RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 DDX12PQ92771 950 aa14.77□□□□□ -0.05
SMC4-205ENST00000465563 HCSTQ9UBK5 93 aa14.76□□□□□ -0.05
SMC4-205ENST00000465563 ARIH1Q9Y4X5 557 aaPredicted RBP14.75□□□□□ -0.05
SMC4-205ENST00000465563 BHMG1C9JSJ3 638 aaPredicted RBP14.74□□□□□ -0.05
SMC4-205ENST00000465563 TSHZ2Q9NRE2 1034 aa14.74□□□□□ -0.05
SMC4-205ENST00000465563 KCTD12Q96CX2 325 aaKnown RBP14.73□□□□□ -0.05
SMC4-205ENST00000465563 COL9A1P20849 921 aa14.72□□□□□ -0.05
SMC4-205ENST00000465563 C6orf132Q5T0Z8 1188 aa14.71□□□□□ -0.05
SMC4-205ENST00000465563 RBM33Q96EV2 1170 aaKnown RBP14.7□□□□□ -0.06
SMC4-205ENST00000465563 NBPF3Q9H094 633 aa14.7□□□□□ -0.06
SMC4-205ENST00000465563 MRPL50Q8N5N7 158 aaKnown RBP14.69□□□□□ -0.06
SMC4-205ENST00000465563 NBR1Q14596 966 aa14.68□□□□□ -0.06
SMC4-205ENST00000465563 GOLGA8CPA6NN73 597 aa14.67□□□□□ -0.06
SMC4-205ENST00000465563 PROX2Q3B8N5 592 aa14.67□□□□□ -0.06
SMC4-205ENST00000465563 RABGEF1Q9UJ41 708 aa14.66□□□□□ -0.06
SMC4-205ENST00000465563 EN1Q05925 392 aaPredicted RBP14.64□□□□□ -0.07
SMC4-205ENST00000465563 MAP3K7O43318 606 aa14.63□□□□□ -0.07
SMC4-205ENST00000465563 GRXCR2A6NFK2 248 aa14.61□□□□□ -0.07
SMC4-205ENST00000465563 WNT2BQ93097 391 aa14.61□□□□□ -0.07
SMC4-205ENST00000465563 ONECUT3O60422 494 aaPredicted RBP14.6□□□□□ -0.07
SMC4-205ENST00000465563 KIAA1468Q9P260 1216 aa14.59□□□□□ -0.07
SMC4-205ENST00000465563 PTPN5P54829 565 aa14.58□□□□□ -0.08
SMC4-205ENST00000465563 TSR1Q2NL82 804 aaKnown RBP14.58□□□□□ -0.08
SMC4-205ENST00000465563 THSD4Q6ZMP0 1018 aa14.58□□□□□ -0.08
SMC4-205ENST00000465563 TRIM6-TRIM34B2RNG4 842 aa14.56□□□□□ -0.08
SMC4-205ENST00000465563 PLA2G2EQ9NZK7 142 aa14.56□□□□□ -0.08
SMC4-205ENST00000465563 LAPTM4BQ86VI4 370 aa14.55□□□□□ -0.08
SMC4-205ENST00000465563 ARHGEF1Q92888 912 aaKnown RBP14.54□□□□□ -0.08
SMC4-205ENST00000465563 OSBPP22059 807 aa14.52□□□□□ -0.09
SMC4-205ENST00000465563 PRIM1P49642 420 aaKnown RBP14.52□□□□□ -0.09
SMC4-205ENST00000465563 PLCB2Q00722 1185 aa14.52□□□□□ -0.09
SMC4-205ENST00000465563 ANKK1Q8NFD2 765 aa14.52□□□□□ -0.09
SMC4-205ENST00000465563 CERKQ8TCT0 537 aa14.5□□□□□ -0.09
SMC4-205ENST00000465563 KCNV2Q8TDN2 545 aa14.5□□□□□ -0.09
SMC4-205ENST00000465563 PACS2Q86VP3 889 aa14.49□□□□□ -0.09
SMC4-205ENST00000465563 ZFRQ96KR1 1074 aaKnown RBP14.48□□□□□ -0.09
SMC4-205ENST00000465563 SEPT9Q9UHD8 586 aaPredicted RBP14.48□□□□□ -0.09
SMC4-205ENST00000465563 TSKSQ9UJT2 592 aa14.47□□□□□ -0.09
SMC4-205ENST00000465563 FAM98CQ17RN3 349 aaKnown RBP14.46□□□□□ -0.09
SMC4-205ENST00000465563 PRSS12P56730 875 aa14.45□□□□□ -0.1
SMC4-205ENST00000465563 CDCA7LQ96GN5 454 aa14.45□□□□□ -0.1
SMC4-205ENST00000465563 P3H3Q8IVL6 736 aa14.44□□□□□ -0.1
SMC4-205ENST00000465563 SOWAHBA6NEL2 793 aa14.42□□□□□ -0.1
SMC4-205ENST00000465563 BCAMP50895 628 aa14.42□□□□□ -0.1
SMC4-205ENST00000465563 CDHR5Q9HBB8 845 aa14.42□□□□□ -0.1
SMC4-205ENST00000465563 MLLT3P42568 568 aaPredicted RBP14.39□□□□□ -0.11
SMC4-205ENST00000465563 FAM198AQ9UFP1 575 aa14.38□□□□□ -0.11
SMC4-205ENST00000465563 LRCH3Q96II8 777 aa14.36□□□□□ -0.11
SMC4-205ENST00000465563 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.36□□□□□ -0.11
SMC4-205ENST00000465563 RBM27Q9P2N5 1060 aaKnown RBP14.36□□□□□ -0.11
SMC4-205ENST00000465563 NBPF26B4DH59 902 aa14.35□□□□□ -0.11
SMC4-205ENST00000465563 SMAPO00193 183 aa14.34□□□□□ -0.11
SMC4-205ENST00000465563 TATDN2Q93075 761 aa14.34□□□□□ -0.11
SMC4-205ENST00000465563 NYAP1Q6ZVC0 841 aa14.33□□□□□ -0.12
SMC4-205ENST00000465563 NPDC1Q9NQX5 325 aaPredicted RBP14.33□□□□□ -0.12
SMC4-205ENST00000465563 WBP1LQ9NX94 342 aa14.32□□□□□ -0.12
SMC4-205ENST00000465563 PNMA3Q9UL41 463 aa14.32□□□□□ -0.12
SMC4-205ENST00000465563 HAP1P54257 671 aaPredicted RBP14.31□□□□□ -0.12
SMC4-205ENST00000465563 IFFO2Q5TF58 517 aa14.31□□□□□ -0.12
SMC4-205ENST00000465563 TSR3Q9UJK0 312 aaKnown RBP14.31□□□□□ -0.12
SMC4-205ENST00000465563 C3orf80F5H4A9 247 aa14.29□□□□□ -0.12
SMC4-205ENST00000465563 HPS5Q9UPZ3 1129 aa14.29□□□□□ -0.12
SMC4-205ENST00000465563 PADI6Q6TGC4 694 aa14.28□□□□□ -0.12
SMC4-205ENST00000465563 NUDT18Q6ZVK8 323 aa14.28□□□□□ -0.12
SMC4-205ENST00000465563 TTC13Q8NBP0 860 aa14.28□□□□□ -0.12
SMC4-205ENST00000465563 SEMA3EO15041 775 aa14.26□□□□□ -0.13
SMC4-205ENST00000465563 SAMD7Q7Z3H4 446 aa14.26□□□□□ -0.13
SMC4-205ENST00000465563 HDGFP51858 240 aaKnown RBP14.24□□□□□ -0.13
SMC4-205ENST00000465563 PPP4CP60510 307 aa14.23□□□□□ -0.13
SMC4-205ENST00000465563 ITGBL1O95965 494 aaPredicted RBP14.22□□□□□ -0.13
SMC4-205ENST00000465563 PTGDRQ13258 359 aa14.22□□□□□ -0.13
SMC4-205ENST00000465563 NUTM2FA1L443 756 aa14.21□□□□□ -0.13
SMC4-205ENST00000465563 A0A0G2JS52 829 aa14.17□□□□□ -0.14
SMC4-205ENST00000465563 TESPA1A2RU30 521 aaPredicted RBP14.15□□□□□ -0.14
SMC4-205ENST00000465563 RNF40O75150 1001 aa14.15□□□□□ -0.14
SMC4-205ENST00000465563 EYA1Q99502 592 aa14.15□□□□□ -0.14
SMC4-205ENST00000465563 KDM2AQ9Y2K7 1162 aa14.15□□□□□ -0.14
SMC4-205ENST00000465563 KCNC4Q03721 635 aa14.14□□□□□ -0.15
SMC4-205ENST00000465563 SMYD5Q6GMV2 418 aa14.14□□□□□ -0.15
SMC4-205ENST00000465563 FCHSD2O94868 740 aa14.13□□□□□ -0.15
SMC4-205ENST00000465563 RGS20O76081 388 aa14.12□□□□□ -0.15
SMC4-205ENST00000465563 SWT1Q5T5J6 900 aaKnown RBP14.12□□□□□ -0.15
SMC4-205ENST00000465563 SLF2Q8IX21 1173 aa14.1□□□□□ -0.15
SMC4-205ENST00000465563 NECTIN2Q92692 538 aa14.1□□□□□ -0.15
SMC4-205ENST00000465563 SLC4A3P48751 1232 aa14.09□□□□□ -0.15
SMC4-205ENST00000465563 RBM46Q8TBY0 533 aaKnown RBP14.09□□□□□ -0.15
SMC4-205ENST00000465563 ADGRG1Q9Y653 693 aa14.08□□□□□ -0.16
SMC4-205ENST00000465563 RBM26Q5T8P6 1007 aaKnown RBP14.07□□□□□ -0.16
SMC4-205ENST00000465563 VSIG10Q8N0Z9 540 aa14.06□□□□□ -0.16
SMC4-205ENST00000465563 DNAJB2P25686 324 aa14.05□□□□□ -0.16
SMC4-205ENST00000465563 APLP1P51693 650 aa14.04□□□□□ -0.16
SMC4-205ENST00000465563 TJAP1Q5JTD0 557 aa14.04□□□□□ -0.16
SMC4-205ENST00000465563 HIC1Q14526 733 aa14.03□□□□□ -0.16
SMC4-205ENST00000465563 FAM161AQ3B820 660 aa14.03□□□□□ -0.16
SMC4-205ENST00000465563 MTRQ99707 1265 aa14.02□□□□□ -0.17
SMC4-205ENST00000465563 IL21Q9HBE4 155 aa14.01□□□□□ -0.17
SMC4-205ENST00000465563 TMEM134Q9H6X4 195 aa14□□□□□ -0.17
SMC4-205ENST00000465563 RCCD1A6NED2 376 aa13.99□□□□□ -0.17
SMC4-205ENST00000465563 OATP04181 439 aa13.98□□□□□ -0.17
SMC4-205ENST00000465563 PRR14Q9BWN1 585 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms