RNA–Protein interactions for RNA: ENST00000466391.1

LSG1-206, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 791 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-206ENST00000466391 VARS2Q5ST30 1063 aaKnown RBP14.15□□□□□ -0.14
LSG1-206ENST00000466391 ADAM33Q9BZ11 813 aa14.15□□□□□ -0.14
LSG1-206ENST00000466391 FAM205CA6NFA0 338 aa14.14□□□□□ -0.15
LSG1-206ENST00000466391 TSR1Q2NL82 804 aaKnown RBP14.13□□□□□ -0.15
LSG1-206ENST00000466391 SUPT5HO00267 1087 aaKnown RBP14.12□□□□□ -0.15
LSG1-206ENST00000466391 ZC3H15Q8WU90 426 aaKnown RBP14.12□□□□□ -0.15
LSG1-206ENST00000466391 CDHR5Q9HBB8 845 aa14.11□□□□□ -0.15
LSG1-206ENST00000466391 ABCC9O60706 1549 aa14.1□□□□□ -0.15
LSG1-206ENST00000466391 C6orf132Q5T0Z8 1188 aa14.09□□□□□ -0.15
LSG1-206ENST00000466391 BCL2L12Q9HB09 334 aa14.07□□□□□ -0.16
LSG1-206ENST00000466391 HS3ST6Q96QI5 342 aa14.06□□□□□ -0.16
LSG1-206ENST00000466391 GPR37O15354 613 aa14.05□□□□□ -0.16
LSG1-206ENST00000466391 FCHSD2O94868 740 aa14.05□□□□□ -0.16
LSG1-206ENST00000466391 POTEB3A0JP26 581 aa14.04□□□□□ -0.16
LSG1-206ENST00000466391 PTPREP23469 700 aa14.04□□□□□ -0.16
LSG1-206ENST00000466391 PTGDRQ13258 359 aa14.04□□□□□ -0.16
LSG1-206ENST00000466391 POTEBQ6S5H4 581 aa14.04□□□□□ -0.16
LSG1-206ENST00000466391 SCRIBQ14160 1630 aa14.03□□□□□ -0.16
LSG1-206ENST00000466391 KCNK17Q96T54 332 aa14.02□□□□□ -0.17
LSG1-206ENST00000466391 NPDC1Q9NQX5 325 aaPredicted RBP14.02□□□□□ -0.17
LSG1-206ENST00000466391 ZMYND10O75800 440 aa14.01□□□□□ -0.17
LSG1-206ENST00000466391 COL9A1P20849 921 aa13.99□□□□□ -0.17
LSG1-206ENST00000466391 HIC1Q14526 733 aa13.99□□□□□ -0.17
LSG1-206ENST00000466391 ZNF687Q8N1G0 1237 aa13.99□□□□□ -0.17
LSG1-206ENST00000466391 KCNH8Q96L42 1107 aa13.99□□□□□ -0.17
LSG1-206ENST00000466391 GNPATO15228 680 aa13.98□□□□□ -0.17
LSG1-206ENST00000466391 CERKQ8TCT0 537 aa13.98□□□□□ -0.17
LSG1-206ENST00000466391 AXIN2Q9Y2T1 843 aa13.98□□□□□ -0.17
LSG1-206ENST00000466391 PSEN2P49810 448 aa13.97□□□□□ -0.17
LSG1-206ENST00000466391 POTEEQ6S8J3 1075 aa13.97□□□□□ -0.17
LSG1-206ENST00000466391 BARGINQ6ZT62 677 aa13.97□□□□□ -0.17
LSG1-206ENST00000466391 PPP1R3GB7ZBB8 358 aa13.96□□□□□ -0.17
LSG1-206ENST00000466391 FECHP22830 423 aa13.96□□□□□ -0.17
LSG1-206ENST00000466391 ARHGAP33O14559 1287 aa13.95□□□□□ -0.18
LSG1-206ENST00000466391 KRI1Q8N9T8 703 aaKnown RBP13.95□□□□□ -0.18
LSG1-206ENST00000466391 RB1CC1Q8TDY2 1594 aa13.95□□□□□ -0.18
LSG1-206ENST00000466391 PBX2P40425 430 aa13.92□□□□□ -0.18
LSG1-206ENST00000466391 SLC24A3Q9HC58 644 aa13.92□□□□□ -0.18
LSG1-206ENST00000466391 PRSS12P56730 875 aa13.91□□□□□ -0.18
LSG1-206ENST00000466391 PADI6Q6TGC4 694 aa13.91□□□□□ -0.18
LSG1-206ENST00000466391 CDCA7LQ96GN5 454 aa13.91□□□□□ -0.18
LSG1-206ENST00000466391 DMRTA1Q5VZB9 504 aa13.9□□□□□ -0.18
LSG1-206ENST00000466391 MAP2K5Q13163 448 aa13.88□□□□□ -0.19
LSG1-206ENST00000466391 PROX2Q3B8N5 592 aa13.88□□□□□ -0.19
LSG1-206ENST00000466391 POTEGQ6S5H5 508 aa13.88□□□□□ -0.19
LSG1-206ENST00000466391 MINK1Q8N4C8 1332 aaPredicted RBP13.87□□□□□ -0.19
LSG1-206ENST00000466391 POTEMA6NI47 508 aa13.86□□□□□ -0.19
LSG1-206ENST00000466391 ZBED2Q9BTP6 218 aa13.86□□□□□ -0.19
LSG1-206ENST00000466391 RBM27Q9P2N5 1060 aaKnown RBP13.86□□□□□ -0.19
LSG1-206ENST00000466391 RSF1Q96T23 1441 aaPredicted RBP13.86□□□□□ -0.19
LSG1-206ENST00000466391 TSKSQ9UJT2 592 aa13.85□□□□□ -0.19
LSG1-206ENST00000466391 TRIM6-TRIM34B2RNG4 842 aa13.84□□□□□ -0.19
LSG1-206ENST00000466391 IRF6O14896 467 aa13.84□□□□□ -0.19
LSG1-206ENST00000466391 TTC13Q8NBP0 860 aa13.84□□□□□ -0.19
LSG1-206ENST00000466391 FAM198AQ9UFP1 575 aa13.84□□□□□ -0.19
LSG1-206ENST00000466391 FAM161AQ3B820 660 aa13.83□□□□□ -0.2
LSG1-206ENST00000466391 CCDC102AQ96A19 550 aa13.82□□□□□ -0.2
LSG1-206ENST00000466391 AK7Q96M32 723 aa13.82□□□□□ -0.2
LSG1-206ENST00000466391 LSM11P83369 360 aaKnown RBP eCLIP13.8□□□□□ -0.2
LSG1-206ENST00000466391 PACS2Q86VP3 889 aa13.8□□□□□ -0.2
LSG1-206ENST00000466391 SLC4A5Q9BY07 1137 aa13.79□□□□□ -0.2
LSG1-206ENST00000466391 KIAA1468Q9P260 1216 aa13.79□□□□□ -0.2
LSG1-206ENST00000466391 VPS9D1Q9Y2B5 631 aa13.79□□□□□ -0.2
LSG1-206ENST00000466391 ADGRG1Q9Y653 693 aa13.79□□□□□ -0.2
LSG1-206ENST00000466391 ANKRD13DQ6ZTN6 518 aa13.78□□□□□ -0.2
LSG1-206ENST00000466391 ONECUT3O60422 494 aaPredicted RBP13.77□□□□□ -0.21
LSG1-206ENST00000466391 CDAN1Q8IWY9 1227 aa13.77□□□□□ -0.21
LSG1-206ENST00000466391 NUDT18Q6ZVK8 323 aa13.76□□□□□ -0.21
LSG1-206ENST00000466391 PNMA3Q9UL41 463 aa13.76□□□□□ -0.21
LSG1-206ENST00000466391 NBPF26B4DH59 902 aa13.75□□□□□ -0.21
LSG1-206ENST00000466391 C3orf80F5H4A9 247 aa13.75□□□□□ -0.21
LSG1-206ENST00000466391 TRIM66O15016 1216 aa13.75□□□□□ -0.21
LSG1-206ENST00000466391 TATDN2Q93075 761 aa13.75□□□□□ -0.21
LSG1-206ENST00000466391 KRTAP3-3Q9BYR6 98 aa13.75□□□□□ -0.21
LSG1-206ENST00000466391 KRTAP3-2Q9BYR7 98 aa13.75□□□□□ -0.21
LSG1-206ENST00000466391 RABGEF1Q9UJ41 708 aa13.75□□□□□ -0.21
LSG1-206ENST00000466391 TK2O00142 265 aa13.74□□□□□ -0.21
LSG1-206ENST00000466391 SMAPO00193 183 aa13.74□□□□□ -0.21
LSG1-206ENST00000466391 OATP04181 439 aa13.74□□□□□ -0.21
LSG1-206ENST00000466391 ADGRD1Q6QNK2 874 aa13.74□□□□□ -0.21
LSG1-206ENST00000466391 RBM46Q8TBY0 533 aaKnown RBP13.73□□□□□ -0.21
LSG1-206ENST00000466391 METTL3Q86U44 580 aaKnown RBP13.72□□□□□ -0.21
LSG1-206ENST00000466391 PXYLP1Q8TE99 480 aa13.71□□□□□ -0.21
LSG1-206ENST00000466391 PHOX2BQ99453 314 aa13.7□□□□□ -0.22
LSG1-206ENST00000466391 EYA1Q99502 592 aa13.7□□□□□ -0.22
LSG1-206ENST00000466391 SEPT9Q9UHD8 586 aaPredicted RBP13.7□□□□□ -0.22
LSG1-206ENST00000466391 UNC13AQ9UPW8 1703 aa13.68□□□□□ -0.22
LSG1-206ENST00000466391 NLRP7Q8WX94 980 aa13.68□□□□□ -0.22
LSG1-206ENST00000466391 NBPF3Q9H094 633 aa13.68□□□□□ -0.22
LSG1-206ENST00000466391 CECR2Q9BXF3 1484 aa13.67□□□□□ -0.22
LSG1-206ENST00000466391 PDE4DQ08499 809 aa13.67□□□□□ -0.22
LSG1-206ENST00000466391 MROH2BQ7Z745 1585 aa13.66□□□□□ -0.22
LSG1-206ENST00000466391 BAZ1AQ9NRL2 1556 aaPredicted RBP13.66□□□□□ -0.22
LSG1-206ENST00000466391 BHMG1C9JSJ3 638 aaPredicted RBP13.66□□□□□ -0.22
LSG1-206ENST00000466391 RCCD1A6NED2 376 aa13.65□□□□□ -0.22
LSG1-206ENST00000466391 AMHR2Q16671 573 aa13.65□□□□□ -0.22
LSG1-206ENST00000466391 STAC3Q96MF2 364 aa13.65□□□□□ -0.22
LSG1-206ENST00000466391 HRO43593 1189 aa13.64□□□□□ -0.23
LSG1-206ENST00000466391 MRPL50Q8N5N7 158 aaKnown RBP13.64□□□□□ -0.23
LSG1-206ENST00000466391 MDM2Q00987 491 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms