RNA–Protein interactions for RNA: ENST00000466913.1

MUC1-215, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 177 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-215ENST00000466913 PPP1R3GB7ZBB8 358 aa6.39□□□□□ -1.39
MUC1-215ENST00000466913 HAP1P54257 671 aaPredicted RBP6.39□□□□□ -1.39
MUC1-215ENST00000466913 NBR1Q14596 966 aa6.39□□□□□ -1.39
MUC1-215ENST00000466913 DDX12PQ92771 950 aa6.39□□□□□ -1.39
MUC1-215ENST00000466913 SLC4A5Q9BY07 1137 aa6.38□□□□□ -1.39
MUC1-215ENST00000466913 ARHGEF1Q92888 912 aaKnown RBP6.37□□□□□ -1.39
MUC1-215ENST00000466913 MAP3K7O43318 606 aa6.36□□□□□ -1.39
MUC1-215ENST00000466913 EN1Q05925 392 aaPredicted RBP6.36□□□□□ -1.39
MUC1-215ENST00000466913 KCNV2Q8TDN2 545 aa6.36□□□□□ -1.39
MUC1-215ENST00000466913 RBM33Q96EV2 1170 aaKnown RBP6.36□□□□□ -1.39
MUC1-215ENST00000466913 NBPF3Q9H094 633 aa6.36□□□□□ -1.39
MUC1-215ENST00000466913 VPS9D1Q9Y2B5 631 aa6.36□□□□□ -1.39
MUC1-215ENST00000466913 GRXCR2A6NFK2 248 aa6.35□□□□□ -1.39
MUC1-215ENST00000466913 HRO43593 1189 aa6.35□□□□□ -1.39
MUC1-215ENST00000466913 ZBED2Q9BTP6 218 aa6.35□□□□□ -1.39
MUC1-215ENST00000466913 C6orf132Q5T0Z8 1188 aa6.34□□□□□ -1.39
MUC1-215ENST00000466913 GOLGA8CPA6NN73 597 aa6.33□□□□□ -1.4
MUC1-215ENST00000466913 MRPL50Q8N5N7 158 aaKnown RBP6.32□□□□□ -1.4
MUC1-215ENST00000466913 COL9A1P20849 921 aa6.31□□□□□ -1.4
MUC1-215ENST00000466913 PROX2Q3B8N5 592 aa6.31□□□□□ -1.4
MUC1-215ENST00000466913 CERKQ8TCT0 537 aa6.31□□□□□ -1.4
MUC1-215ENST00000466913 KCTD12Q96CX2 325 aaKnown RBP6.31□□□□□ -1.4
MUC1-215ENST00000466913 RABGEF1Q9UJ41 708 aa6.31□□□□□ -1.4
MUC1-215ENST00000466913 ONECUT3O60422 494 aaPredicted RBP6.3□□□□□ -1.4
MUC1-215ENST00000466913 HCSTQ9UBK5 93 aa6.3□□□□□ -1.4
MUC1-215ENST00000466913 TRIM6-TRIM34B2RNG4 842 aa6.29□□□□□ -1.4
MUC1-215ENST00000466913 TSR1Q2NL82 804 aaKnown RBP6.29□□□□□ -1.4
MUC1-215ENST00000466913 BHMG1C9JSJ3 638 aaPredicted RBP6.28□□□□□ -1.4
MUC1-215ENST00000466913 OSBPP22059 807 aa6.27□□□□□ -1.41
MUC1-215ENST00000466913 PRIM1P49642 420 aaKnown RBP6.27□□□□□ -1.41
MUC1-215ENST00000466913 LAPTM4BQ86VI4 370 aa6.27□□□□□ -1.41
MUC1-215ENST00000466913 VSIG10Q8N0Z9 540 aa6.27□□□□□ -1.41
MUC1-215ENST00000466913 ANKK1Q8NFD2 765 aa6.27□□□□□ -1.41
MUC1-215ENST00000466913 WNT2BQ93097 391 aa6.27□□□□□ -1.41
MUC1-215ENST00000466913 PACS2Q86VP3 889 aa6.26□□□□□ -1.41
MUC1-215ENST00000466913 KIAA1468Q9P260 1216 aa6.26□□□□□ -1.41
MUC1-215ENST00000466913 NBPF26B4DH59 902 aa6.25□□□□□ -1.41
MUC1-215ENST00000466913 MLLT3P42568 568 aaPredicted RBP6.25□□□□□ -1.41
MUC1-215ENST00000466913 CDCA7LQ96GN5 454 aa6.25□□□□□ -1.41
MUC1-215ENST00000466913 CDHR5Q9HBB8 845 aa6.25□□□□□ -1.41
MUC1-215ENST00000466913 RBM27Q9P2N5 1060 aaKnown RBP6.25□□□□□ -1.41
MUC1-215ENST00000466913 PRSS12P56730 875 aa6.24□□□□□ -1.41
MUC1-215ENST00000466913 FAM98CQ17RN3 349 aaKnown RBP6.24□□□□□ -1.41
MUC1-215ENST00000466913 SMYD5Q6GMV2 418 aa6.24□□□□□ -1.41
MUC1-215ENST00000466913 THSD4Q6ZMP0 1018 aa6.24□□□□□ -1.41
MUC1-215ENST00000466913 SEPT9Q9UHD8 586 aaPredicted RBP6.24□□□□□ -1.41
MUC1-215ENST00000466913 PTPN5P54829 565 aa6.23□□□□□ -1.41
MUC1-215ENST00000466913 TSKSQ9UJT2 592 aa6.23□□□□□ -1.41
MUC1-215ENST00000466913 SEMA3EO15041 775 aa6.22□□□□□ -1.41
MUC1-215ENST00000466913 ZFRQ96KR1 1074 aaKnown RBP6.22□□□□□ -1.41
MUC1-215ENST00000466913 NUTM2FA1L443 756 aa6.21□□□□□ -1.42
MUC1-215ENST00000466913 LRCH3Q96II8 777 aa6.21□□□□□ -1.42
MUC1-215ENST00000466913 KDM2AQ9Y2K7 1162 aa6.21□□□□□ -1.42
MUC1-215ENST00000466913 TESPA1A2RU30 521 aaPredicted RBP6.2□□□□□ -1.42
MUC1-215ENST00000466913 PADI6Q6TGC4 694 aa6.2□□□□□ -1.42
MUC1-215ENST00000466913 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.2□□□□□ -1.42
MUC1-215ENST00000466913 PNMA3Q9UL41 463 aa6.2□□□□□ -1.42
MUC1-215ENST00000466913 SOWAHBA6NEL2 793 aa6.19□□□□□ -1.42
MUC1-215ENST00000466913 TULP1O00294 542 aaPredicted RBP6.19□□□□□ -1.42
MUC1-215ENST00000466913 BCAMP50895 628 aa6.19□□□□□ -1.42
MUC1-215ENST00000466913 TATDN2Q93075 761 aa6.19□□□□□ -1.42
MUC1-215ENST00000466913 NYAP1Q6ZVC0 841 aa6.18□□□□□ -1.42
MUC1-215ENST00000466913 PLA2G2EQ9NZK7 142 aa6.18□□□□□ -1.42
MUC1-215ENST00000466913 CCDC180Q9P1Z9 1646 aa6.17□□□□□ -1.42
MUC1-215ENST00000466913 SMAPO00193 183 aa6.17□□□□□ -1.42
MUC1-215ENST00000466913 FCHSD2O94868 740 aa6.17□□□□□ -1.42
MUC1-215ENST00000466913 SLC4A3P48751 1232 aa6.17□□□□□ -1.42
MUC1-215ENST00000466913 HDGFP51858 240 aaKnown RBP6.17□□□□□ -1.42
MUC1-215ENST00000466913 PTGDRQ13258 359 aa6.17□□□□□ -1.42
MUC1-215ENST00000466913 NUDT18Q6ZVK8 323 aa6.17□□□□□ -1.42
MUC1-215ENST00000466913 NPDC1Q9NQX5 325 aaPredicted RBP6.17□□□□□ -1.42
MUC1-215ENST00000466913 FAM198AQ9UFP1 575 aa6.17□□□□□ -1.42
MUC1-215ENST00000466913 C3orf80F5H4A9 247 aa6.16□□□□□ -1.42
MUC1-215ENST00000466913 TTC13Q8NBP0 860 aa6.16□□□□□ -1.42
MUC1-215ENST00000466913 NECTIN2Q92692 538 aa6.16□□□□□ -1.42
MUC1-215ENST00000466913 HPS5Q9UPZ3 1129 aa6.16□□□□□ -1.42
MUC1-215ENST00000466913 RNF40O75150 1001 aa6.15□□□□□ -1.42
MUC1-215ENST00000466913 SAMD7Q7Z3H4 446 aa6.15□□□□□ -1.42
MUC1-215ENST00000466913 TSR3Q9UJK0 312 aaKnown RBP6.15□□□□□ -1.42
MUC1-215ENST00000466913 HIC1Q14526 733 aa6.14□□□□□ -1.43
MUC1-215ENST00000466913 RBM46Q8TBY0 533 aaKnown RBP6.14□□□□□ -1.43
MUC1-215ENST00000466913 PPP4CP60510 307 aa6.13□□□□□ -1.43
MUC1-215ENST00000466913 RBM26Q5T8P6 1007 aaKnown RBP6.13□□□□□ -1.43
MUC1-215ENST00000466913 GPIHBP1Q8IV16 184 aa6.13□□□□□ -1.43
MUC1-215ENST00000466913 WBP1LQ9NX94 342 aa6.13□□□□□ -1.43
MUC1-215ENST00000466913 SLF2Q8IX21 1173 aa6.12□□□□□ -1.43
MUC1-215ENST00000466913 ABCC9O60706 1549 aa6.11□□□□□ -1.43
MUC1-215ENST00000466913 GNPATO15228 680 aa6.11□□□□□ -1.43
MUC1-215ENST00000466913 DNAJB2P25686 324 aa6.11□□□□□ -1.43
MUC1-215ENST00000466913 ADGRG1Q9Y653 693 aa6.11□□□□□ -1.43
MUC1-215ENST00000466913 SWT1Q5T5J6 900 aaKnown RBP6.1□□□□□ -1.43
MUC1-215ENST00000466913 OATP04181 439 aa6.09□□□□□ -1.43
MUC1-215ENST00000466913 IFFO2Q5TF58 517 aa6.09□□□□□ -1.43
MUC1-215ENST00000466913 EYA1Q99502 592 aa6.09□□□□□ -1.43
MUC1-215ENST00000466913 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.08□□□□□ -1.44
MUC1-215ENST00000466913 ITGBL1O95965 494 aaPredicted RBP6.08□□□□□ -1.44
MUC1-215ENST00000466913 FAM161AQ3B820 660 aa6.08□□□□□ -1.44
MUC1-215ENST00000466913 PRR14Q9BWN1 585 aa6.08□□□□□ -1.44
MUC1-215ENST00000466913 RCCD1A6NED2 376 aa6.07□□□□□ -1.44
MUC1-215ENST00000466913 GPR37O15354 613 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms