RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 ANKRD30BQ9BXX2 1392 aa16.45■□□□□ 0.22
USP11-206ENST00000469080 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.45■□□□□ 0.22
USP11-206ENST00000469080 NCOA1Q15788 1441 aa16.44■□□□□ 0.22
USP11-206ENST00000469080 LRRIQ1Q96JM4 1722 aa16.44■□□□□ 0.22
USP11-206ENST00000469080 CCDC7Q96M83 1385 aa16.44■□□□□ 0.22
USP11-206ENST00000469080 BRPF3Q9ULD4 1205 aa16.43■□□□□ 0.22
USP11-206ENST00000469080 ARHGAP5Q13017 1502 aa16.42■□□□□ 0.22
USP11-206ENST00000469080 RAPGEF6Q8TEU7 1601 aa16.42■□□□□ 0.22
USP11-206ENST00000469080 KIF14Q15058 1648 aa16.41■□□□□ 0.22
USP11-206ENST00000469080 NEUROD2Q15784 382 aa16.41■□□□□ 0.22
USP11-206ENST00000469080 STK26Q9P289 416 aa16.4■□□□□ 0.22
USP11-206ENST00000469080 STAG3Q9UJ98 1225 aa16.4■□□□□ 0.22
USP11-206ENST00000469080 RAPGEF3O95398 923 aa16.38■□□□□ 0.21
USP11-206ENST00000469080 CCDC144AA2RUR9 1427 aa16.37■□□□□ 0.21
USP11-206ENST00000469080 ZBTB47Q9UFB7 747 aaPredicted RBP16.37■□□□□ 0.21
USP11-206ENST00000469080 PDE4CQ08493 712 aa16.36■□□□□ 0.21
USP11-206ENST00000469080 AKNAQ7Z591 1439 aa16.36■□□□□ 0.21
USP11-206ENST00000469080 RSPH6AQ9H0K4 717 aa16.36■□□□□ 0.21
USP11-206ENST00000469080 PANK3Q9H999 370 aa16.36■□□□□ 0.21
USP11-206ENST00000469080 TRAK1Q9UPV9 953 aa16.35■□□□□ 0.21
USP11-206ENST00000469080 NEFMP07197 916 aa16.34■□□□□ 0.21
USP11-206ENST00000469080 KIAA1107Q9UPP5 1409 aa16.34■□□□□ 0.21
USP11-206ENST00000469080 NPM2Q86SE8 214 aaKnown RBP16.33■□□□□ 0.21
USP11-206ENST00000469080 TMEM132EQ6IEE7 984 aa16.33■□□□□ 0.2
USP11-206ENST00000469080 ANP32AP39687 249 aaKnown RBP16.33■□□□□ 0.2
USP11-206ENST00000469080 SCAPERQ9BY12 1400 aa16.33■□□□□ 0.2
USP11-206ENST00000469080 KNSTRNQ9Y448 316 aa16.31■□□□□ 0.2
USP11-206ENST00000469080 PLEKHH2Q8IVE3 1493 aa16.31■□□□□ 0.2
USP11-206ENST00000469080 CCDC146Q8IYE0 955 aa16.31■□□□□ 0.2
USP11-206ENST00000469080 CFAP70Q5T0N1 1121 aa16.3■□□□□ 0.2
USP11-206ENST00000469080 LAS1LQ9Y4W2 734 aaKnown RBP16.3■□□□□ 0.2
USP11-206ENST00000469080 TMF1P82094 1093 aa16.28■□□□□ 0.2
USP11-206ENST00000469080 RBM10P98175 930 aaKnown RBP16.28■□□□□ 0.2
USP11-206ENST00000469080 ROCK1Q13464 1354 aa16.28■□□□□ 0.2
USP11-206ENST00000469080 CNTLNQ9NXG0 1405 aa16.28■□□□□ 0.2
USP11-206ENST00000469080 DENND4BO75064 1496 aaPredicted RBP16.28■□□□□ 0.2
USP11-206ENST00000469080 PLIN1O60240 522 aa16.28■□□□□ 0.2
USP11-206ENST00000469080 WDR43Q15061 677 aaKnown RBP eCLIP16.27■□□□□ 0.2
USP11-206ENST00000469080 WASHC2CQ9Y4E1 1318 aa16.27■□□□□ 0.19
USP11-206ENST00000469080 RPRD2Q5VT52 1461 aaKnown RBP16.26■□□□□ 0.19
USP11-206ENST00000469080 TCOF1Q13428 1488 aaKnown RBP16.26■□□□□ 0.19
USP11-206ENST00000469080 PPM1GO15355 546 aaPredicted RBP16.26■□□□□ 0.19
USP11-206ENST00000469080 RSPH4AQ5TD94 716 aa16.25■□□□□ 0.19
USP11-206ENST00000469080 AEBP2Q6ZN18 517 aaPredicted RBP16.25■□□□□ 0.19
USP11-206ENST00000469080 CLASP1Q7Z460 1538 aa16.25■□□□□ 0.19
USP11-206ENST00000469080 ARID4BQ4LE39 1312 aaPredicted RBP16.25■□□□□ 0.19
USP11-206ENST00000469080 ABCA8O94911 1581 aa16.24■□□□□ 0.19
USP11-206ENST00000469080 CDCA7LQ96GN5 454 aa16.24■□□□□ 0.19
USP11-206ENST00000469080 PZPP20742 1482 aa16.24■□□□□ 0.19
USP11-206ENST00000469080 SYCP2Q9BX26 1530 aa16.23■□□□□ 0.19
USP11-206ENST00000469080 NUTM2FA1L443 756 aa16.22■□□□□ 0.19
USP11-206ENST00000469080 IPO9Q96P70 1041 aaKnown RBP16.22■□□□□ 0.19
USP11-206ENST00000469080 TRAPPC8Q9Y2L5 1435 aa16.21■□□□□ 0.19
USP11-206ENST00000469080 FGD1P98174 961 aa16.21■□□□□ 0.18
USP11-206ENST00000469080 ESF1Q9H501 851 aaKnown RBP16.21■□□□□ 0.18
USP11-206ENST00000469080 CFAP65Q6ZU64 1925 aaKnown RBP16.2■□□□□ 0.18
USP11-206ENST00000469080 BCL11BQ9C0K0 894 aaPredicted RBP16.19■□□□□ 0.18
USP11-206ENST00000469080 CCDC141Q6ZP82 1450 aa16.19■□□□□ 0.18
USP11-206ENST00000469080 SOX12O15370 315 aa16.19■□□□□ 0.18
USP11-206ENST00000469080 PDIA4P13667 645 aaKnown RBP16.19■□□□□ 0.18
USP11-206ENST00000469080 KANK1Q14678 1352 aa16.19■□□□□ 0.18
USP11-206ENST00000469080 RRP7AQ9Y3A4 280 aaKnown RBP16.18■□□□□ 0.18
USP11-206ENST00000469080 FAM69CQ0P6D2 419 aa16.18■□□□□ 0.18
USP11-206ENST00000469080 HSP90AA2PQ14568 343 aaPredicted RBP16.17■□□□□ 0.18
USP11-206ENST00000469080 SHROOM2Q13796 1616 aa16.17■□□□□ 0.18
USP11-206ENST00000469080 AAMPQ13685 434 aa16.17■□□□□ 0.18
USP11-206ENST00000469080 KTN1Q86UP2 1357 aaKnown RBP16.16■□□□□ 0.18
USP11-206ENST00000469080 CANXP27824 592 aaKnown RBP16.16■□□□□ 0.18
USP11-206ENST00000469080 SKAP1Q86WV1 359 aa16.16■□□□□ 0.18
USP11-206ENST00000469080 DNMT1P26358 1616 aaKnown RBP16.16■□□□□ 0.18
USP11-206ENST00000469080 ABCC2Q92887 1545 aa16.15■□□□□ 0.18
USP11-206ENST00000469080 SRPK2P78362 688 aaKnown RBP16.15■□□□□ 0.18
USP11-206ENST00000469080 PPP4R2Q9NY27 417 aa16.14■□□□□ 0.17
USP11-206ENST00000469080 POGKQ9P215 609 aa16.13■□□□□ 0.17
USP11-206ENST00000469080 ADGRF5Q8IZF2 1346 aa16.12■□□□□ 0.17
USP11-206ENST00000469080 PNISRQ8TF01 805 aaKnown RBP16.12■□□□□ 0.17
USP11-206ENST00000469080 NLRP13Q86W25 1043 aa16.11■□□□□ 0.17
USP11-206ENST00000469080 ADAMTS8Q9UP79 889 aa16.11■□□□□ 0.17
USP11-206ENST00000469080 MYBBP1AQ9BQG0 1328 aaKnown RBP16.11■□□□□ 0.17
USP11-206ENST00000469080 SLC12A5Q9H2X9 1139 aa16.1■□□□□ 0.17
USP11-206ENST00000469080 DISP3Q9P2K9 1392 aa16.1■□□□□ 0.17
USP11-206ENST00000469080 TEX14Q8IWB6 1497 aa16.1■□□□□ 0.17
USP11-206ENST00000469080 U2SURPO15042 1029 aaKnown RBP16.1■□□□□ 0.17
USP11-206ENST00000469080 NUDCQ9Y266 331 aa16.1■□□□□ 0.17
USP11-206ENST00000469080 MINK1Q8N4C8 1332 aaPredicted RBP16.1■□□□□ 0.17
USP11-206ENST00000469080 ZBED9Q6R2W3 1325 aa16.09■□□□□ 0.17
USP11-206ENST00000469080 EXOC6Q8TAG9 804 aa16.09■□□□□ 0.17
USP11-206ENST00000469080 NAP1L5Q96NT1 182 aaPredicted RBP16.09■□□□□ 0.17
USP11-206ENST00000469080 TRHP20396 242 aaPredicted RBP16.09■□□□□ 0.17
USP11-206ENST00000469080 FRAT1Q92837 279 aaPredicted RBP16.09■□□□□ 0.17
USP11-206ENST00000469080 ASXL2Q76L83 1435 aa16.08■□□□□ 0.16
USP11-206ENST00000469080 GSE1Q14687 1217 aa16.07■□□□□ 0.16
USP11-206ENST00000469080 FBXO31Q5XUX0 539 aaPredicted RBP16.07■□□□□ 0.16
USP11-206ENST00000469080 CABP2Q9NPB3 220 aa16.07■□□□□ 0.16
USP11-206ENST00000469080 ABCC10Q5T3U5 1492 aa16.07■□□□□ 0.16
USP11-206ENST00000469080 RALBP1Q15311 655 aa16.07■□□□□ 0.16
USP11-206ENST00000469080 MORC1Q86VD1 984 aa16.07■□□□□ 0.16
USP11-206ENST00000469080 RCAN3Q9UKA8 241 aa16.07■□□□□ 0.16
USP11-206ENST00000469080 BCL2L13Q9BXK5 485 aa16.06■□□□□ 0.16
USP11-206ENST00000469080 MBD5Q9P267 1494 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms