RNA–Protein interactions for RNA: ENST00000466696.1

CHMP2B-202, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2

Gene CHMP2B, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-202ENST00000466696 PDIA6Q15084 440 aa11.45□□□□□ -0.58
CHMP2B-202ENST00000466696 BHMG1C9JSJ3 638 aaPredicted RBP11.44□□□□□ -0.58
CHMP2B-202ENST00000466696 DDX12PQ92771 950 aa11.43□□□□□ -0.58
CHMP2B-202ENST00000466696 KCTD12Q96CX2 325 aaKnown RBP11.43□□□□□ -0.58
CHMP2B-202ENST00000466696 ARIH1Q9Y4X5 557 aaPredicted RBP11.43□□□□□ -0.58
CHMP2B-202ENST00000466696 NBPF3Q9H094 633 aa11.41□□□□□ -0.58
CHMP2B-202ENST00000466696 COL9A1P20849 921 aa11.4□□□□□ -0.58
CHMP2B-202ENST00000466696 C6orf132Q5T0Z8 1188 aa11.4□□□□□ -0.58
CHMP2B-202ENST00000466696 MRPL50Q8N5N7 158 aaKnown RBP11.4□□□□□ -0.58
CHMP2B-202ENST00000466696 GOLGA8CPA6NN73 597 aa11.39□□□□□ -0.59
CHMP2B-202ENST00000466696 NBR1Q14596 966 aa11.37□□□□□ -0.59
CHMP2B-202ENST00000466696 RBM33Q96EV2 1170 aaKnown RBP11.37□□□□□ -0.59
CHMP2B-202ENST00000466696 RABGEF1Q9UJ41 708 aa11.37□□□□□ -0.59
CHMP2B-202ENST00000466696 PROX2Q3B8N5 592 aa11.36□□□□□ -0.59
CHMP2B-202ENST00000466696 TSHZ2Q9NRE2 1034 aa11.36□□□□□ -0.59
CHMP2B-202ENST00000466696 ONECUT3O60422 494 aaPredicted RBP11.34□□□□□ -0.59
CHMP2B-202ENST00000466696 EN1Q05925 392 aaPredicted RBP11.34□□□□□ -0.59
CHMP2B-202ENST00000466696 MAP3K7O43318 606 aa11.33□□□□□ -0.6
CHMP2B-202ENST00000466696 WNT2BQ93097 391 aa11.33□□□□□ -0.6
CHMP2B-202ENST00000466696 PTPN5P54829 565 aa11.31□□□□□ -0.6
CHMP2B-202ENST00000466696 THSD4Q6ZMP0 1018 aa11.31□□□□□ -0.6
CHMP2B-202ENST00000466696 PLA2G2EQ9NZK7 142 aa11.31□□□□□ -0.6
CHMP2B-202ENST00000466696 GRXCR2A6NFK2 248 aa11.3□□□□□ -0.6
CHMP2B-202ENST00000466696 LAPTM4BQ86VI4 370 aa11.3□□□□□ -0.6
CHMP2B-202ENST00000466696 KIAA1468Q9P260 1216 aa11.3□□□□□ -0.6
CHMP2B-202ENST00000466696 TRIM6-TRIM34B2RNG4 842 aa11.29□□□□□ -0.6
CHMP2B-202ENST00000466696 TSR1Q2NL82 804 aaKnown RBP11.28□□□□□ -0.6
CHMP2B-202ENST00000466696 ANKK1Q8NFD2 765 aa11.26□□□□□ -0.61
CHMP2B-202ENST00000466696 ARHGEF1Q92888 912 aaKnown RBP11.26□□□□□ -0.61
CHMP2B-202ENST00000466696 CERKQ8TCT0 537 aa11.25□□□□□ -0.61
CHMP2B-202ENST00000466696 PACS2Q86VP3 889 aa11.24□□□□□ -0.61
CHMP2B-202ENST00000466696 OSBPP22059 807 aa11.23□□□□□ -0.61
CHMP2B-202ENST00000466696 PRIM1P49642 420 aaKnown RBP11.22□□□□□ -0.61
CHMP2B-202ENST00000466696 ZFRQ96KR1 1074 aaKnown RBP11.22□□□□□ -0.61
CHMP2B-202ENST00000466696 SEPT9Q9UHD8 586 aaPredicted RBP11.22□□□□□ -0.61
CHMP2B-202ENST00000466696 FAM98CQ17RN3 349 aaKnown RBP11.21□□□□□ -0.61
CHMP2B-202ENST00000466696 KCNV2Q8TDN2 545 aa11.21□□□□□ -0.61
CHMP2B-202ENST00000466696 TSKSQ9UJT2 592 aa11.21□□□□□ -0.61
CHMP2B-202ENST00000466696 PLCB2Q00722 1185 aa11.2□□□□□ -0.62
CHMP2B-202ENST00000466696 CDCA7LQ96GN5 454 aa11.2□□□□□ -0.62
CHMP2B-202ENST00000466696 SOWAHBA6NEL2 793 aa11.19□□□□□ -0.62
CHMP2B-202ENST00000466696 PRSS12P56730 875 aa11.19□□□□□ -0.62
CHMP2B-202ENST00000466696 P3H3Q8IVL6 736 aa11.19□□□□□ -0.62
CHMP2B-202ENST00000466696 BCAMP50895 628 aa11.17□□□□□ -0.62
CHMP2B-202ENST00000466696 NYAP1Q6ZVC0 841 aa11.15□□□□□ -0.62
CHMP2B-202ENST00000466696 CDHR5Q9HBB8 845 aa11.15□□□□□ -0.62
CHMP2B-202ENST00000466696 RBM27Q9P2N5 1060 aaKnown RBP11.15□□□□□ -0.62
CHMP2B-202ENST00000466696 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.14□□□□□ -0.63
CHMP2B-202ENST00000466696 NBPF26B4DH59 902 aa11.13□□□□□ -0.63
CHMP2B-202ENST00000466696 IFFO2Q5TF58 517 aa11.13□□□□□ -0.63
CHMP2B-202ENST00000466696 LRCH3Q96II8 777 aa11.13□□□□□ -0.63
CHMP2B-202ENST00000466696 MLLT3P42568 568 aaPredicted RBP11.12□□□□□ -0.63
CHMP2B-202ENST00000466696 FAM198AQ9UFP1 575 aa11.12□□□□□ -0.63
CHMP2B-202ENST00000466696 TATDN2Q93075 761 aa11.11□□□□□ -0.63
CHMP2B-202ENST00000466696 WBP1LQ9NX94 342 aa11.1□□□□□ -0.63
CHMP2B-202ENST00000466696 TSR3Q9UJK0 312 aaKnown RBP11.1□□□□□ -0.63
CHMP2B-202ENST00000466696 SMAPO00193 183 aa11.09□□□□□ -0.63
CHMP2B-202ENST00000466696 NPDC1Q9NQX5 325 aaPredicted RBP11.09□□□□□ -0.63
CHMP2B-202ENST00000466696 PNMA3Q9UL41 463 aa11.09□□□□□ -0.63
CHMP2B-202ENST00000466696 HPS5Q9UPZ3 1129 aa11.08□□□□□ -0.64
CHMP2B-202ENST00000466696 NUDT18Q6ZVK8 323 aa11.06□□□□□ -0.64
CHMP2B-202ENST00000466696 TTC13Q8NBP0 860 aa11.06□□□□□ -0.64
CHMP2B-202ENST00000466696 C3orf80F5H4A9 247 aa11.05□□□□□ -0.64
CHMP2B-202ENST00000466696 ITGBL1O95965 494 aaPredicted RBP11.05□□□□□ -0.64
CHMP2B-202ENST00000466696 HDGFP51858 240 aaKnown RBP11.05□□□□□ -0.64
CHMP2B-202ENST00000466696 PADI6Q6TGC4 694 aa11.05□□□□□ -0.64
CHMP2B-202ENST00000466696 SAMD7Q7Z3H4 446 aa11.05□□□□□ -0.64
CHMP2B-202ENST00000466696 PPP4CP60510 307 aa11.04□□□□□ -0.64
CHMP2B-202ENST00000466696 HAP1P54257 671 aaPredicted RBP11.03□□□□□ -0.64
CHMP2B-202ENST00000466696 SEMA3EO15041 775 aa11.02□□□□□ -0.65
CHMP2B-202ENST00000466696 A0A0G2JS52 829 aa11.01□□□□□ -0.65
CHMP2B-202ENST00000466696 RGS20O76081 388 aa11□□□□□ -0.65
CHMP2B-202ENST00000466696 PTGDRQ13258 359 aa11□□□□□ -0.65
CHMP2B-202ENST00000466696 NUTM2FA1L443 756 aa10.99□□□□□ -0.65
CHMP2B-202ENST00000466696 KCNC4Q03721 635 aa10.98□□□□□ -0.65
CHMP2B-202ENST00000466696 NECTIN2Q92692 538 aa10.96□□□□□ -0.65
CHMP2B-202ENST00000466696 EYA1Q99502 592 aa10.96□□□□□ -0.65
CHMP2B-202ENST00000466696 RNF40O75150 1001 aa10.95□□□□□ -0.66
CHMP2B-202ENST00000466696 SMYD5Q6GMV2 418 aa10.95□□□□□ -0.66
CHMP2B-202ENST00000466696 TESPA1A2RU30 521 aaPredicted RBP10.94□□□□□ -0.66
CHMP2B-202ENST00000466696 FCHSD2O94868 740 aa10.94□□□□□ -0.66
CHMP2B-202ENST00000466696 SLC4A3P48751 1232 aa10.94□□□□□ -0.66
CHMP2B-202ENST00000466696 SLF2Q8IX21 1173 aa10.94□□□□□ -0.66
CHMP2B-202ENST00000466696 SWT1Q5T5J6 900 aaKnown RBP10.93□□□□□ -0.66
CHMP2B-202ENST00000466696 RBM46Q8TBY0 533 aaKnown RBP10.92□□□□□ -0.66
CHMP2B-202ENST00000466696 ADGRG1Q9Y653 693 aa10.9□□□□□ -0.66
CHMP2B-202ENST00000466696 DNAJB2P25686 324 aa10.89□□□□□ -0.67
CHMP2B-202ENST00000466696 TJAP1Q5JTD0 557 aa10.89□□□□□ -0.67
CHMP2B-202ENST00000466696 KDM2AQ9Y2K7 1162 aa10.89□□□□□ -0.67
CHMP2B-202ENST00000466696 APLP1P51693 650 aa10.87□□□□□ -0.67
CHMP2B-202ENST00000466696 HIC1Q14526 733 aa10.87□□□□□ -0.67
CHMP2B-202ENST00000466696 RBM26Q5T8P6 1007 aaKnown RBP10.87□□□□□ -0.67
CHMP2B-202ENST00000466696 MTRQ99707 1265 aa10.87□□□□□ -0.67
CHMP2B-202ENST00000466696 IL21Q9HBE4 155 aa10.87□□□□□ -0.67
CHMP2B-202ENST00000466696 VSIG10Q8N0Z9 540 aa10.86□□□□□ -0.67
CHMP2B-202ENST00000466696 PRR14Q9BWN1 585 aa10.85□□□□□ -0.67
CHMP2B-202ENST00000466696 TMEM134Q9H6X4 195 aa10.85□□□□□ -0.67
CHMP2B-202ENST00000466696 OATP04181 439 aa10.84□□□□□ -0.67
CHMP2B-202ENST00000466696 FAM161AQ3B820 660 aa10.84□□□□□ -0.67
CHMP2B-202ENST00000466696 RCCD1A6NED2 376 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms