13□□□□□ -0.79
KDM3A-210ENST00000470160 PLA2R1Q13018 1463 aa10.13□□□□□ -0.79
KDM3A-210ENST00000470160 SPHKAPQ2M3C7 1700 aa10.12□□□□□ -0.79
KDM3A-210ENST00000470160 TRPM2O94759 1503 aa10.12□□□□□ -0.79
KDM3A-210ENST00000470160 CEP152O94986 1710 aa10.12□□□□□ -0.79
KDM3A-210ENST00000470160 LAMC1P11047 1609 aa10.12□□□□□ -0.79
KDM3A-210ENST00000470160 DIP2CQ9Y2E4 1556 aa10.12□□□□□ -0.79
KDM3A-210ENST00000470160 ZC3H13Q5T200 1668 aaKnown RBP10.12□□□□□ -0.79
KDM3A-210ENST00000470160 A2MP01023 1474 aa10.11□□□□□ -0.79
KDM3A-210ENST00000470160 PKD2Q13563 968 aa10.1□□□□□ -0.79
KDM3A-210ENST00000470160 EFCAB6Q5THR3 1501 aa10.09□□□□□ -0.79
KDM3A-210ENST00000470160 AFAP1Q8N556 730 aa10.09□□□□□ -0.79
KDM3A-210ENST00000470160 NEUROD1Q13562 356 aa10.09□□□□□ -0.79
KDM3A-210ENST00000470160 DIEXFQ68CQ4 756 aaKnown RBP10.09□□□□□ -0.79
KDM3A-210ENST00000470160 AGLP35573 1532 aa10.08□□□□□ -0.8
KDM3A-210ENST00000470160 SPATA31E1Q6ZUB1 1445 aa10.07□□□□□ -0.8
KDM3A-210ENST00000470160 RALGAPBQ86X10 1494 aa10.07□□□□□ -0.8
KDM3A-210ENST00000470160 L3MBTL2Q969R5 705 aa10.07□□□□□ -0.8
KDM3A-210ENST00000470160 TRPM1Q7Z4N2 1603 aa10.06□□□□□ -0.8
KDM3A-210ENST00000470160 CYB5RLQ6IPT4 315 aa10.06□□□□□ -0.8
KDM3A-210ENST00000470160 STAC3Q96MF2 364 aa10.05□□□□□ -0.8
KDM3A-210ENST00000470160 IFT172Q9UG01 1749 aa10.05□□□□□ -0.8
KDM3A-210ENST00000470160 KIAA1210Q9ULL0 1709 aa10.05□□□□□ -0.8
KDM3A-210ENST00000470160 ARHGAP31Q2M1Z3 1444 aa10.05□□□□□ -0.8
KDM3A-210ENST00000470160 KANK1Q14678 1352 aa10.04□□□□□ -0.8
KDM3A-210ENST00000470160 CLTCL1P53675 1640 aa10.04□□□□□ -0.8
KDM3A-210ENST00000470160 CCDC144AA2RUR9 1427 aa10.04□□□□□ -0.8
KDM3A-210ENST00000470160 FOXD1Q16676 465 aa10.04□□□□□ -0.8
KDM3A-210ENST00000470160 PIK3C2BO00750 1634 aa10.03□□□□□ -0.8
KDM3A-210ENST00000470160 CAMSAP1Q5T5Y3 1602 aa10.03□□□□□ -0.8
KDM3A-210ENST00000470160 ABCC3O15438 1527 aa10.03□□□□□ -0.8
KDM3A-210ENST00000470160 GPRASP1Q5JY77 1395 aa10.03□□□□□ -0.8
KDM3A-210ENST00000470160 KIF1BO60333 1816 aa10.02□□□□□ -0.81
KDM3A-210ENST00000470160 NBPF8Q3BBV2 869 aa10.01□□□□□ -0.81
KDM3A-210ENST00000470160 PRAG1Q86YV5 1406 aa10.01□□□□□ -0.81
KDM3A-210ENST00000470160 ARHGEF40Q8TER5 1519 aa10□□□□□ -0.81
KDM3A-210ENST00000470160 MADDQ8WXG6 1647 aa10□□□□□ -0.81
KDM3A-210ENST00000470160 CNTLNQ9NXG0 1405 aa10□□□□□ -0.81
KDM3A-210ENST00000470160 MYOM2P54296 1465 aa10□□□□□ -0.81
KDM3A-210ENST00000470160 PPP6R1Q9UPN7 881 aa9.99□□□□□ -0.81
KDM3A-210ENST00000470160 NOS1P29475 1434 aa9.99□□□□□ -0.81
KDM3A-210ENST00000470160 NRXN1Q9ULB1 1477 aa9.99□□□□□ -0.81
KDM3A-210ENST00000470160 ADGRB3O60242 1522 aa9.99□□□□□ -0.81
KDM3A-210ENST00000470160 ARID4BQ4LE39 1312 aaPredicted RBP9.99□□□□□ -0.81
KDM3A-210ENST00000470160 TSPOAP1O95153 1857 aa9.99□□□□□ -0.81
KDM3A-210ENST00000470160 SIGLEC1Q9BZZ2 1709 aa9.98□□□□□ -0.81
KDM3A-210ENST00000470160 FAM69CQ0P6D2 419 aa9.97□□□□□ -0.81
KDM3A-210ENST00000470160 IQGAP1P46940 1657 aa9.97□□□□□ -0.81
KDM3A-210ENST00000470160 EIF4G2P78344 907 aaKnown RBP eCLIP9.97□□□□□ -0.81
KDM3A-210ENST00000470160 YEATS2Q9ULM3 1422 aa9.97□□□□□ -0.81
KDM3A-210ENST00000470160 NPATQ14207 1427 aa9.96□□□□□ -0.81
KDM3A-210ENST00000470160 PPLO60437 1756 aa9.96□□□□□ -0.81
KDM3A-210ENST00000470160 KIF3BO15066 747 aa9.96□□□□□ -0.82
KDM3A-210ENST00000470160 MROH2AA6NES4 1674 aa9.96□□□□□ -0.82
KDM3A-210ENST00000470160 PREX1Q8TCU6 1659 aa9.95□□□□□ -0.82
KDM3A-210ENST00000470160 SYNMO15061 1565 aa9.95□□□□□ -0.82
KDM3A-210ENST00000470160 SETBP1Q9Y6X0 1596 aa9.94□□□□□ -0.82
KDM3A-210ENST00000470160 HSPA5P11021 654 aaKnown RBP9.94□□□□□ -0.82
KDM3A-210ENST00000470160 COL17A1Q9UMD9 1497 aaPredicted RBP9.94□□□□□ -0.82
KDM3A-210ENST00000470160 RAPGEF3O95398 923 aa9.93□□□□□ -0.82
KDM3A-210ENST00000470160 KDM5AP29375 1690 aaKnown RBP9.93□□□□□ -0.82
KDM3A-210ENST00000470160 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.93□□□□□ -0.822e-7■■□□□ 13.4
KDM3A-210ENST00000470160 MYO3AQ8NEV4 1616 aa9.92□□□□□ -0.82
KDM3A-210ENST00000470160 CCDC7Q96M83 1385 aa9.92□□□□□ -0.82
KDM3A-210ENST00000470160 ZFYVE9O95405 1425 aa9.92□□□□□ -0.82
KDM3A-210ENST00000470160 SPATA31D1Q6ZQQ2 1576 aa9.92□□□□□ -0.82
KDM3A-210ENST00000470160 USP47Q96K76 1375 aa9.91□□□□□ -0.82
KDM3A-210ENST00000470160 MIER1Q8N108 512 aa9.9□□□□□ -0.82
KDM3A-210ENST00000470160 BCL11AQ9H165 835 aa9.9□□□□□ -0.82
KDM3A-210ENST00000470160 WASHC2AQ641Q2 1341 aa9.9□□□□□ -0.82
KDM3A-210ENST00000470160 RPGRIP1LQ68CZ1 1315 aa9.9□□□□□ -0.82
KDM3A-210ENST00000470160 TMEM131LA2VDJ0 1609 aa9.9□□□□□ -0.83
KDM3A-210ENST00000470160 ROCK2O75116 1388 aaKnown RBP9.89□□□□□ -0.83
KDM3A-210ENST00000470160 UGGT1Q9NYU2 1555 aa9.88□□□□□ -0.83
KDM3A-210ENST00000470160 DCAF11Q8TEB1 546 aa9.88□□□□□ -0.83
KDM3A-210ENST00000470160 NEXMIFQ5QGS0 1516 aa9.88□□□□□ -0.83
KDM3A-210ENST00000470160 CCER2I3L3R5 266 aa9.88□□□□□ -0.83
KDM3A-210ENST00000470160 CLTCQ00610 1675 aaKnown RBP9.88□□□□□ -0.83
KDM3A-210ENST00000470160 ERVK-7P63135 1459 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms