RNA–Protein interactions for RNA: ENST00000468878.1

TRIM46-207, Transcript of tripartite motif containing 46, humanhuman

TSL 2

Gene TRIM46, Length 3,318 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM46-207ENST00000468878 NBR1Q14596 966 aa23.26■■□□□ 1.31
TRIM46-207ENST00000468878 SPATA31E1Q6ZUB1 1445 aa23.25■■□□□ 1.31
TRIM46-207ENST00000468878 SAFB2Q14151 953 aaKnown RBP eCLIP23.24■■□□□ 1.31
TRIM46-207ENST00000468878 RSPH4AQ5TD94 716 aa23.24■■□□□ 1.31
TRIM46-207ENST00000468878 KTN1Q86UP2 1357 aaKnown RBP23.24■■□□□ 1.31
TRIM46-207ENST00000468878 MYBBP1AQ9BQG0 1328 aaKnown RBP23.24■■□□□ 1.31
TRIM46-207ENST00000468878 NPM1P06748 294 aaKnown RBP eCLIP23.23■■□□□ 1.31
TRIM46-207ENST00000468878 NEUROD2Q15784 382 aa23.23■■□□□ 1.31
TRIM46-207ENST00000468878 WDR43Q15061 677 aaKnown RBP eCLIP23.22■■□□□ 1.31
TRIM46-207ENST00000468878 CCDC146Q8IYE0 955 aa23.22■■□□□ 1.31
TRIM46-207ENST00000468878 DHX29Q7Z478 1369 aaKnown RBP23.22■■□□□ 1.31
TRIM46-207ENST00000468878 EXOC6Q8TAG9 804 aa23.21■■□□□ 1.31
TRIM46-207ENST00000468878 NLRP13Q86W25 1043 aa23.2■■□□□ 1.3
TRIM46-207ENST00000468878 CCDC141Q6ZP82 1450 aa23.2■■□□□ 1.3
TRIM46-207ENST00000468878 MSH5O43196 834 aa23.2■■□□□ 1.3
TRIM46-207ENST00000468878 SKAP1Q86WV1 359 aa23.2■■□□□ 1.3
TRIM46-207ENST00000468878 SYCP2Q9BX26 1530 aa23.2■■□□□ 1.3
TRIM46-207ENST00000468878 RALBP1Q15311 655 aa23.19■■□□□ 1.3
TRIM46-207ENST00000468878 RCAN3Q9UKA8 241 aa23.17■■□□□ 1.3
TRIM46-207ENST00000468878 ITSN2Q9NZM3 1697 aa23.16■■□□□ 1.3
TRIM46-207ENST00000468878 ERCC6L2Q5T890 1561 aa23.15■■□□□ 1.3
TRIM46-207ENST00000468878 CFAP70Q5T0N1 1121 aa23.15■■□□□ 1.3
TRIM46-207ENST00000468878 ABCC10Q5T3U5 1492 aa23.14■■□□□ 1.3
TRIM46-207ENST00000468878 DISP3Q9P2K9 1392 aa23.14■■□□□ 1.29
TRIM46-207ENST00000468878 TRAK1Q9UPV9 953 aa23.12■■□□□ 1.29
TRIM46-207ENST00000468878 ADAMTS8Q9UP79 889 aa23.1■■□□□ 1.29
TRIM46-207ENST00000468878 MBD5Q9P267 1494 aa23.1■■□□□ 1.29
TRIM46-207ENST00000468878 SCAPERQ9BY12 1400 aa23.09■■□□□ 1.29
TRIM46-207ENST00000468878 ADGRL2O95490 1459 aa23.08■■□□□ 1.29
TRIM46-207ENST00000468878 FAM135AQ9P2D6 1515 aa23.08■■□□□ 1.29
TRIM46-207ENST00000468878 BCORL1Q5H9F3 1711 aa23.08■■□□□ 1.29
TRIM46-207ENST00000468878 TMEM132EQ6IEE7 984 aa23.08■■□□□ 1.28
TRIM46-207ENST00000468878 TRAPPC8Q9Y2L5 1435 aa23.08■■□□□ 1.28
TRIM46-207ENST00000468878 ABCA8O94911 1581 aa23.07■■□□□ 1.28
TRIM46-207ENST00000468878 CDC42BPAQ5VT25 1732 aa23.06■■□□□ 1.28
TRIM46-207ENST00000468878 STK26Q9P289 416 aa23.05■■□□□ 1.28
TRIM46-207ENST00000468878 ANP32AP39687 249 aaKnown RBP23.04■■□□□ 1.28
TRIM46-207ENST00000468878 RRP1P56182 461 aaKnown RBP23.04■■□□□ 1.28
TRIM46-207ENST00000468878 TESK2Q96S53 571 aa23.04■■□□□ 1.28
TRIM46-207ENST00000468878 PLPPR3Q6T4P5 718 aa23.03■■□□□ 1.28
TRIM46-207ENST00000468878 RALGAPBQ86X10 1494 aa23.02■■□□□ 1.28
TRIM46-207ENST00000468878 ARID4BQ4LE39 1312 aaPredicted RBP23.01■■□□□ 1.27
TRIM46-207ENST00000468878 SAMD9LQ8IVG5 1584 aa23■■□□□ 1.27
TRIM46-207ENST00000468878 RRP7AQ9Y3A4 280 aaKnown RBP23■■□□□ 1.27
TRIM46-207ENST00000468878 PRAG1Q86YV5 1406 aa23■■□□□ 1.27
TRIM46-207ENST00000468878 CANXP27824 592 aaKnown RBP23■■□□□ 1.27
TRIM46-207ENST00000468878 BRD4O60885 1362 aaPredicted RBP22.99■■□□□ 1.27
TRIM46-207ENST00000468878 KANK1Q14678 1352 aa22.99■■□□□ 1.27
TRIM46-207ENST00000468878 PER1O15534 1290 aaPredicted RBP22.98■■□□□ 1.27
TRIM46-207ENST00000468878 ERICH6BQ5W0A0 696 aa22.98■■□□□ 1.27
TRIM46-207ENST00000468878 ADGBQ8N7X0 1667 aa22.98■■□□□ 1.27
TRIM46-207ENST00000468878 CRBNQ96SW2 442 aa22.97■■□□□ 1.27
TRIM46-207ENST00000468878 SMG6Q86US8 1419 aaKnown RBP22.97■■□□□ 1.27
TRIM46-207ENST00000468878 ERBINQ96RT1 1412 aa22.97■■□□□ 1.27
TRIM46-207ENST00000468878 RAPGEF3O95398 923 aa22.97■■□□□ 1.27
TRIM46-207ENST00000468878 TTC37Q6PGP7 1564 aa22.97■■□□□ 1.27
TRIM46-207ENST00000468878 APAF1O14727 1248 aa22.96■■□□□ 1.27
TRIM46-207ENST00000468878 A2MP01023 1474 aa22.95■■□□□ 1.27
TRIM46-207ENST00000468878 RGS3P49796 1198 aa22.95■■□□□ 1.27
TRIM46-207ENST00000468878 ADGRF5Q8IZF2 1346 aa22.95■■□□□ 1.26
TRIM46-207ENST00000468878 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.95■■□□□ 1.26
TRIM46-207ENST00000468878 C20orf194Q5TEA3 1177 aa22.95■■□□□ 1.26
TRIM46-207ENST00000468878 PLA2R1Q13018 1463 aa22.94■■□□□ 1.26
TRIM46-207ENST00000468878 PPP2R1AP30153 589 aa22.94■■□□□ 1.26
TRIM46-207ENST00000468878 MLECQ14165 292 aa22.94■■□□□ 1.26
TRIM46-207ENST00000468878 PAK3O75914 559 aaPredicted RBP22.94■■□□□ 1.26
TRIM46-207ENST00000468878 ARHGEF12Q9NZN5 1544 aa22.94■■□□□ 1.26
TRIM46-207ENST00000468878 WASHC2CQ9Y4E1 1318 aa22.93■■□□□ 1.26
TRIM46-207ENST00000468878 KDM5CP41229 1560 aa22.93■■□□□ 1.26
TRIM46-207ENST00000468878 CDCA8Q53HL2 280 aa22.92■■□□□ 1.26
TRIM46-207ENST00000468878 FRAT1Q92837 279 aaPredicted RBP22.92■■□□□ 1.26
TRIM46-207ENST00000468878 ZBTB47Q9UFB7 747 aaPredicted RBP22.92■■□□□ 1.26
TRIM46-207ENST00000468878 STAG3Q9UJ98 1225 aa22.92■■□□□ 1.26
TRIM46-207ENST00000468878 SHANK2Q9UPX8 1470 aa22.92■■□□□ 1.26
TRIM46-207ENST00000468878 PRKCSHP14314 528 aaPredicted RBP22.92■■□□□ 1.26
TRIM46-207ENST00000468878 LAS1LQ9Y4W2 734 aaKnown RBP22.91■■□□□ 1.26
TRIM46-207ENST00000468878 CHD1O14646 1710 aa22.91■■□□□ 1.26
TRIM46-207ENST00000468878 UHRF1BP1Q6BDS2 1440 aa22.91■■□□□ 1.26
TRIM46-207ENST00000468878 SLC12A5Q9H2X9 1139 aa22.89■■□□□ 1.26
TRIM46-207ENST00000468878 PLCH2O75038 1416 aa22.88■■□□□ 1.25
TRIM46-207ENST00000468878 NOP58Q9Y2X3 529 aaKnown RBP22.88■■□□□ 1.25
TRIM46-207ENST00000468878 PPM1GO15355 546 aaPredicted RBP22.87■■□□□ 1.25
TRIM46-207ENST00000468878 DEKP35659 375 aaKnown RBP22.87■■□□□ 1.25
TRIM46-207ENST00000468878 BCL2L13Q9BXK5 485 aa22.87■■□□□ 1.25
TRIM46-207ENST00000468878 CYB5RLQ6IPT4 315 aa22.87■■□□□ 1.25
TRIM46-207ENST00000468878 MORC1Q86VD1 984 aa22.87■■□□□ 1.25
TRIM46-207ENST00000468878 CDC42BPBQ9Y5S2 1711 aa22.85■■□□□ 1.25
TRIM46-207ENST00000468878 CFAP65Q6ZU64 1925 aaKnown RBP22.84■■□□□ 1.25
TRIM46-207ENST00000468878 GOLGA2Q08379 1002 aa22.84■■□□□ 1.25
TRIM46-207ENST00000468878 FANCIQ9NVI1 1328 aa22.83■■□□□ 1.25
TRIM46-207ENST00000468878 ADCY10Q96PN6 1610 aa22.83■■□□□ 1.25
TRIM46-207ENST00000468878 CROCC2H7BZ55 1655 aa22.82■■□□□ 1.24
TRIM46-207ENST00000468878 ABCC2Q92887 1545 aa22.82■■□□□ 1.24
TRIM46-207ENST00000468878 RTL5Q5HYW3 569 aaPredicted RBP22.82■■□□□ 1.24
TRIM46-207ENST00000468878 OSCARQ8IYS5 282 aa22.81■■□□□ 1.24
TRIM46-207ENST00000468878 DAXXQ9UER7 740 aaPredicted RBP22.81■■□□□ 1.24
TRIM46-207ENST00000468878 SRPK2P78362 688 aaKnown RBP22.81■■□□□ 1.24
TRIM46-207ENST00000468878 U2SURPO15042 1029 aaKnown RBP22.8■■□□□ 1.24
TRIM46-207ENST00000468878 SLC4A3P48751 1232 aa22.8■■□□□ 1.24
TRIM46-207ENST00000468878 PARD3Q8TEW0 1356 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms