RNA–Protein interactions for RNA: ENST00000468086.1

RBM39-226, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-226ENST00000468086 ZDHHC16Q969W1 377 aa11.81□□□□□ -0.52
RBM39-226ENST00000468086 KDM2AQ9Y2K7 1162 aa11.81□□□□□ -0.52
RBM39-226ENST00000468086 PDIA6Q15084 440 aa11.79□□□□□ -0.52
RBM39-226ENST00000468086 ADAM33Q9BZ11 813 aa11.78□□□□□ -0.52
RBM39-226ENST00000468086 KCNV2Q8TDN2 545 aa11.77□□□□□ -0.53
RBM39-226ENST00000468086 ZBED2Q9BTP6 218 aa11.77□□□□□ -0.53
RBM39-226ENST00000468086 PCDHGA10Q9Y5H3 936 aa11.75□□□□□ -0.53
RBM39-226ENST00000468086 BHMG1C9JSJ3 638 aaPredicted RBP11.73□□□□□ -0.53
RBM39-226ENST00000468086 GOLGA8CPA6NN73 597 aa11.72□□□□□ -0.53
RBM39-226ENST00000468086 PHF14O94880 888 aa11.72□□□□□ -0.53
RBM39-226ENST00000468086 PTPN5P54829 565 aa11.72□□□□□ -0.53
RBM39-226ENST00000468086 MRPL50Q8N5N7 158 aaKnown RBP11.72□□□□□ -0.53
RBM39-226ENST00000468086 FBXW7Q969H0 707 aa11.7□□□□□ -0.54
RBM39-226ENST00000468086 NBPF3Q9H094 633 aa11.7□□□□□ -0.54
RBM39-226ENST00000468086 PPP1R3GB7ZBB8 358 aa11.69□□□□□ -0.54
RBM39-226ENST00000468086 TYW1BQ6NUM6 668 aa11.69□□□□□ -0.54
RBM39-226ENST00000468086 EPAS1Q99814 870 aa11.69□□□□□ -0.54
RBM39-226ENST00000468086 THSD4Q6ZMP0 1018 aa11.68□□□□□ -0.54
RBM39-226ENST00000468086 WNT2BQ93097 391 aa11.67□□□□□ -0.54
RBM39-226ENST00000468086 COL9A1P20849 921 aa11.64□□□□□ -0.55
RBM39-226ENST00000468086 PROX2Q3B8N5 592 aa11.63□□□□□ -0.55
RBM39-226ENST00000468086 DDX12PQ92771 950 aa11.63□□□□□ -0.55
RBM39-226ENST00000468086 RABGEF1Q9UJ41 708 aa11.63□□□□□ -0.55
RBM39-226ENST00000468086 GRXCR2A6NFK2 248 aa11.58□□□□□ -0.56
RBM39-226ENST00000468086 SLC24A1O60721 1099 aa11.58□□□□□ -0.56
RBM39-226ENST00000468086 NBR1Q14596 966 aa11.58□□□□□ -0.56
RBM39-226ENST00000468086 C6orf132Q5T0Z8 1188 aa11.58□□□□□ -0.56
RBM39-226ENST00000468086 ANKK1Q8NFD2 765 aa11.58□□□□□ -0.56
RBM39-226ENST00000468086 RBM33Q96EV2 1170 aaKnown RBP11.58□□□□□ -0.56
RBM39-226ENST00000468086 EN1Q05925 392 aaPredicted RBP11.57□□□□□ -0.56
RBM39-226ENST00000468086 OSBPP22059 807 aa11.56□□□□□ -0.56
RBM39-226ENST00000468086 LAPTM4BQ86VI4 370 aa11.55□□□□□ -0.56
RBM39-226ENST00000468086 KIAA1468Q9P260 1216 aa11.55□□□□□ -0.56
RBM39-226ENST00000468086 SEMA3EO15041 775 aa11.54□□□□□ -0.56
RBM39-226ENST00000468086 ONECUT3O60422 494 aaPredicted RBP11.54□□□□□ -0.56
RBM39-226ENST00000468086 IFFO2Q5TF58 517 aa11.54□□□□□ -0.56
RBM39-226ENST00000468086 SMYD5Q6GMV2 418 aa11.54□□□□□ -0.56
RBM39-226ENST00000468086 MLLT3P42568 568 aaPredicted RBP11.53□□□□□ -0.56
RBM39-226ENST00000468086 TESPA1A2RU30 521 aaPredicted RBP11.52□□□□□ -0.57
RBM39-226ENST00000468086 MAP3K7O43318 606 aa11.52□□□□□ -0.57
RBM39-226ENST00000468086 TSR1Q2NL82 804 aaKnown RBP11.51□□□□□ -0.57
RBM39-226ENST00000468086 TRIM6-TRIM34B2RNG4 842 aa11.5□□□□□ -0.57
RBM39-226ENST00000468086 CERKQ8TCT0 537 aa11.5□□□□□ -0.57
RBM39-226ENST00000468086 ZFRQ96KR1 1074 aaKnown RBP11.5□□□□□ -0.57
RBM39-226ENST00000468086 SOWAHBA6NEL2 793 aa11.49□□□□□ -0.57
RBM39-226ENST00000468086 BCAMP50895 628 aa11.49□□□□□ -0.57
RBM39-226ENST00000468086 SEPT9Q9UHD8 586 aaPredicted RBP11.49□□□□□ -0.57
RBM39-226ENST00000468086 PRIM1P49642 420 aaKnown RBP11.47□□□□□ -0.57
RBM39-226ENST00000468086 A0A0G2JS52 829 aa11.46□□□□□ -0.57
RBM39-226ENST00000468086 RGS20O76081 388 aa11.45□□□□□ -0.58
RBM39-226ENST00000468086 FAM98CQ17RN3 349 aaKnown RBP11.45□□□□□ -0.58
RBM39-226ENST00000468086 TULP1O00294 542 aaPredicted RBP11.44□□□□□ -0.58
RBM39-226ENST00000468086 NYAP1Q6ZVC0 841 aa11.44□□□□□ -0.58
RBM39-226ENST00000468086 TSKSQ9UJT2 592 aa11.43□□□□□ -0.58
RBM39-226ENST00000468086 ITGBL1O95965 494 aaPredicted RBP11.42□□□□□ -0.58
RBM39-226ENST00000468086 PACS2Q86VP3 889 aa11.42□□□□□ -0.58
RBM39-226ENST00000468086 LRCH3Q96II8 777 aa11.41□□□□□ -0.58
RBM39-226ENST00000468086 WBP1LQ9NX94 342 aa11.41□□□□□ -0.58
RBM39-226ENST00000468086 CDHR5Q9HBB8 845 aa11.4□□□□□ -0.58
RBM39-226ENST00000468086 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.4□□□□□ -0.58
RBM39-226ENST00000468086 RBM27Q9P2N5 1060 aaKnown RBP11.4□□□□□ -0.58
RBM39-226ENST00000468086 PRSS12P56730 875 aa11.38□□□□□ -0.59
RBM39-226ENST00000468086 CDCA7LQ96GN5 454 aa11.38□□□□□ -0.59
RBM39-226ENST00000468086 NPDC1Q9NQX5 325 aaPredicted RBP11.38□□□□□ -0.59
RBM39-226ENST00000468086 TSR3Q9UJK0 312 aaKnown RBP11.38□□□□□ -0.59
RBM39-226ENST00000468086 FAM198AQ9UFP1 575 aa11.37□□□□□ -0.59
RBM39-226ENST00000468086 HPS5Q9UPZ3 1129 aa11.37□□□□□ -0.59
RBM39-226ENST00000468086 NUTM2FA1L443 756 aa11.35□□□□□ -0.59
RBM39-226ENST00000468086 PTGDRQ13258 359 aa11.35□□□□□ -0.59
RBM39-226ENST00000468086 C3orf80F5H4A9 247 aa11.34□□□□□ -0.59
RBM39-226ENST00000468086 SMAPO00193 183 aa11.34□□□□□ -0.59
RBM39-226ENST00000468086 FCHSD2O94868 740 aa11.34□□□□□ -0.59
RBM39-226ENST00000468086 KCNC4Q03721 635 aa11.34□□□□□ -0.59
RBM39-226ENST00000468086 RBM26Q5T8P6 1007 aaKnown RBP11.34□□□□□ -0.59
RBM39-226ENST00000468086 TTC13Q8NBP0 860 aa11.32□□□□□ -0.6
RBM39-226ENST00000468086 IRX2Q9BZI1 471 aaPredicted RBP11.32□□□□□ -0.6
RBM39-226ENST00000468086 NBPF26B4DH59 902 aa11.31□□□□□ -0.6
RBM39-226ENST00000468086 PPP4CP60510 307 aa11.3□□□□□ -0.6
RBM39-226ENST00000468086 HIC1Q14526 733 aa11.29□□□□□ -0.6
RBM39-226ENST00000468086 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.29□□□□□ -0.6
RBM39-226ENST00000468086 SAMD7Q7Z3H4 446 aa11.29□□□□□ -0.6
RBM39-226ENST00000468086 PNMA3Q9UL41 463 aa11.29□□□□□ -0.6
RBM39-226ENST00000468086 TATDN2Q93075 761 aa11.28□□□□□ -0.6
RBM39-226ENST00000468086 PADI6Q6TGC4 694 aa11.27□□□□□ -0.61
RBM39-226ENST00000468086 GPIHBP1Q8IV16 184 aa11.27□□□□□ -0.61
RBM39-226ENST00000468086 GNPATO15228 680 aa11.24□□□□□ -0.61
RBM39-226ENST00000468086 NUDT18Q6ZVK8 323 aa11.24□□□□□ -0.61
RBM39-226ENST00000468086 BCANQ96GW7 911 aa11.24□□□□□ -0.61
RBM39-226ENST00000468086 GPR37O15354 613 aa11.23□□□□□ -0.61
RBM39-226ENST00000468086 HDGFP51858 240 aaKnown RBP11.22□□□□□ -0.61
RBM39-226ENST00000468086 LMOD2Q6P5Q4 547 aa11.22□□□□□ -0.61
RBM39-226ENST00000468086 RNF40O75150 1001 aa11.2□□□□□ -0.62
RBM39-226ENST00000468086 TJAP1Q5JTD0 557 aa11.19□□□□□ -0.62
RBM39-226ENST00000468086 EYA1Q99502 592 aa11.19□□□□□ -0.62
RBM39-226ENST00000468086 OATP04181 439 aa11.18□□□□□ -0.62
RBM39-226ENST00000468086 RBM46Q8TBY0 533 aaKnown RBP11.18□□□□□ -0.62
RBM39-226ENST00000468086 ADGRG1Q9Y653 693 aa11.18□□□□□ -0.62
RBM39-226ENST00000468086 MTRQ99707 1265 aa11.16□□□□□ -0.62
RBM39-226ENST00000468086 IL21Q9HBE4 155 aa11.16□□□□□ -0.62
RBM39-226ENST00000468086 NECTIN2Q92692 538 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms