RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 PLEKHH2Q8IVE3 1493 aa20.21■□□□□ 0.83
CBWD3-205ENST00000469687 PLXNC1O60486 1568 aa20.21■□□□□ 0.83
CBWD3-205ENST00000469687 PLA2R1Q13018 1463 aa20.19■□□□□ 0.82
CBWD3-205ENST00000469687 CCDC144AA2RUR9 1427 aa20.18■□□□□ 0.82
CBWD3-205ENST00000469687 ST20-MTHFSA0A0A6YYL1 179 aa20.18■□□□□ 0.82
CBWD3-205ENST00000469687 IRX6P78412 446 aaPredicted RBP20.17■□□□□ 0.82
CBWD3-205ENST00000469687 IQGAP3Q86VI3 1631 aa20.16■□□□□ 0.82
CBWD3-205ENST00000469687 PLCH2O75038 1416 aa20.16■□□□□ 0.82
CBWD3-205ENST00000469687 RGL3Q3MIN7 710 aa20.16■□□□□ 0.82
CBWD3-205ENST00000469687 ROCK2O75116 1388 aaKnown RBP20.14■□□□□ 0.82
CBWD3-205ENST00000469687 TRPM1Q7Z4N2 1603 aa20.14■□□□□ 0.81
CBWD3-205ENST00000469687 ARID4BQ4LE39 1312 aaPredicted RBP20.14■□□□□ 0.81
CBWD3-205ENST00000469687 DUOX2Q9NRD8 1548 aa20.13■□□□□ 0.81
CBWD3-205ENST00000469687 UHRF1BP1LA0JNW5 1464 aa20.13■□□□□ 0.81
CBWD3-205ENST00000469687 PRAG1Q86YV5 1406 aa20.13■□□□□ 0.81
CBWD3-205ENST00000469687 TRAPPC8Q9Y2L5 1435 aa20.13■□□□□ 0.81
CBWD3-205ENST00000469687 ABCC1P33527 1531 aa20.12■□□□□ 0.81
CBWD3-205ENST00000469687 A2MP01023 1474 aa20.11■□□□□ 0.81
CBWD3-205ENST00000469687 ZBED9Q6R2W3 1325 aa20.11■□□□□ 0.81
CBWD3-205ENST00000469687 NBPF1Q3BBV0 1214 aa20.1■□□□□ 0.81
CBWD3-205ENST00000469687 EFCAB2Q5VUJ9 269 aa20.1■□□□□ 0.81
CBWD3-205ENST00000469687 MAGI2Q86UL8 1455 aa20.1■□□□□ 0.81
CBWD3-205ENST00000469687 ERBINQ96RT1 1412 aa20.08■□□□□ 0.81
CBWD3-205ENST00000469687 E9PCH4 1651 aa20.08■□□□□ 0.8
CBWD3-205ENST00000469687 AFAP1Q8N556 730 aa20.04■□□□□ 0.8
CBWD3-205ENST00000469687 SENP3-EIF4A1A0A087X0R7 540 aa20.04■□□□□ 0.8
CBWD3-205ENST00000469687 ATP10AO60312 1499 aa20.02■□□□□ 0.79
CBWD3-205ENST00000469687 GPRASP1Q5JY77 1395 aa20.01■□□□□ 0.79
CBWD3-205ENST00000469687 ZFYVE16Q7Z3T8 1539 aa20.01■□□□□ 0.79
CBWD3-205ENST00000469687 SPAG9O60271 1321 aaKnown RBP20■□□□□ 0.79
CBWD3-205ENST00000469687 PRDM15P57071 1507 aaPredicted RBP19.99■□□□□ 0.79
CBWD3-205ENST00000469687 PNISRQ8TF01 805 aaKnown RBP19.98■□□□□ 0.79
CBWD3-205ENST00000469687 WDR7Q9Y4E6 1490 aa19.98■□□□□ 0.79
CBWD3-205ENST00000469687 LAMC1P11047 1609 aa19.97■□□□□ 0.79
CBWD3-205ENST00000469687 TMC1Q8TDI8 760 aa19.97■□□□□ 0.79
CBWD3-205ENST00000469687 ARAP3Q8WWN8 1544 aa19.96■□□□□ 0.79
CBWD3-205ENST00000469687 DISP3Q9P2K9 1392 aa19.95■□□□□ 0.78
CBWD3-205ENST00000469687 EIF2AK4Q9P2K8 1649 aaKnown RBP19.95■□□□□ 0.78
CBWD3-205ENST00000469687 TESK2Q96S53 571 aa19.95■□□□□ 0.78
CBWD3-205ENST00000469687 ABCA9Q8IUA7 1624 aa19.94■□□□□ 0.78
CBWD3-205ENST00000469687 COL17A1Q9UMD9 1497 aaPredicted RBP19.94■□□□□ 0.78
CBWD3-205ENST00000469687 RTEL1-TNFRSF6BF6WH68 1400 aa19.94■□□□□ 0.78
CBWD3-205ENST00000469687 FANCAO15360 1455 aa19.93■□□□□ 0.78
CBWD3-205ENST00000469687 MYBBP1AQ9BQG0 1328 aaKnown RBP19.93■□□□□ 0.78
CBWD3-205ENST00000469687 RNF17Q9BXT8 1623 aaKnown RBP19.92■□□□□ 0.78
CBWD3-205ENST00000469687 DEPDC5O75140 1603 aa19.92■□□□□ 0.78
CBWD3-205ENST00000469687 SPHKAPQ2M3C7 1700 aa19.91■□□□□ 0.78
CBWD3-205ENST00000469687 SMG6Q86US8 1419 aaKnown RBP19.91■□□□□ 0.78
CBWD3-205ENST00000469687 ATP7AQ04656 1500 aa19.91■□□□□ 0.78
CBWD3-205ENST00000469687 RALBP1Q15311 655 aa19.91■□□□□ 0.78
CBWD3-205ENST00000469687 RBM19Q9Y4C8 960 aaKnown RBP19.91■□□□□ 0.78
CBWD3-205ENST00000469687 INO80Q9ULG1 1556 aaPredicted RBP19.91■□□□□ 0.78
CBWD3-205ENST00000469687 PER1O15534 1290 aaPredicted RBP19.9■□□□□ 0.78
CBWD3-205ENST00000469687 BRD4O60885 1362 aaPredicted RBP19.89■□□□□ 0.78
CBWD3-205ENST00000469687 LRPPRCP42704 1394 aaKnown RBP19.89■□□□□ 0.78
CBWD3-205ENST00000469687 TRPM2O94759 1503 aa19.89■□□□□ 0.78
CBWD3-205ENST00000469687 CEP152O94986 1710 aa19.89■□□□□ 0.77
CBWD3-205ENST00000469687 CLTCL1P53675 1640 aa19.89■□□□□ 0.77
CBWD3-205ENST00000469687 MADDQ8WXG6 1647 aa19.89■□□□□ 0.77
CBWD3-205ENST00000469687 KTN1Q86UP2 1357 aaKnown RBP19.88■□□□□ 0.77
CBWD3-205ENST00000469687 PARD3Q8TEW0 1356 aa19.88■□□□□ 0.77
CBWD3-205ENST00000469687 ERICH6BQ5W0A0 696 aa19.88■□□□□ 0.77
CBWD3-205ENST00000469687 PPP4R2Q9NY27 417 aa19.88■□□□□ 0.77
CBWD3-205ENST00000469687 NUDCQ9Y266 331 aa19.87■□□□□ 0.77
CBWD3-205ENST00000469687 ADGRL1O94910 1474 aa19.87■□□□□ 0.77
CBWD3-205ENST00000469687 SCAPERQ9BY12 1400 aa19.87■□□□□ 0.77
CBWD3-205ENST00000469687 TET3O43151 1660 aa19.86■□□□□ 0.77
CBWD3-205ENST00000469687 ASXL2Q76L83 1435 aa19.86■□□□□ 0.77
CBWD3-205ENST00000469687 B4GALNT3Q6L9W6 998 aa19.85■□□□□ 0.77
CBWD3-205ENST00000469687 MYT1LQ9UL68 1186 aa19.85■□□□□ 0.77
CBWD3-205ENST00000469687 PTPRTO14522 1441 aa19.85■□□□□ 0.77
CBWD3-205ENST00000469687 KIF3BO15066 747 aa19.84■□□□□ 0.77
CBWD3-205ENST00000469687 CC2D1BQ5T0F9 858 aaKnown RBP19.84■□□□□ 0.77
CBWD3-205ENST00000469687 VWDEQ8N2E2 1590 aa19.83■□□□□ 0.77
CBWD3-205ENST00000469687 PANK3Q9H999 370 aa19.83■□□□□ 0.77
CBWD3-205ENST00000469687 IQGAP1P46940 1657 aa19.83■□□□□ 0.76
CBWD3-205ENST00000469687 TMF1P82094 1093 aa19.82■□□□□ 0.76
CBWD3-205ENST00000469687 NLRP13Q86W25 1043 aa19.82■□□□□ 0.76
CBWD3-205ENST00000469687 MROH1Q8NDA8 1641 aa19.82■□□□□ 0.76
CBWD3-205ENST00000469687 UGGT1Q9NYU2 1555 aa19.8■□□□□ 0.76
CBWD3-205ENST00000469687 KIDINS220Q9ULH0 1771 aa19.79■□□□□ 0.76
CBWD3-205ENST00000469687 KANK1Q14678 1352 aa19.78■□□□□ 0.76
CBWD3-205ENST00000469687 SALL2Q9Y467 1007 aaPredicted RBP19.78■□□□□ 0.76
CBWD3-205ENST00000469687 RNF123Q5XPI4 1314 aa19.78■□□□□ 0.76
CBWD3-205ENST00000469687 WASHC2CQ9Y4E1 1318 aa19.73■□□□□ 0.75
CBWD3-205ENST00000469687 SCAF11Q99590 1463 aaKnown RBP19.73■□□□□ 0.75
CBWD3-205ENST00000469687 PPRC1Q5VV67 1664 aaKnown RBP19.72■□□□□ 0.75
CBWD3-205ENST00000469687 EFCAB6Q5THR3 1501 aa19.71■□□□□ 0.75
CBWD3-205ENST00000469687 KIF1BO60333 1816 aa19.71■□□□□ 0.75
CBWD3-205ENST00000469687 MROH2AA6NES4 1674 aa19.71■□□□□ 0.74
CBWD3-205ENST00000469687 CFAP65Q6ZU64 1925 aaKnown RBP19.7■□□□□ 0.74
CBWD3-205ENST00000469687 ZNF518AQ6AHZ1 1483 aa19.69■□□□□ 0.74
CBWD3-205ENST00000469687 ABCA6Q8N139 1617 aa19.69■□□□□ 0.74
CBWD3-205ENST00000469687 MAP3K4Q9Y6R4 1608 aa19.69■□□□□ 0.74
CBWD3-205ENST00000469687 MYOM1P52179 1685 aa19.68■□□□□ 0.74
CBWD3-205ENST00000469687 ADGRF5Q8IZF2 1346 aa19.68■□□□□ 0.74
CBWD3-205ENST00000469687 KIAA1210Q9ULL0 1709 aa19.68■□□□□ 0.74
CBWD3-205ENST00000469687 CFAP70Q5T0N1 1121 aa19.68■□□□□ 0.74
CBWD3-205ENST00000469687 IFT172Q9UG01 1749 aa19.67■□□□□ 0.74
CBWD3-205ENST00000469687 OSCARQ8IYS5 282 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms