RNA–Protein interactions for RNA: ENST00000465450.2

CAPN13-204, Transcript of calpain 13, humanhuman

TSL 5

Gene CAPN13, Length 572 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-204ENST00000465450 SLC4A5Q9BY07 1137 aa12.53□□□□□ -0.4
CAPN13-204ENST00000465450 PPP1R3GB7ZBB8 358 aa12.5□□□□□ -0.41
CAPN13-204ENST00000465450 STAC3Q96MF2 364 aa12.49□□□□□ -0.41
CAPN13-204ENST00000465450 COL9A1P20849 921 aa12.48□□□□□ -0.41
CAPN13-204ENST00000465450 PLCB2Q00722 1185 aa12.47□□□□□ -0.41
CAPN13-204ENST00000465450 NBR1Q14596 966 aa12.47□□□□□ -0.41
CAPN13-204ENST00000465450 RBM33Q96EV2 1170 aaKnown RBP12.47□□□□□ -0.41
CAPN13-204ENST00000465450 C6orf132Q5T0Z8 1188 aa12.45□□□□□ -0.42
CAPN13-204ENST00000465450 BHMG1C9JSJ3 638 aaPredicted RBP12.44□□□□□ -0.42
CAPN13-204ENST00000465450 EN1Q05925 392 aaPredicted RBP12.43□□□□□ -0.42
CAPN13-204ENST00000465450 PROX2Q3B8N5 592 aa12.43□□□□□ -0.42
CAPN13-204ENST00000465450 KCTD12Q96CX2 325 aaKnown RBP12.42□□□□□ -0.42
CAPN13-204ENST00000465450 GRXCR2A6NFK2 248 aa12.4□□□□□ -0.42
CAPN13-204ENST00000465450 MAP3K7O43318 606 aa12.4□□□□□ -0.42
CAPN13-204ENST00000465450 KCNV2Q8TDN2 545 aa12.4□□□□□ -0.42
CAPN13-204ENST00000465450 TSR1Q2NL82 804 aaKnown RBP12.39□□□□□ -0.43
CAPN13-204ENST00000465450 MRPL50Q8N5N7 158 aaKnown RBP12.39□□□□□ -0.43
CAPN13-204ENST00000465450 NBPF3Q9H094 633 aa12.39□□□□□ -0.43
CAPN13-204ENST00000465450 HCSTQ9UBK5 93 aa12.39□□□□□ -0.43
CAPN13-204ENST00000465450 RABGEF1Q9UJ41 708 aa12.38□□□□□ -0.43
CAPN13-204ENST00000465450 PRIM1P49642 420 aaKnown RBP12.37□□□□□ -0.43
CAPN13-204ENST00000465450 ARHGEF1Q92888 912 aaKnown RBP12.37□□□□□ -0.43
CAPN13-204ENST00000465450 GOLGA8CPA6NN73 597 aa12.35□□□□□ -0.43
CAPN13-204ENST00000465450 TRIM6-TRIM34B2RNG4 842 aa12.33□□□□□ -0.44
CAPN13-204ENST00000465450 OSBPP22059 807 aa12.33□□□□□ -0.44
CAPN13-204ENST00000465450 KIAA1468Q9P260 1216 aa12.33□□□□□ -0.44
CAPN13-204ENST00000465450 ONECUT3O60422 494 aaPredicted RBP12.32□□□□□ -0.44
CAPN13-204ENST00000465450 WNT2BQ93097 391 aa12.32□□□□□ -0.44
CAPN13-204ENST00000465450 P3H3Q8IVL6 736 aa12.31□□□□□ -0.44
CAPN13-204ENST00000465450 THSD4Q6ZMP0 1018 aa12.3□□□□□ -0.44
CAPN13-204ENST00000465450 HAP1P54257 671 aaPredicted RBP12.29□□□□□ -0.44
CAPN13-204ENST00000465450 PTPN5P54829 565 aa12.29□□□□□ -0.44
CAPN13-204ENST00000465450 LAPTM4BQ86VI4 370 aa12.28□□□□□ -0.44
CAPN13-204ENST00000465450 CDHR5Q9HBB8 845 aa12.28□□□□□ -0.44
CAPN13-204ENST00000465450 MLLT3P42568 568 aaPredicted RBP12.27□□□□□ -0.45
CAPN13-204ENST00000465450 SEPT9Q9UHD8 586 aaPredicted RBP12.27□□□□□ -0.45
CAPN13-204ENST00000465450 TSKSQ9UJT2 592 aa12.27□□□□□ -0.45
CAPN13-204ENST00000465450 CERKQ8TCT0 537 aa12.26□□□□□ -0.45
CAPN13-204ENST00000465450 CDCA7LQ96GN5 454 aa12.25□□□□□ -0.45
CAPN13-204ENST00000465450 PRSS12P56730 875 aa12.24□□□□□ -0.45
CAPN13-204ENST00000465450 ANKK1Q8NFD2 765 aa12.24□□□□□ -0.45
CAPN13-204ENST00000465450 PACS2Q86VP3 889 aa12.23□□□□□ -0.45
CAPN13-204ENST00000465450 ZFRQ96KR1 1074 aaKnown RBP12.22□□□□□ -0.45
CAPN13-204ENST00000465450 PLA2G2EQ9NZK7 142 aa12.22□□□□□ -0.45
CAPN13-204ENST00000465450 FAM98CQ17RN3 349 aaKnown RBP12.21□□□□□ -0.45
CAPN13-204ENST00000465450 FAM198AQ9UFP1 575 aa12.21□□□□□ -0.45
CAPN13-204ENST00000465450 BCAMP50895 628 aa12.19□□□□□ -0.46
CAPN13-204ENST00000465450 SOWAHBA6NEL2 793 aa12.18□□□□□ -0.46
CAPN13-204ENST00000465450 NPDC1Q9NQX5 325 aaPredicted RBP12.18□□□□□ -0.46
CAPN13-204ENST00000465450 SEMA3EO15041 775 aa12.17□□□□□ -0.46
CAPN13-204ENST00000465450 RBM27Q9P2N5 1060 aaKnown RBP12.17□□□□□ -0.46
CAPN13-204ENST00000465450 NBPF26B4DH59 902 aa12.15□□□□□ -0.46
CAPN13-204ENST00000465450 C3orf80F5H4A9 247 aa12.15□□□□□ -0.46
CAPN13-204ENST00000465450 SMAPO00193 183 aa12.15□□□□□ -0.46
CAPN13-204ENST00000465450 KDM2AQ9Y2K7 1162 aa12.15□□□□□ -0.46
CAPN13-204ENST00000465450 TATDN2Q93075 761 aa12.14□□□□□ -0.47
CAPN13-204ENST00000465450 PNMA3Q9UL41 463 aa12.14□□□□□ -0.47
CAPN13-204ENST00000465450 PADI6Q6TGC4 694 aa12.13□□□□□ -0.47
CAPN13-204ENST00000465450 LRCH3Q96II8 777 aa12.12□□□□□ -0.47
CAPN13-204ENST00000465450 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.12□□□□□ -0.47
CAPN13-204ENST00000465450 NUDT18Q6ZVK8 323 aa12.11□□□□□ -0.47
CAPN13-204ENST00000465450 TTC13Q8NBP0 860 aa12.11□□□□□ -0.47
CAPN13-204ENST00000465450 WBP1LQ9NX94 342 aa12.09□□□□□ -0.47
CAPN13-204ENST00000465450 NUTM2FA1L443 756 aa12.08□□□□□ -0.48
CAPN13-204ENST00000465450 PTGDRQ13258 359 aa12.08□□□□□ -0.48
CAPN13-204ENST00000465450 SAMD7Q7Z3H4 446 aa12.08□□□□□ -0.48
CAPN13-204ENST00000465450 HPS5Q9UPZ3 1129 aa12.08□□□□□ -0.48
CAPN13-204ENST00000465450 TESPA1A2RU30 521 aaPredicted RBP12.07□□□□□ -0.48
CAPN13-204ENST00000465450 TSR3Q9UJK0 312 aaKnown RBP12.06□□□□□ -0.48
CAPN13-204ENST00000465450 NYAP1Q6ZVC0 841 aa12.05□□□□□ -0.48
CAPN13-204ENST00000465450 VSIG10Q8N0Z9 540 aa12.05□□□□□ -0.48
CAPN13-204ENST00000465450 IFFO2Q5TF58 517 aa12.02□□□□□ -0.49
CAPN13-204ENST00000465450 PPP4CP60510 307 aa12.01□□□□□ -0.49
CAPN13-204ENST00000465450 SMYD5Q6GMV2 418 aa12.01□□□□□ -0.49
CAPN13-204ENST00000465450 FCHSD2O94868 740 aa12□□□□□ -0.49
CAPN13-204ENST00000465450 RBM26Q5T8P6 1007 aaKnown RBP12□□□□□ -0.49
CAPN13-204ENST00000465450 EYA1Q99502 592 aa12□□□□□ -0.49
CAPN13-204ENST00000465450 RNF40O75150 1001 aa11.98□□□□□ -0.49
CAPN13-204ENST00000465450 ITGBL1O95965 494 aaPredicted RBP11.98□□□□□ -0.49
CAPN13-204ENST00000465450 HDGFP51858 240 aaKnown RBP11.98□□□□□ -0.49
CAPN13-204ENST00000465450 SWT1Q5T5J6 900 aaKnown RBP11.97□□□□□ -0.49
CAPN13-204ENST00000465450 ADGRG1Q9Y653 693 aa11.96□□□□□ -0.49
CAPN13-204ENST00000465450 FAM161AQ3B820 660 aa11.94□□□□□ -0.5
CAPN13-204ENST00000465450 A0A0G2JS52 829 aa11.93□□□□□ -0.5
CAPN13-204ENST00000465450 HIC1Q14526 733 aa11.93□□□□□ -0.5
CAPN13-204ENST00000465450 RBM46Q8TBY0 533 aaKnown RBP11.93□□□□□ -0.5
CAPN13-204ENST00000465450 SLF2Q8IX21 1173 aa11.92□□□□□ -0.5
CAPN13-204ENST00000465450 DNAJB2P25686 324 aa11.91□□□□□ -0.5
CAPN13-204ENST00000465450 KCNC4Q03721 635 aa11.91□□□□□ -0.5
CAPN13-204ENST00000465450 GPR37O15354 613 aa11.9□□□□□ -0.5
CAPN13-204ENST00000465450 SLC4A3P48751 1232 aa11.88□□□□□ -0.51
CAPN13-204ENST00000465450 APLP1P51693 650 aa11.88□□□□□ -0.51
CAPN13-204ENST00000465450 NECTIN2Q92692 538 aa11.88□□□□□ -0.51
CAPN13-204ENST00000465450 TMEM134Q9H6X4 195 aa11.88□□□□□ -0.51
CAPN13-204ENST00000465450 RCCD1A6NED2 376 aa11.87□□□□□ -0.51
CAPN13-204ENST00000465450 GNPATO15228 680 aa11.87□□□□□ -0.51
CAPN13-204ENST00000465450 FECHP22830 423 aa11.87□□□□□ -0.51
CAPN13-204ENST00000465450 GPIHBP1Q8IV16 184 aa11.86□□□□□ -0.51
CAPN13-204ENST00000465450 TJAP1Q5JTD0 557 aa11.85□□□□□ -0.51
CAPN13-204ENST00000465450 PXYLP1Q8TE99 480 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms