RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 EIF5BO60841 1220 aaKnown RBP17.75■□□□□ 0.43
BRAT1-203ENST00000467558 CALD1Q05682 793 aaKnown RBP17.74■□□□□ 0.43
BRAT1-203ENST00000467558 C9orf84Q5VXU9 1444 aa17.73■□□□□ 0.43
BRAT1-203ENST00000467558 PLEKHH2Q8IVE3 1493 aa17.73■□□□□ 0.43
BRAT1-203ENST00000467558 MAP3K1Q13233 1512 aa17.73■□□□□ 0.43
BRAT1-203ENST00000467558 GOLGA2Q08379 1002 aa17.73■□□□□ 0.43
BRAT1-203ENST00000467558 RTF1Q92541 710 aaKnown RBP17.72■□□□□ 0.43
BRAT1-203ENST00000467558 EVC2Q86UK5 1308 aa17.72■□□□□ 0.43
BRAT1-203ENST00000467558 SUPT6HQ7KZ85 1726 aaKnown RBP17.71■□□□□ 0.43
BRAT1-203ENST00000467558 CCDC7Q96M83 1385 aa17.71■□□□□ 0.43
BRAT1-203ENST00000467558 MAGI1Q96QZ7 1491 aaPredicted RBP17.7■□□□□ 0.42
BRAT1-203ENST00000467558 IPO8O15397 1037 aaKnown RBP17.7■□□□□ 0.42
BRAT1-203ENST00000467558 KIF7Q2M1P5 1343 aa17.7■□□□□ 0.42
BRAT1-203ENST00000467558 GRIN2AQ12879 1464 aa17.69■□□□□ 0.42
BRAT1-203ENST00000467558 PCF11O94913 1555 aaKnown RBP17.69■□□□□ 0.42
BRAT1-203ENST00000467558 PAK3O75914 559 aaPredicted RBP17.69■□□□□ 0.42
BRAT1-203ENST00000467558 CASC1Q6TDU7 716 aa17.69■□□□□ 0.42
BRAT1-203ENST00000467558 CDK13Q14004 1512 aaKnown RBP17.69■□□□□ 0.42
BRAT1-203ENST00000467558 DAPK1P53355 1430 aa17.68■□□□□ 0.42
BRAT1-203ENST00000467558 KIAA1107Q9UPP5 1409 aa17.67■□□□□ 0.42
BRAT1-203ENST00000467558 CGNL1Q0VF96 1302 aa17.67■□□□□ 0.42
BRAT1-203ENST00000467558 NGDNQ8NEJ9 315 aaKnown RBP17.66■□□□□ 0.42
BRAT1-203ENST00000467558 NAIPQ13075 1403 aa17.65■□□□□ 0.42
BRAT1-203ENST00000467558 CCDC146Q8IYE0 955 aa17.65■□□□□ 0.42
BRAT1-203ENST00000467558 ARXQ96QS3 562 aa17.65■□□□□ 0.42
BRAT1-203ENST00000467558 ZBED9Q6R2W3 1325 aa17.64■□□□□ 0.41
BRAT1-203ENST00000467558 ROCK1Q13464 1354 aa17.64■□□□□ 0.41
BRAT1-203ENST00000467558 CENPJQ9HC77 1338 aaPredicted RBP17.63■□□□□ 0.41
BRAT1-203ENST00000467558 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.63■□□□□ 0.41
BRAT1-203ENST00000467558 WASHC2AQ641Q2 1341 aa17.62■□□□□ 0.41
BRAT1-203ENST00000467558 CNTLNQ9NXG0 1405 aa17.61■□□□□ 0.41
BRAT1-203ENST00000467558 ZNF608Q9ULD9 1512 aaPredicted RBP17.61■□□□□ 0.41
BRAT1-203ENST00000467558 MINK1Q8N4C8 1332 aaPredicted RBP17.61■□□□□ 0.41
BRAT1-203ENST00000467558 PLB1Q6P1J6 1458 aa17.6■□□□□ 0.41
BRAT1-203ENST00000467558 SCAPERQ9BY12 1400 aa17.6■□□□□ 0.41
BRAT1-203ENST00000467558 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.59■□□□□ 0.41
BRAT1-203ENST00000467558 NUTM2FA1L443 756 aa17.59■□□□□ 0.41
BRAT1-203ENST00000467558 LMOD3Q0VAK6 560 aa17.58■□□□□ 0.41
BRAT1-203ENST00000467558 CHMP4AQ9BY43 222 aa17.58■□□□□ 0.4
BRAT1-203ENST00000467558 ANP32EQ9BTT0 268 aa17.57■□□□□ 0.4
BRAT1-203ENST00000467558 NBPF8Q3BBV2 869 aa17.57■□□□□ 0.4
BRAT1-203ENST00000467558 RWDD1Q9H446 243 aaPredicted RBP17.57■□□□□ 0.4
BRAT1-203ENST00000467558 OS9Q13438 667 aaPredicted RBP17.56■□□□□ 0.4
BRAT1-203ENST00000467558 GOLGA6L22H0YM25 854 aa17.56■□□□□ 0.4
BRAT1-203ENST00000467558 SMC4Q9NTJ3 1288 aa17.56■□□□□ 0.4
BRAT1-203ENST00000467558 AMPHP49418 695 aa17.56■□□□□ 0.4
BRAT1-203ENST00000467558 NGEFQ8N5V2 710 aa17.56■□□□□ 0.4
BRAT1-203ENST00000467558 RBM19Q9Y4C8 960 aaKnown RBP17.55■□□□□ 0.4
BRAT1-203ENST00000467558 TCERG1O14776 1098 aaKnown RBP17.55■□□□□ 0.4
BRAT1-203ENST00000467558 COG3Q96JB2 828 aa17.55■□□□□ 0.4
BRAT1-203ENST00000467558 ARHGEF11O15085 1522 aa17.54■□□□□ 0.4
BRAT1-203ENST00000467558 CFAP70Q5T0N1 1121 aa17.54■□□□□ 0.4
BRAT1-203ENST00000467558 ITPRIPQ8IWB1 547 aa17.54■□□□□ 0.4
BRAT1-203ENST00000467558 NOP58Q9Y2X3 529 aaKnown RBP17.54■□□□□ 0.4
BRAT1-203ENST00000467558 CSB-PGBD3P0DP91 1061 aa17.52■□□□□ 0.4
BRAT1-203ENST00000467558 CCDC141Q6ZP82 1450 aa17.52■□□□□ 0.4
BRAT1-203ENST00000467558 E9PSI1 815 aa17.52■□□□□ 0.39
BRAT1-203ENST00000467558 NBPF1Q3BBV0 1214 aa17.52■□□□□ 0.39
BRAT1-203ENST00000467558 PMFBP1Q8TBY8 1022 aa17.52■□□□□ 0.39
BRAT1-203ENST00000467558 RRP7AQ9Y3A4 280 aaKnown RBP17.52■□□□□ 0.39
BRAT1-203ENST00000467558 ABCC5O15440 1437 aa17.51■□□□□ 0.39
BRAT1-203ENST00000467558 PTPN23Q9H3S7 1636 aa17.51■□□□□ 0.39
BRAT1-203ENST00000467558 APAF1O14727 1248 aa17.51■□□□□ 0.39
BRAT1-203ENST00000467558 TMEM132EQ6IEE7 984 aa17.51■□□□□ 0.39
BRAT1-203ENST00000467558 CFAP44Q96MT7 982 aa17.51■□□□□ 0.39
BRAT1-203ENST00000467558 STK31Q9BXU1 1019 aa17.51■□□□□ 0.39
BRAT1-203ENST00000467558 CAMSAP2Q08AD1 1489 aa17.5■□□□□ 0.39
BRAT1-203ENST00000467558 NCLP19338 710 aaKnown RBP17.5■□□□□ 0.39
BRAT1-203ENST00000467558 CLUAP1Q96AJ1 413 aa17.49■□□□□ 0.39
BRAT1-203ENST00000467558 SLC52A1Q9NWF4 448 aa17.48■□□□□ 0.39
BRAT1-203ENST00000467558 BRD4O60885 1362 aaPredicted RBP17.47■□□□□ 0.39
BRAT1-203ENST00000467558 RAPGEF3O95398 923 aa17.47■□□□□ 0.39
BRAT1-203ENST00000467558 AKNAQ7Z591 1439 aa17.46■□□□□ 0.39
BRAT1-203ENST00000467558 DIAPH1O60610 1272 aaKnown RBP17.46■□□□□ 0.38
BRAT1-203ENST00000467558 NCOA1Q15788 1441 aa17.45■□□□□ 0.38
BRAT1-203ENST00000467558 RRP1P56182 461 aaKnown RBP17.45■□□□□ 0.38
BRAT1-203ENST00000467558 KIF14Q15058 1648 aa17.45■□□□□ 0.38
BRAT1-203ENST00000467558 ANKRD30BQ9BXX2 1392 aa17.45■□□□□ 0.38
BRAT1-203ENST00000467558 LTV1Q96GA3 475 aaPredicted RBP17.44■□□□□ 0.38
BRAT1-203ENST00000467558 WDR97A6NE52 1622 aa17.44■□□□□ 0.38
BRAT1-203ENST00000467558 HSP90AB1P08238 724 aaKnown RBP17.43■□□□□ 0.38
BRAT1-203ENST00000467558 CABP2Q9NPB3 220 aa17.42■□□□□ 0.38
BRAT1-203ENST00000467558 KCNJ4P48050 445 aa17.41■□□□□ 0.38
BRAT1-203ENST00000467558 HSCBQ8IWL3 235 aa17.41■□□□□ 0.38
BRAT1-203ENST00000467558 RUNDC1Q96C34 613 aa17.41■□□□□ 0.38
BRAT1-203ENST00000467558 THOC2Q8NI27 1593 aaKnown RBP17.41■□□□□ 0.38
BRAT1-203ENST00000467558 TSHZ2Q9NRE2 1034 aa17.41■□□□□ 0.38
BRAT1-203ENST00000467558 APBB1O00213 710 aa17.4■□□□□ 0.38
BRAT1-203ENST00000467558 HDAC5Q9UQL6 1122 aa17.4■□□□□ 0.38
BRAT1-203ENST00000467558 RPGRIP1LQ68CZ1 1315 aa17.4■□□□□ 0.38
BRAT1-203ENST00000467558 HMMRO75330 724 aa17.39■□□□□ 0.37
BRAT1-203ENST00000467558 PLIN1O60240 522 aa17.39■□□□□ 0.37
BRAT1-203ENST00000467558 CD109Q6YHK3 1445 aa17.39■□□□□ 0.37
BRAT1-203ENST00000467558 GGNBP2Q9H3C7 697 aa17.38■□□□□ 0.37
BRAT1-203ENST00000467558 ZKSCAN2Q63HK3 967 aa17.38■□□□□ 0.37
BRAT1-203ENST00000467558 MCCP23508 829 aa17.38■□□□□ 0.37
BRAT1-203ENST00000467558 EXOC6Q8TAG9 804 aa17.37■□□□□ 0.37
BRAT1-203ENST00000467558 BCL2L13Q9BXK5 485 aa17.37■□□□□ 0.37
BRAT1-203ENST00000467558 NPHP1O15259 732 aa17.37■□□□□ 0.37
BRAT1-203ENST00000467558 CENPQQ7L2Z9 268 aaPredicted RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms