RNA–Protein interactions for RNA: ENST00000465630.1

UBR3-207, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-207ENST00000465630 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.82□□□□□ -0.84
UBR3-207ENST00000465630 THSD4Q6ZMP0 1018 aa9.81□□□□□ -0.84
UBR3-207ENST00000465630 DDX12PQ92771 950 aa9.8□□□□□ -0.84
UBR3-207ENST00000465630 PAXIP1Q6ZW49 1069 aaPredicted RBP9.79□□□□□ -0.84
UBR3-207ENST00000465630 WNT2BQ93097 391 aa9.79□□□□□ -0.84
UBR3-207ENST00000465630 NBPF3Q9H094 633 aa9.79□□□□□ -0.84
UBR3-207ENST00000465630 C6orf132Q5T0Z8 1188 aa9.78□□□□□ -0.84
UBR3-207ENST00000465630 CFAP44Q96MT7 982 aa9.78□□□□□ -0.84
UBR3-207ENST00000465630 EPAS1Q99814 870 aa9.78□□□□□ -0.84
UBR3-207ENST00000465630 GOLGA8CPA6NN73 597 aa9.77□□□□□ -0.85
UBR3-207ENST00000465630 PDIA6Q15084 440 aa9.77□□□□□ -0.85
UBR3-207ENST00000465630 RBM33Q96EV2 1170 aaKnown RBP9.77□□□□□ -0.85
UBR3-207ENST00000465630 RABGEF1Q9UJ41 708 aa9.77□□□□□ -0.85
UBR3-207ENST00000465630 KIAA1468Q9P260 1216 aa9.74□□□□□ -0.85
UBR3-207ENST00000465630 NBR1Q14596 966 aa9.73□□□□□ -0.85
UBR3-207ENST00000465630 E2F4Q16254 413 aa9.72□□□□□ -0.85
UBR3-207ENST00000465630 EN1Q05925 392 aaPredicted RBP9.71□□□□□ -0.86
UBR3-207ENST00000465630 TSR1Q2NL82 804 aaKnown RBP9.71□□□□□ -0.86
UBR3-207ENST00000465630 SEPT9Q9UHD8 586 aaPredicted RBP9.71□□□□□ -0.86
UBR3-207ENST00000465630 SPDYE16A6NNV3 312 aaPredicted RBP9.7□□□□□ -0.86
UBR3-207ENST00000465630 PRIM1P49642 420 aaKnown RBP9.7□□□□□ -0.86
UBR3-207ENST00000465630 TRIM6-TRIM34B2RNG4 842 aa9.69□□□□□ -0.86
UBR3-207ENST00000465630 BCAMP50895 628 aa9.69□□□□□ -0.86
UBR3-207ENST00000465630 ANKK1Q8NFD2 765 aa9.69□□□□□ -0.86
UBR3-207ENST00000465630 MAP3K7O43318 606 aa9.68□□□□□ -0.86
UBR3-207ENST00000465630 ONECUT3O60422 494 aaPredicted RBP9.68□□□□□ -0.86
UBR3-207ENST00000465630 LAPTM4BQ86VI4 370 aa9.68□□□□□ -0.86
UBR3-207ENST00000465630 ARIH1Q9Y4X5 557 aaPredicted RBP9.68□□□□□ -0.86
UBR3-207ENST00000465630 ZFRQ96KR1 1074 aaKnown RBP9.67□□□□□ -0.86
UBR3-207ENST00000465630 WDR70Q9NW82 654 aa9.66□□□□□ -0.86
UBR3-207ENST00000465630 TSKSQ9UJT2 592 aa9.66□□□□□ -0.86
UBR3-207ENST00000465630 SOWAHBA6NEL2 793 aa9.65□□□□□ -0.86
UBR3-207ENST00000465630 IFFO2Q5TF58 517 aa9.64□□□□□ -0.87
UBR3-207ENST00000465630 GRXCR2A6NFK2 248 aa9.63□□□□□ -0.87
UBR3-207ENST00000465630 FAM98CQ17RN3 349 aaKnown RBP9.63□□□□□ -0.87
UBR3-207ENST00000465630 WBP1LQ9NX94 342 aa9.62□□□□□ -0.87
UBR3-207ENST00000465630 FAM198AQ9UFP1 575 aa9.62□□□□□ -0.87
UBR3-207ENST00000465630 OSBPP22059 807 aa9.61□□□□□ -0.87
UBR3-207ENST00000465630 C3orf80F5H4A9 247 aa9.6□□□□□ -0.87
UBR3-207ENST00000465630 CDCA7LQ96GN5 454 aa9.6□□□□□ -0.87
UBR3-207ENST00000465630 CDHR5Q9HBB8 845 aa9.6□□□□□ -0.87
UBR3-207ENST00000465630 TSHZ2Q9NRE2 1034 aa9.6□□□□□ -0.87
UBR3-207ENST00000465630 A0A0G2JS52 829 aa9.59□□□□□ -0.87
UBR3-207ENST00000465630 SMAPO00193 183 aa9.58□□□□□ -0.88
UBR3-207ENST00000465630 PRSS12P56730 875 aa9.58□□□□□ -0.88
UBR3-207ENST00000465630 PACS2Q86VP3 889 aa9.58□□□□□ -0.88
UBR3-207ENST00000465630 ITGBL1O95965 494 aaPredicted RBP9.57□□□□□ -0.88
UBR3-207ENST00000465630 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.57□□□□□ -0.88
UBR3-207ENST00000465630 LRCH3Q96II8 777 aa9.56□□□□□ -0.88
UBR3-207ENST00000465630 HPS5Q9UPZ3 1129 aa9.56□□□□□ -0.88
UBR3-207ENST00000465630 NYAP1Q6ZVC0 841 aa9.54□□□□□ -0.88
UBR3-207ENST00000465630 CERKQ8TCT0 537 aa9.54□□□□□ -0.88
UBR3-207ENST00000465630 TSR3Q9UJK0 312 aaKnown RBP9.54□□□□□ -0.88
UBR3-207ENST00000465630 SAMD7Q7Z3H4 446 aa9.52□□□□□ -0.89
UBR3-207ENST00000465630 KCNV2Q8TDN2 545 aa9.52□□□□□ -0.89
UBR3-207ENST00000465630 TATDN2Q93075 761 aa9.52□□□□□ -0.89
UBR3-207ENST00000465630 NPDC1Q9NQX5 325 aaPredicted RBP9.51□□□□□ -0.89
UBR3-207ENST00000465630 PNMA3Q9UL41 463 aa9.51□□□□□ -0.89
UBR3-207ENST00000465630 NBPF26B4DH59 902 aa9.5□□□□□ -0.89
UBR3-207ENST00000465630 RGS20O76081 388 aa9.5□□□□□ -0.89
UBR3-207ENST00000465630 MLLT3P42568 568 aaPredicted RBP9.5□□□□□ -0.89
UBR3-207ENST00000465630 TTC13Q8NBP0 860 aa9.49□□□□□ -0.89
UBR3-207ENST00000465630 KCNC4Q03721 635 aa9.48□□□□□ -0.89
UBR3-207ENST00000465630 NUDT18Q6ZVK8 323 aa9.48□□□□□ -0.89
UBR3-207ENST00000465630 RBM27Q9P2N5 1060 aaKnown RBP9.48□□□□□ -0.89
UBR3-207ENST00000465630 PADI6Q6TGC4 694 aa9.47□□□□□ -0.89
UBR3-207ENST00000465630 ARHGEF1Q92888 912 aaKnown RBP9.47□□□□□ -0.89
UBR3-207ENST00000465630 PPP4CP60510 307 aa9.46□□□□□ -0.9
UBR3-207ENST00000465630 TJAP1Q5JTD0 557 aa9.43□□□□□ -0.9
UBR3-207ENST00000465630 RNF40O75150 1001 aa9.41□□□□□ -0.9
UBR3-207ENST00000465630 APLP1P51693 650 aa9.4□□□□□ -0.9
UBR3-207ENST00000465630 SWT1Q5T5J6 900 aaKnown RBP9.4□□□□□ -0.9
UBR3-207ENST00000465630 IRX2Q9BZI1 471 aaPredicted RBP9.4□□□□□ -0.9
UBR3-207ENST00000465630 EYA1Q99502 592 aa9.39□□□□□ -0.91
UBR3-207ENST00000465630 MTRQ99707 1265 aa9.39□□□□□ -0.91
UBR3-207ENST00000465630 PTGDRQ13258 359 aa9.38□□□□□ -0.91
UBR3-207ENST00000465630 ZNF516Q92618 1163 aa9.37□□□□□ -0.91
UBR3-207ENST00000465630 SEMA3EO15041 775 aa9.36□□□□□ -0.91
UBR3-207ENST00000465630 HDGFP51858 240 aaKnown RBP9.36□□□□□ -0.91
UBR3-207ENST00000465630 IL21Q9HBE4 155 aa9.35□□□□□ -0.91
UBR3-207ENST00000465630 SLF2Q8IX21 1173 aa9.34□□□□□ -0.91
UBR3-207ENST00000465630 NUTM2FA1L443 756 aa9.33□□□□□ -0.92
UBR3-207ENST00000465630 FAM161AQ3B820 660 aa9.33□□□□□ -0.92
UBR3-207ENST00000465630 P3H3Q8IVL6 736 aa9.33□□□□□ -0.92
UBR3-207ENST00000465630 ADGRG1Q9Y653 693 aa9.32□□□□□ -0.92
UBR3-207ENST00000465630 NKX2-3Q8TAU0 364 aa9.31□□□□□ -0.92
UBR3-207ENST00000465630 COPS2P61201 443 aa9.3□□□□□ -0.92
UBR3-207ENST00000465630 PLCB2Q00722 1185 aa9.3□□□□□ -0.92
UBR3-207ENST00000465630 PPP1R18Q6NYC8 613 aa9.3□□□□□ -0.92
UBR3-207ENST00000465630 DNAJB2P25686 324 aa9.28□□□□□ -0.92
UBR3-207ENST00000465630 NECTIN2Q92692 538 aa9.28□□□□□ -0.92
UBR3-207ENST00000465630 TMEM134Q9H6X4 195 aa9.28□□□□□ -0.92
UBR3-207ENST00000465630 RCCD1A6NED2 376 aa9.27□□□□□ -0.93
UBR3-207ENST00000465630 RBM46Q8TBY0 533 aaKnown RBP9.27□□□□□ -0.93
UBR3-207ENST00000465630 FCHSD2O94868 740 aa9.26□□□□□ -0.93
UBR3-207ENST00000465630 TESPA1A2RU30 521 aaPredicted RBP9.25□□□□□ -0.93
UBR3-207ENST00000465630 RBM26Q5T8P6 1007 aaKnown RBP9.25□□□□□ -0.93
UBR3-207ENST00000465630 PRKD2Q9BZL6 878 aa9.25□□□□□ -0.93
UBR3-207ENST00000465630 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.25□□□□□ -0.93
UBR3-207ENST00000465630 SLC4A3P48751 1232 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms