RNA–Protein interactions for RNA: ENST00000466708.5

CCDC78-207, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-207ENST00000466708 PLA2R1Q13018 1463 aa28.75■■■□□ 2.19
CCDC78-207ENST00000466708 EIF2AK4Q9P2K8 1649 aaKnown RBP28.73■■■□□ 2.19
CCDC78-207ENST00000466708 WASHC2AQ641Q2 1341 aa28.73■■■□□ 2.19
CCDC78-207ENST00000466708 DHX29Q7Z478 1369 aaKnown RBP28.72■■■□□ 2.19
CCDC78-207ENST00000466708 RALGAPBQ86X10 1494 aa28.72■■■□□ 2.19
CCDC78-207ENST00000466708 ANP32CO43423 234 aa28.71■■■□□ 2.19
CCDC78-207ENST00000466708 KIDINS220Q9ULH0 1771 aa28.68■■■□□ 2.18
CCDC78-207ENST00000466708 MYT1LQ9UL68 1186 aa28.68■■■□□ 2.18
CCDC78-207ENST00000466708 POLR1AO95602 1720 aaPredicted RBP28.67■■■□□ 2.18
CCDC78-207ENST00000466708 KANK1Q14678 1352 aa28.67■■■□□ 2.18
CCDC78-207ENST00000466708 ZNF326Q5BKZ1 582 aaKnown RBP28.66■■■□□ 2.18
CCDC78-207ENST00000466708 DCAF11Q8TEB1 546 aa28.66■■■□□ 2.18
CCDC78-207ENST00000466708 NEO1Q92859 1461 aa28.66■■■□□ 2.18
CCDC78-207ENST00000466708 CCER2I3L3R5 266 aa28.66■■■□□ 2.18
CCDC78-207ENST00000466708 KDM5CP41229 1560 aa28.66■■■□□ 2.18
CCDC78-207ENST00000466708 POGZQ7Z3K3 1410 aa28.65■■■□□ 2.18
CCDC78-207ENST00000466708 SCAF1Q9H7N4 1312 aaKnown RBP28.65■■■□□ 2.18
CCDC78-207ENST00000466708 VWDEQ8N2E2 1590 aa28.65■■■□□ 2.18
CCDC78-207ENST00000466708 CCDC7Q96M83 1385 aa28.65■■■□□ 2.18
CCDC78-207ENST00000466708 TET3O43151 1660 aa28.64■■■□□ 2.17
CCDC78-207ENST00000466708 E9PCH4 1651 aa28.63■■■□□ 2.17
CCDC78-207ENST00000466708 RIMBP3CA6NJZ7 1639 aa28.63■■■□□ 2.17
CCDC78-207ENST00000466708 RIMBP3BA6NNM3 1639 aa28.63■■■□□ 2.17
CCDC78-207ENST00000466708 RIMBP3Q9UFD9 1639 aa28.63■■■□□ 2.17
CCDC78-207ENST00000466708 USP47Q96K76 1375 aa28.63■■■□□ 2.17
CCDC78-207ENST00000466708 MLH3Q9UHC1 1453 aa28.62■■■□□ 2.17
CCDC78-207ENST00000466708 PRDM15P57071 1507 aaPredicted RBP28.62■■■□□ 2.17
CCDC78-207ENST00000466708 KIF3BO15066 747 aa28.6■■■□□ 2.17
CCDC78-207ENST00000466708 CYB5RLQ6IPT4 315 aa28.6■■■□□ 2.17
CCDC78-207ENST00000466708 KDM2AQ9Y2K7 1162 aa28.6■■■□□ 2.17
CCDC78-207ENST00000466708 C11orf95C9JLR9 678 aaPredicted RBP28.58■■■□□ 2.17
CCDC78-207ENST00000466708 CNTLNQ9NXG0 1405 aa28.58■■■□□ 2.17
CCDC78-207ENST00000466708 PTPRTO14522 1441 aa28.57■■■□□ 2.16
CCDC78-207ENST00000466708 TRPM2O94759 1503 aa28.57■■■□□ 2.16
CCDC78-207ENST00000466708 PRAG1Q86YV5 1406 aa28.57■■■□□ 2.16
CCDC78-207ENST00000466708 GLI2P10070 1586 aa28.57■■■□□ 2.16
CCDC78-207ENST00000466708 HECW2Q9P2P5 1572 aa28.57■■■□□ 2.16
CCDC78-207ENST00000466708 A2MP01023 1474 aa28.56■■■□□ 2.16
CCDC78-207ENST00000466708 CARD11Q9BXL7 1154 aa28.56■■■□□ 2.16
CCDC78-207ENST00000466708 MROH1Q8NDA8 1641 aa28.56■■■□□ 2.16
CCDC78-207ENST00000466708 MAP3K4Q9Y6R4 1608 aa28.56■■■□□ 2.16
CCDC78-207ENST00000466708 ARID4BQ4LE39 1312 aaPredicted RBP28.55■■■□□ 2.16
CCDC78-207ENST00000466708 SPHKAPQ2M3C7 1700 aa28.55■■■□□ 2.16
CCDC78-207ENST00000466708 RGL3Q3MIN7 710 aa28.53■■■□□ 2.16
CCDC78-207ENST00000466708 KIF7Q2M1P5 1343 aa28.53■■■□□ 2.16
CCDC78-207ENST00000466708 TRPM1Q7Z4N2 1603 aa28.53■■■□□ 2.16
CCDC78-207ENST00000466708 RNF17Q9BXT8 1623 aaKnown RBP28.51■■■□□ 2.15
CCDC78-207ENST00000466708 ROCK2O75116 1388 aaKnown RBP28.5■■■□□ 2.15
CCDC78-207ENST00000466708 LMTK2Q8IWU2 1503 aa28.49■■■□□ 2.15
CCDC78-207ENST00000466708 CEP152O94986 1710 aa28.48■■■□□ 2.15
CCDC78-207ENST00000466708 BCORL1Q5H9F3 1711 aa28.47■■■□□ 2.15
CCDC78-207ENST00000466708 STAC3Q96MF2 364 aa28.47■■■□□ 2.15
CCDC78-207ENST00000466708 GPRASP1Q5JY77 1395 aa28.47■■■□□ 2.15
CCDC78-207ENST00000466708 LAMC1P11047 1609 aa28.46■■■□□ 2.15
CCDC78-207ENST00000466708 GTF3C3Q9Y5Q9 886 aa28.45■■■□□ 2.14
CCDC78-207ENST00000466708 EFCAB6Q5THR3 1501 aa28.45■■■□□ 2.14
CCDC78-207ENST00000466708 FRMPD1Q5SYB0 1578 aa28.44■■■□□ 2.14
CCDC78-207ENST00000466708 NEURL4Q96JN8 1562 aa28.44■■■□□ 2.14
CCDC78-207ENST00000466708 CLTCL1P53675 1640 aa28.43■■■□□ 2.14
CCDC78-207ENST00000466708 ABCA6Q8N139 1617 aa28.43■■■□□ 2.14
CCDC78-207ENST00000466708 RICTORQ6R327 1708 aa28.41■■■□□ 2.14
CCDC78-207ENST00000466708 RAPGEF3O95398 923 aa28.39■■■□□ 2.13
CCDC78-207ENST00000466708 DIP2BQ9P265 1576 aa28.38■■■□□ 2.13
CCDC78-207ENST00000466708 ST20-MTHFSA0A0A6YYL1 179 aa28.37■■■□□ 2.13
CCDC78-207ENST00000466708 PPRC1Q5VV67 1664 aaKnown RBP28.37■■■□□ 2.13
CCDC78-207ENST00000466708 DIP2CQ9Y2E4 1556 aa28.35■■■□□ 2.13
CCDC78-207ENST00000466708 FAM69CQ0P6D2 419 aa28.33■■■□□ 2.13
CCDC78-207ENST00000466708 NBPF1Q3BBV0 1214 aa28.33■■■□□ 2.13
CCDC78-207ENST00000466708 PRKRIP1Q9H875 184 aaPredicted RBP28.32■■■□□ 2.12
CCDC78-207ENST00000466708 MADDQ8WXG6 1647 aa28.31■■■□□ 2.12
CCDC78-207ENST00000466708 KIF1BO60333 1816 aa28.29■■■□□ 2.12
CCDC78-207ENST00000466708 GGT6Q6P531 493 aa28.28■■■□□ 2.12
CCDC78-207ENST00000466708 ZMYM4Q5VZL5 1548 aa28.26■■■□□ 2.12
CCDC78-207ENST00000466708 ABCC3O15438 1527 aa28.26■■■□□ 2.11
CCDC78-207ENST00000466708 NPATQ14207 1427 aa28.24■■■□□ 2.11
CCDC78-207ENST00000466708 WASHC2CQ9Y4E1 1318 aa28.24■■■□□ 2.11
CCDC78-207ENST00000466708 POLR3GLQ9BT43 218 aa28.23■■■□□ 2.11
CCDC78-207ENST00000466708 KIAA1210Q9ULL0 1709 aa28.21■■■□□ 2.11
CCDC78-207ENST00000466708 MYOM2P54296 1465 aa28.21■■■□□ 2.11
CCDC78-207ENST00000466708 UGGT1Q9NYU2 1555 aa28.21■■■□□ 2.11
CCDC78-207ENST00000466708 YEATS2Q9ULM3 1422 aa28.2■■■□□ 2.1
CCDC78-207ENST00000466708 CAMSAP1Q5T5Y3 1602 aa28.2■■■□□ 2.1
CCDC78-207ENST00000466708 ZC3H13Q5T200 1668 aaKnown RBP28.2■■■□□ 2.1
CCDC78-207ENST00000466708 COL17A1Q9UMD9 1497 aaPredicted RBP28.17■■■□□ 2.1
CCDC78-207ENST00000466708 IFT172Q9UG01 1749 aa28.16■■■□□ 2.1
CCDC78-207ENST00000466708 TSPOAP1O95153 1857 aa28.16■■■□□ 2.1
CCDC78-207ENST00000466708 TESK2Q96S53 571 aa28.16■■■□□ 2.1
CCDC78-207ENST00000466708 ADGRB3O60242 1522 aa28.16■■■□□ 2.1
CCDC78-207ENST00000466708 IQGAP1P46940 1657 aa28.16■■■□□ 2.1
CCDC78-207ENST00000466708 ARHGAP31Q2M1Z3 1444 aa28.15■■■□□ 2.1
CCDC78-207ENST00000466708 MROH2AA6NES4 1674 aa28.13■■■□□ 2.09
CCDC78-207ENST00000466708 NOS1P29475 1434 aa28.13■■■□□ 2.09
CCDC78-207ENST00000466708 SCAF11Q99590 1463 aaKnown RBP28.12■■■□□ 2.09
CCDC78-207ENST00000466708 TMF1P82094 1093 aa28.11■■■□□ 2.09
CCDC78-207ENST00000466708 REREQ9P2R6 1566 aa28.1■■■□□ 2.09
CCDC78-207ENST00000466708 NRXN1Q9ULB1 1477 aa28.1■■■□□ 2.09
CCDC78-207ENST00000466708 CFAP65Q6ZU64 1925 aaKnown RBP28.1■■■□□ 2.09
CCDC78-207ENST00000466708 KTN1Q86UP2 1357 aaKnown RBP28.09■■■□□ 2.09
CCDC78-207ENST00000466708 MRS2Q9HD23 443 aa28.08■■■□□ 2.09
CCDC78-207ENST00000466708 RPGRIP1LQ68CZ1 1315 aa28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms