RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 SPAG9O60271 1321 aaKnown RBP15.85■□□□□ 0.13
HPS1-208ENST00000467246 RGL3Q3MIN7 710 aa15.84■□□□□ 0.13
HPS1-208ENST00000467246 CCDC184Q52MB2 194 aa15.84■□□□□ 0.13
HPS1-208ENST00000467246 KDM5CP41229 1560 aa15.84■□□□□ 0.13
HPS1-208ENST00000467246 BCORL1Q5H9F3 1711 aa15.84■□□□□ 0.13
HPS1-208ENST00000467246 POLR3GLQ9BT43 218 aa15.83■□□□□ 0.13
HPS1-208ENST00000467246 IQGAP3Q86VI3 1631 aa15.83■□□□□ 0.12
HPS1-208ENST00000467246 OSCARQ8IYS5 282 aa15.83■□□□□ 0.12
HPS1-208ENST00000467246 ARAP3Q8WWN8 1544 aa15.82■□□□□ 0.12
HPS1-208ENST00000467246 POLR1AO95602 1720 aaPredicted RBP15.82■□□□□ 0.12
HPS1-208ENST00000467246 MAGI2Q86UL8 1455 aa15.81■□□□□ 0.12
HPS1-208ENST00000467246 FANCAO15360 1455 aa15.81■□□□□ 0.12
HPS1-208ENST00000467246 ASXL2Q76L83 1435 aa15.8■□□□□ 0.12
HPS1-208ENST00000467246 ST20-MTHFSA0A0A6YYL1 179 aa15.79■□□□□ 0.12
HPS1-208ENST00000467246 RTEL1-TNFRSF6BF6WH68 1400 aa15.79■□□□□ 0.12
HPS1-208ENST00000467246 ZFYVE16Q7Z3T8 1539 aa15.78■□□□□ 0.12
HPS1-208ENST00000467246 HNRNPUQ00839 825 aaKnown RBP eCLIP15.78■□□□□ 0.12
HPS1-208ENST00000467246 ROCK2O75116 1388 aaKnown RBP15.78■□□□□ 0.12
HPS1-208ENST00000467246 ABCA9Q8IUA7 1624 aa15.78■□□□□ 0.12
HPS1-208ENST00000467246 PRAG1Q86YV5 1406 aa15.77■□□□□ 0.12
HPS1-208ENST00000467246 A2MP01023 1474 aa15.77■□□□□ 0.11
HPS1-208ENST00000467246 NBPF1Q3BBV0 1214 aa15.76■□□□□ 0.11
HPS1-208ENST00000467246 DHX29Q7Z478 1369 aaKnown RBP15.76■□□□□ 0.11
HPS1-208ENST00000467246 CNGB1Q14028 1251 aaPredicted RBP15.75■□□□□ 0.11
HPS1-208ENST00000467246 SCAPERQ9BY12 1400 aa15.75■□□□□ 0.11
HPS1-208ENST00000467246 ARID4BQ4LE39 1312 aaPredicted RBP15.75■□□□□ 0.11
HPS1-208ENST00000467246 ATP10AO60312 1499 aa15.75■□□□□ 0.11
HPS1-208ENST00000467246 MRS2Q9HD23 443 aa15.75■□□□□ 0.11
HPS1-208ENST00000467246 MYT1LQ9UL68 1186 aa15.75■□□□□ 0.11
HPS1-208ENST00000467246 ADGRL1O94910 1474 aa15.75■□□□□ 0.11
HPS1-208ENST00000467246 NPM1P06748 294 aaKnown RBP eCLIP15.74■□□□□ 0.11
HPS1-208ENST00000467246 FAM9BQ8IZU0 186 aa15.73■□□□□ 0.11
HPS1-208ENST00000467246 ATP7AQ04656 1500 aa15.73■□□□□ 0.11
HPS1-208ENST00000467246 TRPM1Q7Z4N2 1603 aa15.72■□□□□ 0.11
HPS1-208ENST00000467246 FKBP8Q14318 412 aa15.71■□□□□ 0.11
HPS1-208ENST00000467246 INO80Q9ULG1 1556 aaPredicted RBP15.71■□□□□ 0.11
HPS1-208ENST00000467246 KIF3BO15066 747 aa15.7■□□□□ 0.1
HPS1-208ENST00000467246 E9PCH4 1651 aa15.69■□□□□ 0.1
HPS1-208ENST00000467246 GPRASP1Q5JY77 1395 aa15.68■□□□□ 0.1
HPS1-208ENST00000467246 BCANQ96GW7 911 aa15.68■□□□□ 0.1
HPS1-208ENST00000467246 DEPDC5O75140 1603 aa15.67■□□□□ 0.1
HPS1-208ENST00000467246 KANK1Q14678 1352 aa15.65■□□□□ 0.1
HPS1-208ENST00000467246 PTPRTO14522 1441 aa15.65■□□□□ 0.1
HPS1-208ENST00000467246 CD109Q6YHK3 1445 aa15.64■□□□□ 0.09
HPS1-208ENST00000467246 TRPM2O94759 1503 aa15.64■□□□□ 0.09
HPS1-208ENST00000467246 NEFLP07196 543 aa15.64■□□□□ 0.09
HPS1-208ENST00000467246 VWDEQ8N2E2 1590 aa15.63■□□□□ 0.09
HPS1-208ENST00000467246 TESK2Q96S53 571 aa15.63■□□□□ 0.09
HPS1-208ENST00000467246 PRDM15P57071 1507 aaPredicted RBP15.62■□□□□ 0.09
HPS1-208ENST00000467246 KIDINS220Q9ULH0 1771 aa15.62■□□□□ 0.09
HPS1-208ENST00000467246 TET3O43151 1660 aa15.62■□□□□ 0.09
HPS1-208ENST00000467246 ZNF518AQ6AHZ1 1483 aa15.62■□□□□ 0.09
HPS1-208ENST00000467246 EIF2AK4Q9P2K8 1649 aaKnown RBP15.61■□□□□ 0.09
HPS1-208ENST00000467246 CLTCL1P53675 1640 aa15.61■□□□□ 0.09
HPS1-208ENST00000467246 MROH1Q8NDA8 1641 aa15.61■□□□□ 0.09
HPS1-208ENST00000467246 SPHKAPQ2M3C7 1700 aa15.61■□□□□ 0.09
HPS1-208ENST00000467246 LAMC1P11047 1609 aa15.6■□□□□ 0.09
HPS1-208ENST00000467246 DISP3Q9P2K9 1392 aa15.6■□□□□ 0.09
HPS1-208ENST00000467246 BCL11AQ9H165 835 aa15.59■□□□□ 0.09
HPS1-208ENST00000467246 TSHZ2Q9NRE2 1034 aa15.59■□□□□ 0.09
HPS1-208ENST00000467246 ZBED9Q6R2W3 1325 aa15.58■□□□□ 0.08
HPS1-208ENST00000467246 COL17A1Q9UMD9 1497 aaPredicted RBP15.57■□□□□ 0.08
HPS1-208ENST00000467246 POGZQ7Z3K3 1410 aa15.57■□□□□ 0.08
HPS1-208ENST00000467246 CEP152O94986 1710 aa15.57■□□□□ 0.08
HPS1-208ENST00000467246 MADDQ8WXG6 1647 aa15.57■□□□□ 0.08
HPS1-208ENST00000467246 TMC1Q8TDI8 760 aa15.56■□□□□ 0.08
HPS1-208ENST00000467246 UGGT1Q9NYU2 1555 aa15.56■□□□□ 0.08
HPS1-208ENST00000467246 PNISRQ8TF01 805 aaKnown RBP15.56■□□□□ 0.08
HPS1-208ENST00000467246 PER1O15534 1290 aaPredicted RBP15.55■□□□□ 0.08
HPS1-208ENST00000467246 RNF17Q9BXT8 1623 aaKnown RBP15.55■□□□□ 0.08
HPS1-208ENST00000467246 TMF1P82094 1093 aa15.55■□□□□ 0.08
HPS1-208ENST00000467246 RAPGEF3O95398 923 aa15.54■□□□□ 0.08
HPS1-208ENST00000467246 RALBP1Q15311 655 aa15.54■□□□□ 0.08
HPS1-208ENST00000467246 GGT6Q6P531 493 aa15.53■□□□□ 0.08
HPS1-208ENST00000467246 STAC3Q96MF2 364 aa15.53■□□□□ 0.08
HPS1-208ENST00000467246 MLH3Q9UHC1 1453 aa15.53■□□□□ 0.08
HPS1-208ENST00000467246 CFAP74Q9C0B2 1584 aa15.53■□□□□ 0.08
HPS1-208ENST00000467246 MYBBP1AQ9BQG0 1328 aaKnown RBP15.53■□□□□ 0.08
HPS1-208ENST00000467246 EFCAB6Q5THR3 1501 aa15.53■□□□□ 0.08
HPS1-208ENST00000467246 IRX6P78412 446 aaPredicted RBP15.53■□□□□ 0.08
HPS1-208ENST00000467246 SENP3-EIF4A1A0A087X0R7 540 aa15.53■□□□□ 0.08
HPS1-208ENST00000467246 ANP32EQ9BTT0 268 aa15.52■□□□□ 0.08
HPS1-208ENST00000467246 PANK3Q9H999 370 aa15.52■□□□□ 0.08
HPS1-208ENST00000467246 FRMPD1Q5SYB0 1578 aa15.52■□□□□ 0.07
HPS1-208ENST00000467246 KTN1Q86UP2 1357 aaKnown RBP15.52■□□□□ 0.07
HPS1-208ENST00000467246 CYB5RLQ6IPT4 315 aa15.52■□□□□ 0.07
HPS1-208ENST00000467246 PPRC1Q5VV67 1664 aaKnown RBP15.51■□□□□ 0.07
HPS1-208ENST00000467246 BRD4O60885 1362 aaPredicted RBP15.5■□□□□ 0.07
HPS1-208ENST00000467246 HECW2Q9P2P5 1572 aa15.5■□□□□ 0.07
HPS1-208ENST00000467246 LMTK2Q8IWU2 1503 aa15.5■□□□□ 0.07
HPS1-208ENST00000467246 ADGRF5Q8IZF2 1346 aa15.49■□□□□ 0.07
HPS1-208ENST00000467246 PARD3Q8TEW0 1356 aa15.49■□□□□ 0.07
HPS1-208ENST00000467246 CFAP70Q5T0N1 1121 aa15.49■□□□□ 0.07
HPS1-208ENST00000467246 SCAF11Q99590 1463 aaKnown RBP15.49■□□□□ 0.07
HPS1-208ENST00000467246 CC2D1BQ5T0F9 858 aaKnown RBP15.48■□□□□ 0.07
HPS1-208ENST00000467246 IQGAP1P46940 1657 aa15.48■□□□□ 0.07
HPS1-208ENST00000467246 NEO1Q92859 1461 aa15.48■□□□□ 0.07
HPS1-208ENST00000467246 NPATQ14207 1427 aa15.47■□□□□ 0.07
HPS1-208ENST00000467246 ABCA6Q8N139 1617 aa15.47■□□□□ 0.07
HPS1-208ENST00000467246 CHGAP10645 457 aaKnown RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms