RNA–Protein interactions for RNA: ENST00000468477.1

CDHR3-206, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-206ENST00000468477 DPYSL4O14531 572 aa6.54□□□□□ -1.36
CDHR3-206ENST00000468477 PHF14O94880 888 aa6.54□□□□□ -1.36
CDHR3-206ENST00000468477 EPAS1Q99814 870 aa6.54□□□□□ -1.36
CDHR3-206ENST00000468477 PODXL2Q9NZ53 605 aa6.54□□□□□ -1.36
CDHR3-206ENST00000468477 SPDYE16A6NNV3 312 aaPredicted RBP6.53□□□□□ -1.36
CDHR3-206ENST00000468477 TYW1BQ6NUM6 668 aa6.53□□□□□ -1.36
CDHR3-206ENST00000468477 KDM2AQ9Y2K7 1162 aa6.53□□□□□ -1.36
CDHR3-206ENST00000468477 GOLGA8CPA6NN73 597 aa6.52□□□□□ -1.37
CDHR3-206ENST00000468477 POTEEQ6S8J3 1075 aa6.52□□□□□ -1.37
CDHR3-206ENST00000468477 TMEM132AQ24JP5 1023 aa6.51□□□□□ -1.37
CDHR3-206ENST00000468477 DMRTA1Q5VZB9 504 aa6.51□□□□□ -1.37
CDHR3-206ENST00000468477 C14orf37Q86TY3 774 aa6.51□□□□□ -1.37
CDHR3-206ENST00000468477 SLC4A5Q9BY07 1137 aa6.5□□□□□ -1.37
CDHR3-206ENST00000468477 ADAM33Q9BZ11 813 aa6.5□□□□□ -1.37
CDHR3-206ENST00000468477 NBPF3Q9H094 633 aa6.5□□□□□ -1.37
CDHR3-206ENST00000468477 PCDHGA10Q9Y5H3 936 aa6.5□□□□□ -1.37
CDHR3-206ENST00000468477 PPP1R3GB7ZBB8 358 aa6.49□□□□□ -1.37
CDHR3-206ENST00000468477 HCSTQ9UBK5 93 aa6.49□□□□□ -1.37
CDHR3-206ENST00000468477 PDIA6Q15084 440 aa6.48□□□□□ -1.37
CDHR3-206ENST00000468477 MRPL50Q8N5N7 158 aaKnown RBP6.48□□□□□ -1.37
CDHR3-206ENST00000468477 VPS9D1Q9Y2B5 631 aa6.48□□□□□ -1.37
CDHR3-206ENST00000468477 NBR1Q14596 966 aa6.47□□□□□ -1.37
CDHR3-206ENST00000468477 DDX12PQ92771 950 aa6.47□□□□□ -1.37
CDHR3-206ENST00000468477 HRO43593 1189 aa6.46□□□□□ -1.38
CDHR3-206ENST00000468477 P3H3Q8IVL6 736 aa6.46□□□□□ -1.38
CDHR3-206ENST00000468477 ZBED2Q9BTP6 218 aa6.46□□□□□ -1.38
CDHR3-206ENST00000468477 ARIH1Q9Y4X5 557 aaPredicted RBP6.46□□□□□ -1.38
CDHR3-206ENST00000468477 MAP3K7O43318 606 aa6.45□□□□□ -1.38
CDHR3-206ENST00000468477 KCTD12Q96CX2 325 aaKnown RBP6.45□□□□□ -1.38
CDHR3-206ENST00000468477 RBM33Q96EV2 1170 aaKnown RBP6.45□□□□□ -1.38
CDHR3-206ENST00000468477 TSHZ2Q9NRE2 1034 aa6.45□□□□□ -1.38
CDHR3-206ENST00000468477 TTBK1Q5TCY1 1321 aaPredicted RBP6.45□□□□□ -1.38
CDHR3-206ENST00000468477 GRXCR2A6NFK2 248 aa6.44□□□□□ -1.38
CDHR3-206ENST00000468477 C6orf132Q5T0Z8 1188 aa6.44□□□□□ -1.38
CDHR3-206ENST00000468477 RABGEF1Q9UJ41 708 aa6.44□□□□□ -1.38
CDHR3-206ENST00000468477 CERKQ8TCT0 537 aa6.43□□□□□ -1.38
CDHR3-206ENST00000468477 ONECUT3O60422 494 aaPredicted RBP6.42□□□□□ -1.38
CDHR3-206ENST00000468477 EN1Q05925 392 aaPredicted RBP6.42□□□□□ -1.38
CDHR3-206ENST00000468477 ARHGEF1Q92888 912 aaKnown RBP6.42□□□□□ -1.38
CDHR3-206ENST00000468477 WNT2BQ93097 391 aa6.42□□□□□ -1.38
CDHR3-206ENST00000468477 LAPTM4BQ86VI4 370 aa6.41□□□□□ -1.38
CDHR3-206ENST00000468477 PACS2Q86VP3 889 aa6.41□□□□□ -1.38
CDHR3-206ENST00000468477 BHMG1C9JSJ3 638 aaPredicted RBP6.4□□□□□ -1.38
CDHR3-206ENST00000468477 COL9A1P20849 921 aa6.4□□□□□ -1.38
CDHR3-206ENST00000468477 PTPN5P54829 565 aa6.4□□□□□ -1.38
CDHR3-206ENST00000468477 ANKK1Q8NFD2 765 aa6.4□□□□□ -1.38
CDHR3-206ENST00000468477 TRIM6-TRIM34B2RNG4 842 aa6.39□□□□□ -1.39
CDHR3-206ENST00000468477 PROX2Q3B8N5 592 aa6.39□□□□□ -1.39
CDHR3-206ENST00000468477 NPM2Q86SE8 214 aaKnown RBP6.39□□□□□ -1.39
CDHR3-206ENST00000468477 KIAA1468Q9P260 1216 aa6.39□□□□□ -1.39
CDHR3-206ENST00000468477 MYT1Q01538 1121 aa6.38□□□□□ -1.39
CDHR3-206ENST00000468477 HDGFP51858 240 aaKnown RBP6.37□□□□□ -1.39
CDHR3-206ENST00000468477 PLA2G2EQ9NZK7 142 aa6.37□□□□□ -1.39
CDHR3-206ENST00000468477 FAM98CQ17RN3 349 aaKnown RBP6.36□□□□□ -1.39
CDHR3-206ENST00000468477 TSR1Q2NL82 804 aaKnown RBP6.36□□□□□ -1.39
CDHR3-206ENST00000468477 THSD4Q6ZMP0 1018 aa6.36□□□□□ -1.39
CDHR3-206ENST00000468477 KCNV2Q8TDN2 545 aa6.36□□□□□ -1.39
CDHR3-206ENST00000468477 NBPF26B4DH59 902 aa6.35□□□□□ -1.39
CDHR3-206ENST00000468477 SUPT5HO00267 1087 aaKnown RBP6.35□□□□□ -1.39
CDHR3-206ENST00000468477 PRSS12P56730 875 aa6.35□□□□□ -1.39
CDHR3-206ENST00000468477 CDCA7LQ96GN5 454 aa6.35□□□□□ -1.39
CDHR3-206ENST00000468477 OSBPP22059 807 aa6.34□□□□□ -1.39
CDHR3-206ENST00000468477 SLC4A3P48751 1232 aa6.34□□□□□ -1.39
CDHR3-206ENST00000468477 SMYD5Q6GMV2 418 aa6.34□□□□□ -1.39
CDHR3-206ENST00000468477 NYAP1Q6ZVC0 841 aa6.34□□□□□ -1.39
CDHR3-206ENST00000468477 ZFRQ96KR1 1074 aaKnown RBP6.34□□□□□ -1.39
CDHR3-206ENST00000468477 LRCH3Q96II8 777 aa6.33□□□□□ -1.4
CDHR3-206ENST00000468477 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.33□□□□□ -1.4
CDHR3-206ENST00000468477 RBM27Q9P2N5 1060 aaKnown RBP6.33□□□□□ -1.4
CDHR3-206ENST00000468477 SEPT9Q9UHD8 586 aaPredicted RBP6.33□□□□□ -1.4
CDHR3-206ENST00000468477 SOWAHBA6NEL2 793 aa6.32□□□□□ -1.4
CDHR3-206ENST00000468477 NECTIN2Q92692 538 aa6.31□□□□□ -1.4
CDHR3-206ENST00000468477 PNMA3Q9UL41 463 aa6.31□□□□□ -1.4
CDHR3-206ENST00000468477 TSKSQ9UJT2 592 aa6.3□□□□□ -1.4
CDHR3-206ENST00000468477 NUTM2FA1L443 756 aa6.29□□□□□ -1.4
CDHR3-206ENST00000468477 BCAMP50895 628 aa6.29□□□□□ -1.4
CDHR3-206ENST00000468477 PPP4CP60510 307 aa6.29□□□□□ -1.4
CDHR3-206ENST00000468477 TATDN2Q93075 761 aa6.29□□□□□ -1.4
CDHR3-206ENST00000468477 TSR3Q9UJK0 312 aaKnown RBP6.29□□□□□ -1.4
CDHR3-206ENST00000468477 MLLT3P42568 568 aaPredicted RBP6.28□□□□□ -1.4
CDHR3-206ENST00000468477 TRIM26Q12899 539 aaPredicted RBP6.28□□□□□ -1.4
CDHR3-206ENST00000468477 CDHR5Q9HBB8 845 aa6.28□□□□□ -1.4
CDHR3-206ENST00000468477 RNF40O75150 1001 aa6.27□□□□□ -1.41
CDHR3-206ENST00000468477 NUDT18Q6ZVK8 323 aa6.27□□□□□ -1.41
CDHR3-206ENST00000468477 HPS5Q9UPZ3 1129 aa6.27□□□□□ -1.41
CDHR3-206ENST00000468477 SMAPO00193 183 aa6.26□□□□□ -1.41
CDHR3-206ENST00000468477 SEMA3EO15041 775 aa6.26□□□□□ -1.41
CDHR3-206ENST00000468477 FCHSD2O94868 740 aa6.26□□□□□ -1.41
CDHR3-206ENST00000468477 PADI6Q6TGC4 694 aa6.26□□□□□ -1.41
CDHR3-206ENST00000468477 PRIM1P49642 420 aaKnown RBP6.25□□□□□ -1.41
CDHR3-206ENST00000468477 IFFO2Q5TF58 517 aa6.25□□□□□ -1.41
CDHR3-206ENST00000468477 SAMD7Q7Z3H4 446 aa6.25□□□□□ -1.41
CDHR3-206ENST00000468477 SLF2Q8IX21 1173 aa6.25□□□□□ -1.41
CDHR3-206ENST00000468477 WBP1LQ9NX94 342 aa6.25□□□□□ -1.41
CDHR3-206ENST00000468477 RBM46Q8TBY0 533 aaKnown RBP6.24□□□□□ -1.41
CDHR3-206ENST00000468477 UBTFP17480 764 aaKnown RBP6.23□□□□□ -1.41
CDHR3-206ENST00000468477 PTGDRQ13258 359 aa6.23□□□□□ -1.41
CDHR3-206ENST00000468477 PRR14Q9BWN1 585 aa6.23□□□□□ -1.41
CDHR3-206ENST00000468477 NPDC1Q9NQX5 325 aaPredicted RBP6.23□□□□□ -1.41
CDHR3-206ENST00000468477 KCNC4Q03721 635 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms