RNA–Protein interactions for RNA: ENST00000469896.1

COMMD2-202, Transcript of COMM domain containing 2, humanhuman

TSL 1 (best)

Gene COMMD2, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-202ENST00000469896 ITSN2Q9NZM3 1697 aa18.92■□□□□ 0.62
COMMD2-202ENST00000469896 GGT6Q6P531 493 aa18.91■□□□□ 0.62
COMMD2-202ENST00000469896 SPAG9O60271 1321 aaKnown RBP18.91■□□□□ 0.62
COMMD2-202ENST00000469896 RNF17Q9BXT8 1623 aaKnown RBP18.89■□□□□ 0.61
COMMD2-202ENST00000469896 CDC42BPBQ9Y5S2 1711 aa18.88■□□□□ 0.61
COMMD2-202ENST00000469896 PREX2Q70Z35 1606 aa18.88■□□□□ 0.61
COMMD2-202ENST00000469896 THEMISQ8N1K5 641 aaPredicted RBP18.87■□□□□ 0.61
COMMD2-202ENST00000469896 SAMD9LQ8IVG5 1584 aa18.86■□□□□ 0.61
COMMD2-202ENST00000469896 NPHP4O75161 1426 aaPredicted RBP18.86■□□□□ 0.61
COMMD2-202ENST00000469896 A2MP01023 1474 aa18.85■□□□□ 0.61
COMMD2-202ENST00000469896 TNRQ92752 1358 aa18.85■□□□□ 0.61
COMMD2-202ENST00000469896 CAPN15O75808 1086 aa18.85■□□□□ 0.61
COMMD2-202ENST00000469896 LRRC7Q96NW7 1537 aa18.84■□□□□ 0.61
COMMD2-202ENST00000469896 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.84■□□□□ 0.61
COMMD2-202ENST00000469896 PLXNC1O60486 1568 aa18.83■□□□□ 0.6
COMMD2-202ENST00000469896 MED14O60244 1454 aa18.83■□□□□ 0.6
COMMD2-202ENST00000469896 SYNMO15061 1565 aa18.82■□□□□ 0.6
COMMD2-202ENST00000469896 ZNF777Q9ULD5 760 aaPredicted RBP18.82■□□□□ 0.6
COMMD2-202ENST00000469896 ATP7AQ04656 1500 aa18.8■□□□□ 0.6
COMMD2-202ENST00000469896 DSG3P32926 999 aa18.8■□□□□ 0.6
COMMD2-202ENST00000469896 EEA1Q15075 1411 aa18.79■□□□□ 0.6
COMMD2-202ENST00000469896 FAM135AQ9P2D6 1515 aa18.79■□□□□ 0.6
COMMD2-202ENST00000469896 DEPDC5O75140 1603 aa18.78■□□□□ 0.6
COMMD2-202ENST00000469896 SRCAPQ6ZRS2 3230 aa18.78■□□□□ 0.6
COMMD2-202ENST00000469896 SYCP2Q9BX26 1530 aa18.77■□□□□ 0.6
COMMD2-202ENST00000469896 SETD1AO15047 1707 aaKnown RBP18.77■□□□□ 0.59
COMMD2-202ENST00000469896 UPF1Q92900 1129 aaKnown RBP eCLIP18.76■□□□□ 0.59
COMMD2-202ENST00000469896 HNRNPMP52272 730 aaKnown RBP eCLIP18.75■□□□□ 0.59
COMMD2-202ENST00000469896 FBXO31Q5XUX0 539 aaPredicted RBP18.75■□□□□ 0.59
COMMD2-202ENST00000469896 NLRP1Q9C000 1473 aa18.75■□□□□ 0.59
COMMD2-202ENST00000469896 IQGAP1P46940 1657 aa18.75■□□□□ 0.59
COMMD2-202ENST00000469896 FAM135BQ49AJ0 1406 aa18.74■□□□□ 0.59
COMMD2-202ENST00000469896 UGGT1Q9NYU2 1555 aa18.74■□□□□ 0.59
COMMD2-202ENST00000469896 SLC4A1APQ9BWU0 796 aaKnown RBP18.74■□□□□ 0.59
COMMD2-202ENST00000469896 PZPP20742 1482 aa18.73■□□□□ 0.59
COMMD2-202ENST00000469896 INO80Q9ULG1 1556 aaPredicted RBP18.72■□□□□ 0.59
COMMD2-202ENST00000469896 KIAA1107Q9UPP5 1409 aa18.72■□□□□ 0.59
COMMD2-202ENST00000469896 PLEKHH2Q8IVE3 1493 aa18.71■□□□□ 0.59
COMMD2-202ENST00000469896 MIA2Q96PC5 1412 aa18.71■□□□□ 0.59
COMMD2-202ENST00000469896 CCDC18Q5T9S5 1454 aa18.69■□□□□ 0.58
COMMD2-202ENST00000469896 CDC42BPAQ5VT25 1732 aa18.69■□□□□ 0.58
COMMD2-202ENST00000469896 STRCP1A6NGW2 1772 aa18.68■□□□□ 0.58
COMMD2-202ENST00000469896 ADGBQ8N7X0 1667 aa18.67■□□□□ 0.58
COMMD2-202ENST00000469896 WASHC2CQ9Y4E1 1318 aa18.67■□□□□ 0.58
COMMD2-202ENST00000469896 ARHGAP35Q9NRY4 1499 aa18.66■□□□□ 0.58
COMMD2-202ENST00000469896 KDM5DQ9BY66 1539 aa18.66■□□□□ 0.58
COMMD2-202ENST00000469896 CFDP1Q9UEE9 299 aaPredicted RBP18.65■□□□□ 0.58
COMMD2-202ENST00000469896 UBTFP17480 764 aaKnown RBP18.64■□□□□ 0.57
COMMD2-202ENST00000469896 APLP2Q06481 763 aa18.63■□□□□ 0.57
COMMD2-202ENST00000469896 ZNF772Q68DY9 489 aaPredicted RBP18.63■□□□□ 0.57
COMMD2-202ENST00000469896 TRIM52Q96A61 297 aa18.63■□□□□ 0.57
COMMD2-202ENST00000469896 GPATCH8Q9UKJ3 1502 aaKnown RBP18.63■□□□□ 0.57
COMMD2-202ENST00000469896 KIF3BO15066 747 aa18.62■□□□□ 0.57
COMMD2-202ENST00000469896 SAMD1Q6SPF0 538 aaPredicted RBP18.62■□□□□ 0.57
COMMD2-202ENST00000469896 DHX29Q7Z478 1369 aaKnown RBP18.62■□□□□ 0.57
COMMD2-202ENST00000469896 JCADQ9P266 1359 aa18.61■□□□□ 0.57
COMMD2-202ENST00000469896 LRRIQ1Q96JM4 1722 aa18.6■□□□□ 0.57
COMMD2-202ENST00000469896 LRRC9Q6ZRR7 1453 aa18.58■□□□□ 0.57
COMMD2-202ENST00000469896 MYCNP04198 464 aaPredicted RBP18.58■□□□□ 0.56
COMMD2-202ENST00000469896 MEX3CQ5U5Q3 659 aaKnown RBP18.58■□□□□ 0.56
COMMD2-202ENST00000469896 SCAF11Q99590 1463 aaKnown RBP18.58■□□□□ 0.56
COMMD2-202ENST00000469896 RTEL1-TNFRSF6BF6WH68 1400 aa18.57■□□□□ 0.56
COMMD2-202ENST00000469896 CASKIN1Q8WXD9 1431 aa18.57■□□□□ 0.56
COMMD2-202ENST00000469896 ROBO1Q9Y6N7 1651 aa18.57■□□□□ 0.56
COMMD2-202ENST00000469896 ZNF219Q9P2Y4 722 aaPredicted RBP18.56■□□□□ 0.56
COMMD2-202ENST00000469896 CCNB3Q8WWL7 1395 aa18.55■□□□□ 0.56
COMMD2-202ENST00000469896 ZC3H13Q5T200 1668 aaKnown RBP18.55■□□□□ 0.56
COMMD2-202ENST00000469896 RXRBP28702 533 aa18.55■□□□□ 0.56
COMMD2-202ENST00000469896 TMEM94Q12767 1356 aa18.55■□□□□ 0.56
COMMD2-202ENST00000469896 SPATA31A6Q5VVP1 1343 aa18.52■□□□□ 0.56
COMMD2-202ENST00000469896 TXNDC2Q86VQ3 553 aa18.52■□□□□ 0.56
COMMD2-202ENST00000469896 EID1Q9Y6B2 187 aa18.52■□□□□ 0.56
COMMD2-202ENST00000469896 EHMT2Q96KQ7 1210 aa18.51■□□□□ 0.55
COMMD2-202ENST00000469896 XIRP1Q702N8 1843 aaKnown RBP18.51■□□□□ 0.55
COMMD2-202ENST00000469896 CDK12Q9NYV4 1490 aaPredicted RBP18.5■□□□□ 0.55
COMMD2-202ENST00000469896 ABCB7O75027 752 aa18.47■□□□□ 0.55
COMMD2-202ENST00000469896 LTKP29376 864 aa18.47■□□□□ 0.55
COMMD2-202ENST00000469896 PROSER2Q86WR7 435 aaPredicted RBP18.47■□□□□ 0.55
COMMD2-202ENST00000469896 FOXD4L1Q9NU39 408 aa18.47■□□□□ 0.55
COMMD2-202ENST00000469896 PHLPP1O60346 1717 aa18.46■□□□□ 0.55
COMMD2-202ENST00000469896 MSH6P52701 1360 aa18.46■□□□□ 0.55
COMMD2-202ENST00000469896 SLAIN2Q9P270 581 aa18.46■□□□□ 0.55
COMMD2-202ENST00000469896 MBD5Q9P267 1494 aa18.46■□□□□ 0.54
COMMD2-202ENST00000469896 KCNA6P17658 529 aa18.45■□□□□ 0.54
COMMD2-202ENST00000469896 FGD6Q6ZV73 1430 aa18.45■□□□□ 0.54
COMMD2-202ENST00000469896 ERVK-7P63135 1459 aa18.45■□□□□ 0.54
COMMD2-202ENST00000469896 FYCO1Q9BQS8 1478 aa18.45■□□□□ 0.54
COMMD2-202ENST00000469896 LRP6O75581 1613 aa18.44■□□□□ 0.54
COMMD2-202ENST00000469896 ARHGAP23Q9P227 1491 aa18.44■□□□□ 0.54
COMMD2-202ENST00000469896 ZNF644Q9H582 1327 aaPredicted RBP18.44■□□□□ 0.54
COMMD2-202ENST00000469896 SLIT1O75093 1534 aa18.44■□□□□ 0.54
COMMD2-202ENST00000469896 ZRANB1Q9UGI0 708 aa18.43■□□□□ 0.54
COMMD2-202ENST00000469896 MAP3K1Q13233 1512 aa18.43■□□□□ 0.54
COMMD2-202ENST00000469896 UBR1Q8IWV7 1749 aa18.41■□□□□ 0.54
COMMD2-202ENST00000469896 NCOA2Q15596 1464 aa18.4■□□□□ 0.54
COMMD2-202ENST00000469896 RBM33Q96EV2 1170 aaKnown RBP18.4■□□□□ 0.54
COMMD2-202ENST00000469896 ABCC3O15438 1527 aa18.39■□□□□ 0.54
COMMD2-202ENST00000469896 PRDM15P57071 1507 aaPredicted RBP18.39■□□□□ 0.54
COMMD2-202ENST00000469896 RSPH4AQ5TD94 716 aa18.39■□□□□ 0.53
COMMD2-202ENST00000469896 CCDC141Q6ZP82 1450 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms